| 2017 |
Full-length RTN3 (long isoform) acts as a selective autophagy receptor for ER-phagy of tubular ER. Oligomerization of the long isoform is sufficient to trigger fragmentation of ER tubules. The long N-terminal region of RTN3 contains multiple LC3-interacting regions (LIR motifs), and binding to LC3s/GABARAPs is essential for tubule fragmentation and lysosomal delivery. RTN3-mediated ER-phagy requires conventional autophagy components but is independent of FAM134B. |
Selective autophagy assays, LC3 co-immunoprecipitation, LIR motif identification/mutagenesis, live imaging, lysosomal delivery assays, genetic epistasis with FAM134B KO |
eLife |
High |
28617241
|
| 2006 |
RTN3 physically interacts with BACE1 via the transmembrane region of BACE1, and overexpression of RTN3 inhibits BACE1 activity, reducing Abeta40 and Abeta42 secretion by 30–50%. RTN3 also interacts with BACE2. |
Co-immunoprecipitation in SH-SY5Y and HEK293 cells, proteomic identification, BACE1 ectodomain deletion mutant binding assay, Abeta secretion assay |
The European journal of neuroscience |
High |
16965550
|
| 2007 |
RTN3 adopts an omega-shaped membrane topology with two long transmembrane domains and both N- and C-termini facing the cytosolic side. The first transmembrane domain dictates membrane integration. Subtle alterations in this topology disrupt RTN3 binding to BACE1 and abolish its inhibitory effects on BACE1 activity. |
Membrane topology mapping assays, site-directed mutagenesis, co-immunoprecipitation, BACE1 activity assay |
The Journal of biological chemistry |
High |
17699523
|
| 2014 |
RTN3 deficiency in mice increases BACE1 protein levels and enhances APP processing at the beta-secretase site, leading to increased amyloid deposition in Alzheimer's mouse models. This demonstrates RTN3 negatively regulates BACE1 protein stability and activity in vivo. |
RTN3-null mouse generation, biochemical analysis of BACE1 levels and APP processing, histological analysis of amyloid deposition in RTN3-null x AD model mice |
The Journal of neuroscience |
High |
25319692
|
| 2009 |
RTN3 overexpression reduces amyloid deposition in cortex and hippocampus of APP/PS1 mice, and this is associated with retention of BACE1 in the ER compartment where APP cleavage is less favored, altering BACE1 intracellular trafficking. RTN3 aggregates in dystrophic neurites offset this inhibitory effect. |
Triple transgenic mouse model (RTN3 overexpressor x APP/PS1), amyloid burden quantification, BACE1 intracellular localization studies, immunohistochemistry |
The Journal of neuroscience |
High |
19625507
|
| 2005 |
RTN3 (identified as ASYIP) forms a complex with ASY/Nogo-B (RTN4) in human cells; both hydrophobic transmembrane regions of RTN3 are required for this association. RTN3 co-localizes with ASY/Nogo-B in the ER, as shown by immunofluorescence. RTN3 contains a double-lysine ER retrieval motif at its C-terminus. |
Yeast two-hybrid cloning, co-immunoprecipitation in human cells, immunofluorescence co-localization, deletion/mutational analysis |
Journal of cellular physiology |
Medium |
12811824
|
| 2005 |
RTN3 overexpression triggers ER overload response (EOR)-induced apoptosis through depletion of ER Ca2+ stores and sustained elevation of cytosolic Ca2+, activating caspase-12 and mitochondrial dysfunction. Overexpressed RTN3 also induces iNOS upregulation via Ca2+ release and reactive oxygen intermediates as a protective feedback. |
Overexpression in HeLa cells, Ca2+ measurement, caspase-12 activation assay, mitochondrial dysfunction assay, iNOS reporter/Western blot |
Journal of cellular physiology |
Medium |
15799019
|
| 2006 |
Endogenous FADD is recruited by ER-bound RTN3 to the ER membrane, initiating caspase-8 cascade including Bid processing and cytochrome c release from mitochondria. Dominant-negative FADD (DD domain) abolishes these RTN3-mediated caspase-8 cascade events. Endogenous FADD is also recruited by endogenous RTN3 upon tunicamycin stimulation. |
Co-immunoprecipitation of endogenous proteins, dominant-negative FADD overexpression, caspase-8 activation assay, cytochrome c release assay, tunicamycin stimulation |
