| 1997 |
VRK1 was identified as a novel serine/threonine kinase with 40% amino acid identity to vaccinia virus B1R kinase over 305 residues, establishing it as a member of a new kinase family related to, but distinct from, casein kinase 1. |
cDNA cloning, sequence analysis, Northern blotting |
Genomics |
Medium |
9344656
|
| 2000 |
VRK1 phosphorylates p53 specifically at threonine-18 (within the mdm-2 binding site/hydrophobic loop), has strong autophosphorylating activity, and phosphorylates acidic substrates (phosvitin, casein) and basic substrates (histone H2B, myelin basic protein). The C-terminal domain (residues 268–396) contains a nuclear localization signal that targets VRK1 to the nucleus. |
In vitro kinase assay with GST-fusion substrates, autophosphorylation assay, GFP-fusion subcellular localization |
Oncogene |
High |
10951572
|
| 2004 |
VRK1 phosphorylates ATF2 at Thr-73 and Ser-62, stabilizing ATF2 protein and increasing its intracellular level. VRK1 colocalizes with ATF2 in the nucleus and forms a stable complex. A kinase-dead VRK1 (K179E) or T73A ATF2 substitution prevents ATF2 accumulation and transcriptional activation. VRK1 and JNK have additive effects on ATF2-dependent transcription at suboptimal doses. |
In vitro kinase assay, co-immunoprecipitation, mutagenesis, transcriptional reporter assay, immunofluorescence colocalization |
The Journal of biological chemistry |
High |
15105425
|
| 2004 |
VRK1 phosphorylates c-Jun at Ser63 and Ser73 in vitro (the same residues targeted by JNK), stabilizes and accumulates c-Jun protein, activates c-Jun-dependent transcription, and interacts with c-Jun but not with JNK. VRK1 and JNK have additive effects on c-Jun transcriptional activation at suboptimal doses. |
In vitro kinase assay, immunoprecipitation, transcriptional reporter assay, western blot for endogenous phospho-c-Jun |
Oncogene |
High |
15378002
|
| 2006 |
In C. elegans, VRK-1 (the VRK1 ortholog) phosphorylates BAF-1 and regulates BAF localization. VRK-1 localizes to the nuclear envelope and chromatin in a cell-cycle-dependent manner. Depletion of VRK-1 causes mitotic defects including impaired nuclear envelope formation and BAF delocalization. |
RNAi depletion, temperature-sensitive mutant analysis, live imaging, immunofluorescence in C. elegans embryos |
The EMBO journal |
High |
17170708
|
| 2006 |
VRK1 is an early-response gene: its expression is induced upon serum addition to starved cells (paralleling MYC, FOS, CCND1), and its loss via siRNA causes G1 block in cell division with loss of phosphorylated-Rb and cyclin D1. |
Serum stimulation of starved cells, siRNA knockdown, flow cytometry cell cycle analysis, western blot for proliferation markers |
Molecular cancer research : MCR |
Medium |
16547155
|
| 2007 |
Most intracellular VRK1 protein is nuclear, but a subpopulation localizes to the cytosol and Golgi apparatus depending on cell type. A T355 phosphomimetic substitution near the nuclear localization signal alters antibody reactivity, suggesting post-translational modification regulates VRK1 subcellular distribution. |
Immunofluorescence in cell lines, immunohistochemistry of human biopsies, phosphomimetic mutagenesis |
Archives of biochemistry and biophysics |
Low |
17617371
|
| 2008 |
VRK1 phosphorylates CREB at Ser133 in vitro and in cells. VRK1 facilitates recruitment of phospho-CREB to the CRE element in the CCND1 promoter to drive cyclin D1 expression. Kinase-dead VRK1 or VRK1 siRNA knockdown fails to activate CREB or CRE-driven transcription. VRK1 is a critical link in the CCND1 expression pathway downstream of Myc overexpression. |
In vitro kinase assay, ChIP, siRNA knockdown, luciferase reporter assay, western blot |
Journal of cell science |
High |
18713830
|
| 2008 |
VRK1 downregulation by p53 occurs through the autophagic/lysosomal pathway and requires DRAM (a p53-induced gene in the endosomal-lysosomal compartment). DNA damage (UV, IR, etoposide, doxorubicin) stabilizes p53, induces DRAM, and leads to VRK1 downregulation; this process requires nuclear export of VRK1 (blocked by leptomycin B) and Beclin1, and results in reduced p53 Thr18 phosphorylation. |
siRNA knockdown of DRAM, leptomycin B treatment, LC3/p62 western blot, Beclin1 RNAi, overexpression assays |
PloS one |
Medium |
21386980
|
| 2008 |
