| 2019 |
YTHDF2 binds m6A-modified mRNAs and decreases their half-life; in AML, YTHDF2 targets include Tnfrsf2 (TNF receptor) mRNA, whose upregulation upon Ythdf2 deficiency primes leukemic stem cells for apoptosis. |
m6A-seq, RNA stability assays, conditional knockout mouse models, human AML xenograft transplantation |
Cell stem cell |
High |
31031138
|
| 2018 |
YTHDF2 directly binds m6A modification sites in the EGFR 3'-UTR and promotes EGFR mRNA degradation, suppressing MEK/ERK activation in hepatocellular carcinoma cells. |
m6A-RIP, RNA stability assay, overexpression/knockdown with downstream signaling readouts |
Cancer letters |
Medium |
30423408
|
| 2019 |
YTHDF2 promotes decay of m6A-containing IL11 and SERPINE2 mRNAs in hepatocytes, and its transcription is repressed by HIF-2α; administration of a HIF-2α antagonist restores YTHDF2-dependent mRNA decay. |
m6A-IP with high-throughput sequencing, RNA stability assay, conditional hepatocyte knockout, HIF-2α antagonist (PT2385) treatment |
Molecular cancer |
High |
31735169
|
| 2021 |
EGFR/SRC/ERK signaling phosphorylates YTHDF2 at serine 39 and threonine 381, stabilizing YTHDF2 protein; stabilized YTHDF2 promotes m6A-dependent decay of LXRA and HIVEP2 mRNAs in glioblastoma. |
Phosphorylation mapping by mass spectrometry, site-directed mutagenesis, RIP, m6A sequencing, in vivo tumorigenesis assay |
Nature communications |
High |
33420027
|
| 2018 |
Conditional knockout of mouse Ythdf2 increases HSC numbers; knockdown of human YTHDF2 expands cord blood HSCs ex vivo by stabilizing m6A-marked mRNAs encoding transcription factors (e.g., Tal1) critical for self-renewal. |
Conditional KO mouse, limiting dilution transplantation, m6A-seq in HSPCs, siRNA knockdown rescue |
Cell research |
High |
30065315
|
| 2021 |
YTHDF2 is SUMOylated in vivo and in vitro at K571; SUMOylation (induced by hypoxia) increases YTHDF2 binding affinity for m6A-modified mRNAs without affecting ubiquitination or localization, leading to enhanced mRNA degradation. |
In vitro SUMOylation assay, in vivo SUMOylation, site-directed mutagenesis (K571), m6A-RIP, mRNA stability assay |
Nucleic acids research |
High |
33577677
|
| 2021 |
FBW7 E3 ubiquitin ligase directly interacts with YTHDF2, inducing its proteasomal degradation and thereby reducing YTHDF2-mediated BMF mRNA decay in ovarian cancer. |
IP-mass spectrometry, co-IP, western blot, in vitro and in vivo tumorigenesis assays, m6A-RIP-seq, RNA-seq |
Molecular cancer |
High |
33658012
|
| 2019 |
YTHDF2 recognizes N1-methyladenosine (m1A)-modified sequences in addition to m6A; YTHDF2 depletion increases abundance of endogenously m1A-modified transcripts, indicating YTHDF2-dependent destabilization of m1A-containing mRNAs. |
Chemical proteomics pulldown, recombinant protein binding assay, YTHDF2 knockdown with transcript-level quantification |
ACS chemical biology |
Medium |
31815430
|
| 2020 |
YTHDF2 promotes mRNA decay of WEE1 (a negative cell cycle regulator containing m6A) to accelerate mitotic entry; CDK1 activity stabilizes YTHDF2 protein, forming a CDK1–YTHDF2–WEE1 feedforward loop; CUL1, CUL4A, DDB1, and SKP2 E3 ligase components mediate YTHDF2 proteolysis. |
YTHDF2 siRNA depletion, m6A-seq, RNA stability assay, CDK1 inhibitor treatment, co-IP with E3 components |