Apoptosis |
Medium |
17031492
|
| 2007 |
RTN3 interacts with Bcl-2 on the ER membrane. Overexpressed Bcl-2 reduces RTN3-induced apoptosis. Increased endogenous RTN3 in the microsomal fraction (upon tunicamycin) enhances Bcl-2 localization to both microsomal and mitochondrial fractions, potentiating Bcl-2 anti-apoptotic activity. |
Co-immunoprecipitation, subcellular fractionation, apoptosis assay, Bcl-2 stable overexpression in HeLa cells |
Cell biology international |
Medium |
17379544
|
| 2009 |
RTN3 overexpression upregulates death receptor DR5 surface protein and downregulates c-FLIP, sensitizing cells to TRAIL-mediated apoptosis. DR5 siRNA or DR5/Fc chimera blocks RTN3-mediated TRAIL sensitization, establishing DR5 as the primary mediator. RTN3 also enhances TNF-alpha and Fas-mediated apoptosis. |
Stable RTN3 overexpression, DR5 siRNA knockdown, DR5/Fc chimera blocking, flow cytometry for DR4/DR5 surface levels, TRAIL apoptosis assay, c-FLIP Western blot |
Cancer letters |
Medium |
19250737
|
| 2009 |
RTN3 (CRELD1 binding partner) is recruited by CRELD1 interaction, which shifts RTN3 localization from the ER to the plasma membrane and moderately decreases RTN3-mediated apoptotic activity. CRELD1 interaction also partially suppresses tunicamycin-induced apoptosis. |
Co-immunoprecipitation of ectopic and endogenous RTN3 with CRELD1, immunofluorescence localization, apoptosis assay |
Molecular and cellular biochemistry |
Low |
19521671
|
| 2017 |
RTN3 expression is induced by cold/hypothermia and is a downstream effector of RBM3-mediated neuroprotection. RBM3 binds to RTN3 mRNA to drive increased RTN3 translation. RTN3 knockdown in mice eliminates cooling-induced neuroprotection; lentiviral RTN3 overexpression independently prevents synaptic loss and cognitive deficits in a mouse neurodegeneration model downstream of RBM3. |
Translatome profiling, RBM3 RNA-binding assay, RTN3 knockdown in mice (lentiviral), lentiviral RTN3 overexpression in mouse neurodegeneration model, cognitive/synaptic phenotyping |
Current biology |
High |
28238655
|
| 2018 |
RTN3 interacts with HSPA5 (GRP78/BiP), and this interaction increases SREBP-1c and AMPK activity, promoting triglyceride biosynthesis and lipid droplet expansion. RTN3 transgenic mice develop obesity and hypertriglyceridemia; RTN3-null mice have reduced triglyceride accumulation. |
RTN3 transgenic and null mouse models, co-immunoprecipitation with HSPA5, SREBP-1c and AMPK activity assays, 3T3L1 cell culture, C. elegans genetic models |
Circulation |
Medium |
29716941
|
| 2018 |
BAP31 is a binding partner of RTN3 that stabilizes RTN3 monomer. BAP31 knockout in hippocampal neurons decreases RTN3 monomer availability, increases RTN3 aggregates, and consequently enhances BACE1-mediated APP processing and amyloid plaque formation. |
Co-immunoprecipitation of BAP31 and RTN3, conditional BAP31-KO mouse crossed with APP/PS1 AD model, primary hippocampal neuron culture, Western blot for RTN3 aggregates and BACE1 processing |
FASEB journal |
Medium |
30596517
|
| 2021 |
RTN3 is upregulated during RNA viral infection and acts as a negative regulator of RIG-I antiviral signaling. RTN3 aggregates on the ER and interacts with both TRIM25 and RIG-I, impairing K63-linked polyubiquitination of RIG-I, resulting in inhibition of IRF3 and NF-κB activation. RTN3 overexpression in mice reduces neutrophil infiltration and inflammatory damage upon VSV challenge. |
Co-immunoprecipitation of RTN3 with TRIM25 and RIG-I, ubiquitination assay (K63-linked), IRF3/NF-κB reporter assay, RTN3-overexpressing mouse model challenged with VSV, immunohistochemistry |
eLife |
High |
34313226
|
| 2022 |
RTN3 deficiency in kidney proximal tubular epithelial cells activates the IGF2-JAK2-STAT3 pathway through interaction with GPBP1, leading to collagen biosynthesis upregulation and mitochondrial dysfunction, phenocopying chronic kidney disease and fibrosis. |
RTN3-null mouse model, co-immunoprecipitation with GPBP1, IGF2-JAK2-STAT3 pathway analysis, primary proximal tubular epithelial cells, HEK293 cells in vitro |