PLoS biology |
High |
32267835
|
| 2020 |
YTHDF2 and YTHDF3 are both required for somatic cell reprogramming; YTHDF2 recruits the CCR4-NOT deadenylase complex to promote deadenylation and mRNA clearance of somatic genes (e.g., Tead2, Tgfb1), facilitating mesenchymal-to-epithelial transition during iPSC generation. |
CRISPR/siRNA KD of Ythdf2/3 in reprogramming assay, scRNA-seq, co-IP with CCR4-NOT, mRNA stability assay |
Cell reports |
High |
32905781
|
| 2021 |
YTHDF2 recognizes m6A-modified PER1 and TP53 mRNAs and promotes their degradation, contributing to ocular melanoma tumorigenesis driven by elevated histone lactylation. |
m6A-RIP, RNA stability assay, overexpression/knockdown in vitro and in vivo |
Genome biology |
Medium |
33726814
|
| 2021 |
YTHDF2 is required for TNBC cell survival; disrupting YTHDF2-dependent mRNA degradation stabilizes MAPK pathway mRNAs, inducing EMT and increasing global translation, ultimately causing ER stress-induced apoptosis. |
Pooled CRISPR-Cas9 screen, eCLIP, m6A-seq, scRibo-STAMP, in vivo tumor models |
Molecular cell |
High |
34216543
|
| 2023 |
O-GlcNAcylation of YTHDF2 at serine 263 (by OGT) enhances its protein stability by inhibiting ubiquitination; O-GlcNAcylated YTHDF2 stabilizes MCM2 and MCM5 mRNAs in an m6A-dependent manner to promote cell cycle progression. |
Co-IP, mass spectrometry, site-directed mutagenesis (S263), OGT inhibitor treatment, MeRIP, RNA stability assay |
Signal transduction and targeted therapy |
High |
36765030
|
| 2021 |
Ythdf2-deficient HSCs chronically upregulate multiple m6A-modified inflammation-related transcripts, activating proinflammatory pathways; YTHDF2 is required to protect HSCs from inflammation-induced dysfunction and experimentally induced inflammation increases YTHDF2 expression. |
Conditional Ythdf2 KO mouse, serial transplantation, transcriptomic profiling, experimental inflammation induction |
The Journal of experimental medicine |
High |
33156926
|
| 2023 |
YTHDF2 deficiency in tumor-associated macrophages (TAMs) reprograms them toward an antitumoral phenotype by targeting IFN-γ–STAT1 signaling; YTHDF2 expression in TAMs is regulated by IL-10–STAT3 signaling. |
Myeloid-specific Ythdf2 KO, flow cytometry, in vivo tumor models, STAT1/STAT3 signaling pathway analyses, TLR9-siRNA targeting |
Nature immunology |
High |
36658237
|
| 2023 |
Ionizing radiation induces YTHDF2 expression in MDSCs via NF-κB signaling; YTHDF2 in turn directly binds and degrades transcripts encoding negative regulators of NF-κB, creating an IR–YTHDF2–NF-κB feedforward circuit. |
Myeloid-specific Ythdf2 KO, RNA-seq, m6A-RIP, in vivo tumor irradiation models, NF-κB inhibitor treatment |
Cancer cell |
High |
37236197
|
| 2019 |
YTHDF2 knockdown in LPS-stimulated macrophages increases mRNA stability of MAP2K4 and MAP4K4, activating MAPK and NF-κB signaling to enhance proinflammatory cytokine expression. |
siRNA knockdown, mRNA stability assay, signaling pathway inhibitors, cytokine measurement |
International journal of molecular sciences |
Medium |
30875984
|
| 2022 |
X-ray crystallography of small-molecule fragment ligands bound to the YTH domain of YTHDF2 revealed the m6A-binding pocket; fragment ligands compete with m6A-RNA for binding. |