Experimental & molecular medicine |
Medium |
35596061
|
| 2023 |
RTN3 directly binds FABP5 to facilitate directed transport of fatty acids to the ER, promoting lipid droplet biogenesis in a DGAT2-dependent manner in cardiomyocytes. Lipid overload-induced RTN3 upregulation is driven by C/EBPα, which binds the RTN3 promoter. |
Co-immunoprecipitation of RTN3 and FABP5, gain/loss-of-function in cardiomyocytes, DGAT2 inhibition, C/EBPα promoter binding assay (ChIP), HFD mouse model |
Cell death and differentiation |
Medium |
38017147
|
| 2023 |
RTN3 interacts with GRP78 (HSPA5) in hepatocytes, and increased RTN3 inhibits the AMPK-IDH2 pathway, leading to mitochondrial dysfunction and lipid accumulation phenocopying NAFLD. RTN3 knockout relieves fatty liver and mitochondrial dysfunction. |
Co-immunoprecipitation with GRP78, AMPK and IDH2 activity assays, RTN3-null mouse model, primary hepatocytes, L02 cell line, C. elegans strain, HFD model |
MedComm |
Medium |
36925557
|
| 2024 |
RTN3 deficiency disrupts the RTN3-HSPA9-VDAC2 complex at mitochondria-associated membranes (MAMs), impairing ER-mitochondrion contact and causing mitochondrial dysfunction that exacerbates cisplatin-induced acute kidney injury. |
Co-immunoprecipitation of RTN3, HSPA9, and VDAC2, RTN3-null mouse model with cisplatin treatment, primary renal tubular epithelial cells, HK2 cell line, MAM analysis |
Mitochondrion |
Medium |
38336146
|
| 2024 |
In socially isolated AD mice, RTN3 aggregates in presynaptic regions and disturbs mossy fibre bouton formation by recruiting multiple mitochondrial and vesicle-related proteins. RTN3 aggregation also recruits PP2A B subunits, suppressing PP2A activity and inducing tau hyperphosphorylation, which further elevates RTN3 in a feedforward cycle. |
RTN3 interactome analysis (AI-assisted molecular docking), in vivo mouse model (social isolation + AD), PP2A activity assay, tau phosphorylation analysis, senktide treatment to disrupt RTN3 interactions |
Protein & cell |
Medium |
38011644
|
| 2025 |
RTN3 interacts with CRTH2 in lung fibroblasts; RTN3 deficiency reduces ER-anchored CRTH2 (which antagonizes collagen biosynthesis) and simultaneously reduces autophagy-mediated degradation of CRTH2 in macrophages (where CRTH2 activates profibrotic differentiation), resulting in aggravated pulmonary fibrosis. |
Co-immunoprecipitation of RTN3 and CRTH2, RTN3-null mouse model with bleomycin treatment, lung fibroblast and alveolar macrophage studies, autophagy assay |
Molecular medicine |
Medium |
39972424
|
| 2011 |
RTN3 interacts with Ras at the ER, as demonstrated by confocal co-localization and co-immunoprecipitation. RTN3 upregulation during HSV mutant infection correlates with decreased Ras on the plasma membrane. |
Confocal co-localization, co-immunoprecipitation, siRNA knockdown of RTN3, Western blot and flow cytometry for Ras distribution |
Cancer biology & therapy |
Low |
17218780
|
| 2026 |
RTN3 directly interacts with DHCR7 and promotes its ubiquitination. RTN3 downregulation stabilizes DHCR7, elevating cholesterol concentration and activating the EGFR/ERK pathway in thyroid cancer. |
Co-immunoprecipitation of RTN3 and DHCR7, ubiquitination assay, RTN3 loss-of-function experiments, EGFR/ERK pathway activity assay, Simvastatin rescue |
Cell death & disease |
Medium |
41813657
|
| 2023 |
RTN3 and RTN4 are required for the formation of SARS-CoV-2 replication organelles through direct interaction with viral proteins NSP3 and NSP4. |
Co-immunoprecipitation/interaction studies with viral NSP3/NSP4, RTN3/RTN4 loss-of-function, replication organelle formation assay (as described by Williams et al., cited in this commentary) |
The Journal of cell biology |
Medium |
37318453
|
| 2018 |
RTN3 variant T39M (c.116C>T) found in early-onset AD patients causes impaired axonal transport of BACE1 when overexpressed in cultured neurons. The c.-8G>T 5'-UTR variant reduces RTN3 expression. |
Luciferase reporter assay for expression, kymograph analysis of BACE1-RFP particle mobility in neurons transfected with WT or variant RTN3 |
Human genetics |
Medium |
29356939
|