X-ray crystallography, fluorescence-based competitive binding assay |
ACS medicinal chemistry letters |
High |
36110386
|
| 2021 |
YTHDF2 mediates decay of m6A-modified CBS mRNA by binding within its CDS; in gastric cancer under hypoxia, lncRNA CBSLR interacts with YTHDF2 to enhance its binding to CBS mRNA, reducing CBS protein levels and leading to ferroptosis resistance. |
RIP, m6A-RIP, RNA stability assay, lncRNA pulldown, in vitro and in vivo cancer models |
Journal of advanced research |
Medium |
35499052
|
| 2020 |
Mouse Ythdf2 knockout in spermatogonia leads to downregulated matrix metallopeptidase expression (Mmp3, Mmp13, Adamts1, Adamts9); m6A-IP-PCR and RIP-PCR confirm YTHDF2 binds and promotes degradation of these m6A-marked mRNAs, regulating cell adhesion and proliferation. |
CRISPR/Cas9 KO in spermatogonia, m6A-IP-PCR, RIP-PCR, rescue with Mmp13 inhibition |
Cell death & disease |
Medium |
31959747
|
| 2023 |
YTHDF2 directly binds the m6A-modified CDS of DDX58 (RIG-I) mRNA and promotes its degradation; YTHDF2 depletion in bladder cancer stabilizes RIG-I, activating innate immune signaling and recruiting CD8+ T cells. |
MeRIP-seq, RNA-seq, RIP, RNA stability assay, in vivo orthotopic tumor model |
Cancer research |
High |
36939388
|
| 2024 |
YTHDF2 facilitates translation of m6A-modified ETV5 mRNA by recognizing its 5'-UTR m6A and recruiting eIF3B, elevating ETV5 expression which transcriptionally induces PD-L1 and VEGFA in HCC. |
MeRIP-seq, RIP, co-IP with eIF3B, polysome profiling, in vivo HCC models |
Advanced science |
High |
38247171
|
| 2022 |
YTHDF2 acts as a B cell-intrinsic factor required for GC B cell fate commitment; Ythdf2-deficient B cells fail to enter GCs because they cannot attenuate the plasmablast genetic program; YTHDF2 targets m6A-methylated plasmablast-regulating transcripts for decay. |
Conditional B-cell Ythdf2 KO, scRNA-seq, YTHDF2 binding site analysis, in vivo GC response |
Cell reports |
High |
35508130
|
| 2023 |
YTHDF2 promotes miR-126 maturation from pre-miR-126 by recognizing m6A modification within pre-miR-126 and recruiting AGO2, a regulator of pre-miRNA processing, in AML cells. |
RIP, m6A-RIP on pre-miRNA, AGO2 co-IP, rescue with miR-126 overexpression |
Genes & diseases |
Medium |
37588203
|
| 2021 |
Germ cell-specific Ythdf2 knockout mice are male sterile; YTHDF2 mediates timely clearance of phase-specific m6A-marked transcripts during spermatogenesis (differentiated spermatogonia to pachytene spermatocyte transition); loss of YTHDF2 leads to persistence of mRNAs mainly enriched in transcription regulation. |
Conditional KO (Vasa-Cre, Stra8-Cre), RNA-seq, YTHDF2-RIP-seq, MeRIP-qPCR, sperm functional assays |
Cell proliferation |
High |
34850470
|
| 2023 |
HSP90β physically interacts with both YTHDF2 and the E3 ligase STUB1 in the cytoplasm, competitively inhibiting STUB1-mediated ubiquitination and degradation of YTHDF2, thereby stabilizing YTHDF2 protein in HCC. |
Co-IP, domain-mapping co-IP, ubiquitination assay, HSP90 inhibitor treatment |
Advanced science |
Medium |
37515378
|
| 2021 |
PBRM1 (SWI/SNF component) interacts with YTHDF2 and is required for YTHDF2 binding to m6A-modified HIF-1α mRNA; YTHDF2 promotes HIF-1α mRNA translation rather than decay, and YTHDF2 depletion reduces HIF-1α protein. |
Co-IP, polysome/translation assay, m6A-RIP, siRNA depletion |
Cells |
Medium |
34200988
|
| 2024 |
YTHDF2 promotes nuclear nascent RNA synthesis in CD8+ T cells in an m6A-recognition-dependent manner and interacts with IKZF1/3 to sustain transcription of their target genes; nuclear YTHDF2 also orchestrates chromatin changes promoting T cell polyfunctionality. |
T cell-specific KO, ChIP-seq, m6A-seq, YTHDF2 co-IP with IKZF1/3, nascent RNA assays, in vivo tumor models with lenalidomide rescue |
Nature communications |
High |
39500904
|
| 2024 |
YTHDF2 functions as a dual reader: it destabilizes m6A-modified mRNAs (canonical) while stabilizing m5C-modified mRNAs by recruiting PABPC1, thereby enhancing expression and ATP synthesis in B cell malignancies. |
RIP-seq, m5C-seq, co-IP with PABPC1, mRNA stability assays, YTHDF2 overexpression/KO in B cell transformation models |
Cell |
High |
39694037
|
| 2023 |
YTHDF2 promotes degradation of Hmox1 (heme oxygenase 1) mRNA in an m6A-dependent manner in alveolar macrophages, and myeloid-specific Ythdf2 KO elevates Hmox1, attenuating alternative macrophage activation and protecting from pulmonary hypertension. |
Myeloid-specific Ythdf2 KO (Lyz2-Cre), m6A-RIP, mRNA stability assay, Hmox1 inhibitor rescue, in vivo PH model |
Redox biology |
High |
36801705
|
| 2024 |
YTHDF2 promotes m6A-dependent decay of TGF-β signaling pathway component mRNAs (ligands, receptors, transcription regulators) in hippocampal NSCs; Ythdf2 deletion elevates TGF-β signaling and increases quiescence acquisition. |
Conditional Ythdf2 KO in NSCs, m6A-seq, YTHDF2-RIP-seq, mRNA decay profiling, TGF-β pathway inhibitor rescue |
Cell stem cell |
High |
39476834
|
| 2024 |
YTHDF2 forms a complex with eIF3F and DDX1 to enhance translation of m6A-modified mRNAs encoding microtubule-associated proteins, driving cancer progression and paclitaxel resistance independently of RNA decay. |
Co-IP (YTHDF2-eIF3F, YTHDF2-DDX1), polysome profiling, m6A-seq, RNA stability assay (ruling out decay), in vivo tumor models, virtual screening for inhibitor |
Molecular cell |
High |
40480228
|
| 2024 |
YTHDF2 stabilizes Cx3cl1 (CX3CL1) mRNA in an m6A-dependent manner in peritumoral hepatocytes, facilitating CD8+ T cell recruitment; oxaliplatin upregulates YTHDF2 expression via cGAS-STING signaling. |
Liver-specific Ythdf2 KO mouse, tumor-bearing model, m6A-RIP, RNA stability assay, cGAS-STING pathway analysis |
Molecular cancer |
Medium |
39237909
|
| 2024 |
Smooth muscle cell-specific Ythdf2 deficiency ameliorates pulmonary vascular remodeling; Ythdf2 paradoxically stabilizes Myadm mRNA in an m6A-dependent manner in PASMCs, promoting cell proliferation via suppression of the cell cycle inhibitor p21. |
SM-specific Ythdf2 KO (SM22α-Cre), proteomics, m6A-seq, RIP, mRNA stability assay, in vivo PH model |
Hypertension |
High |
38832511
|
| 2024 |
YTHDF2 controls mRNA stability of the ubiquitin ligase ASB2 in skeletal muscle; muscle-specific YTHDF2 deletion impairs postnatal muscle growth and hypertrophic response by activating SMAD3-dependent TGF-β anti-growth program. |
Muscle-specific Ythdf2 KO, m6A-RIP, mRNA stability assay, SMAD3 readout, hypertrophy stimulus model |
Nature communications |
High |
38467649
|
| 2023 |
YTHDF2 promotes degradation of m6A-modified DAPK3 mRNA by binding its 3'-UTR, driving gallbladder cancer progression and gemcitabine resistance. |
RIP-seq, MeRIP-seq, RNA-seq integration, RNA stability assay, in vitro/in vivo functional assays |
Cancer science |
Medium |
37700438
|
| 2023 |
YTHDF2 binds m6A-modified Ythdf2/YTHDF2 mRNA as part of an autoregulatory loop in CD8+ T cells, reinforcing its own expression; this nuclear function requires m6A recognition by the YTH domain. |
m6A-seq, YTHDF2 nuclear localization demonstrated, domain mutagenesis, T cell-specific KO |
Nature communications |
Medium |
39500904
|
| 2023 |
Ythdf2 binds m6A sites in STK11 mRNA and recruits AGO2 to form a silencing complex promoting STK11 mRNA degradation; loss of Ythdf2 stabilizes STK11, activates AMPK/mTOR, and impairs myoblast differentiation. |
Co-IP of Ythdf2-Ago2, RIP, m6A-RIP, RNA stability assay, AMPK/mTOR pathway readouts |
International journal of biological macromolecules |
Medium |
37884231
|
| 2024 |
YTHDF2 mediates m6A-dependent degradation of SLC7A11 mRNA in Sertoli cells, as shown by RIP experiments demonstrating direct binding; this is exploited by BPF toxin to disrupt blood-testis barrier integrity. |
MeRIP, RIP, FTO overexpression/KD, in vivo/in vitro models |
Environmental pollution |
Low |
38996995
|
| 2023 |
YTHDF2 promotes degradation of CDKN1B mRNA in an m6A-dependent manner in intrahepatic cholangiocarcinoma, identified by integration of RNA-seq, MeRIP-seq, and anti-YTHDF2 RIP-seq. |
MeRIP-seq, RNA-seq, anti-YTHDF2 RIP-seq integration, RNA stability assay, PDX model |
Clinical and translational medicine |
Medium |
35696608
|
| 2023 |
YBX2 interacts with YTHDF2 through its cold-shock domain and recruits YTHDF2 to cytoplasmic granules; YTHDF2 knockdown ameliorates YBX2-induced HSPA6 mRNA destabilization in endometrial cancer cells. |
Co-IP, RNA pulldown, YTHDF2 KD rescue, mRNA stability assay |
Experimental cell research |
Low |
37030331
|
| 2024 |
YTHDF2 cardiomyocyte-specific knockout drives cardiac dysfunction; YTHDF2 normally binds m6A-modified Myzap mRNA and controls its stability, and loss of YTHDF2 leads to upregulation of MYZAP, causing adverse cardiac remodeling. |
Cardiomyocyte-specific Ythdf2 KO, proteomics, m6A-RIP on Myzap mRNA, in vivo cardiac function measurements |
JACC. Basic to translational science |
Medium |
37791304
|
| 2024 |
Lactylation of YTHDF2 (mediated by elevated lactate) increases its protein levels in cardiomyocytes; the intrinsically disordered region of YTHDF2 (not its m6A-binding activity) is required for its role in upregulating G3BP1 to control cardiomyocyte size and OGD/R-induced apoptosis. |
Lactylation detection, domain-deletion mutants lacking m6A binding, G3BP1 pathway readout, OGD/R cardiomyocyte model |
Basic research in cardiology |
Medium |
38563985
|
| 2024 |
IFN-γ induces autophagic degradation of tumoral YTHDF2, sensitizing tumor cells to CD8+ T cell-mediated cytotoxicity; tumoral YTHDF2 deficiency promotes macrophage recruitment via CX3CL1 and enhances mitochondrial respiration in CD8+ T cells by impairing tumor glycolysis. |
Tumoral Ythdf2 KO, co-culture assays, autophagy inhibitors, metabolic assays, in vivo immunocompetent tumor models |
Science immunology |
High |
38820140
|