Plk3 interacts with VRK1, forming a stable complex. Plk3 phosphorylates the C-terminal region of VRK1 at Ser342 but VRK1 does not phosphorylate Plk3. Phosphorylation of VRK1 at Ser342 is required for Golgi fragmentation: VRK1 with S342 substitutions is catalytically active but blocks Golgi fragmentation. VRK1 and Plk3 represent consecutive steps in the MEK1-Plk3-VRK1 Golgi fragmentation cascade. |
Reciprocal immunoprecipitation, pull-down assay, in vitro kinase assay, siRNA knockdown, immunofluorescence (Golgi marker giantin), dominant-negative approaches |
Molecular and cellular biology |
High |
19103756
|
| 2008 |
Ran GTPase interacts with and inhibits VRK1 kinase activity. RanGDP (inactive form, especially RanT24N) strongly inhibits VRK1 autophosphorylation and VRK1-mediated histone H3 phosphorylation; active RanGTP or RanL43E relieves this inhibition. Ran does not interact with RCC1 directly through VRK1, but can form a ternary complex. VRK1 does not phosphorylate Ran or RCC1. |
Pulldown of endogenous proteins, reciprocal immunoprecipitation, mass spectrometry, in vitro kinase assay with Ran mutants |
Molecular & cellular proteomics : MCP |
High |
18617507
|
| 2008 |
VRK1 is an early-response gene required for cell cycle entry at G0/G1. siRNA-mediated VRK1 loss results in G1 block, loss of phosphorylated-Rb, cyclin D1, and PCNA, and reduced cell proliferation. VRK1 expression is induced by serum and correlates inversely with p27. |
siRNA knockdown, serum stimulation, flow cytometry, western blot for cell cycle markers, reporter assay |
PloS one |
Medium |
18286197
|
| 2009 |
VRK1 hypomorphic mice (GT3/GT3, ~15% wild-type VRK1) are viable but infertile. VRK1 is expressed in Sertoli cells and spermatogonia, and its loss results in a progressive defect in spermatogonial proliferation/differentiation, ultimately eliminating mitotic and meiotic cells from adult testis. |
Gene-trap mouse genetics, histology, in situ expression analysis |
Biology of reproduction |
Medium |
19696012
|
| 2010 |
In C. elegans, VRK-1 is required for normal germ cell proliferation, and acts in part by negatively regulating CEP-1 (p53) activity. Loss of cep-1 significantly rescues vrk-1 proliferation defects, placing VRK-1 upstream of CEP-1/p53 in germline proliferation control. |
Genome-wide RNAi screen, genetic epistasis (double mutant rescue), gene expression profiling |
Developmental biology |
Medium |
20599896
|
| 2011 |
NMR solution structure of catalytically active human VRK1 (residues 1–361) revealed that the C-terminal tail orients toward the catalytic site and forms interactions critical for structural stability and catalysis. Deletion of the C-terminal tail dramatically reduces autocatalytic activity. ATP binding involves the hinge region, catalytic loop, and DYG motif, with additional contacts from C-terminal tail residues. |
NMR solution structure determination, deletion mutant kinase assays, NMR titration with ATP/ATP analogs |
The Journal of biological chemistry |
High |
21543316
|
| 2011 |
MacroH2A1.2 directly interacts with VRK1 and suppresses VRK1-mediated histone H3 phosphorylation during interphase. MacroH2A1.2 levels are markedly reduced in mitosis, thereby relieving VRK1 inhibition. VRK1-macroH2A1.2 interaction was confirmed by NMR spectroscopy. |
Co-immunoprecipitation, NMR spectroscopy (binding characterization), cell cycle synchronization, western blot for H3 phosphorylation |
The Journal of biological chemistry |
High |
22194607
|
| 2011 |
The kinase VRK1 is required for normal meiotic progression in female mouse oogenesis. VRK1 reduction (gene-trap hypomorph) causes delayed meiotic progression, lagging chromosomes at the metaphase plate, and failure of oocyte fertilization. These defects are independent of p53 activity. |
Gene-trap mouse hypomorph, histology, meiotic chromosome spreads, p53 knockout epistasis |
Mechanisms of development |
Medium |
21277975
|
| 2012 |
VRK1 directly phosphorylates 53BP1 in serum-starved cells in response to ionizing radiation-induced double-strand breaks. VRK1 knockdown causes defective 53BP1 foci formation (reduced number and size) after IR; this effect is p53- and ATM-independent and is rescued by siRNA-resistant VRK1 mutants. VRK1 knockdown also prevents activating phosphorylation of ATM, CHK2, and DNA-PK in response to IR. |
In vitro kinase assay, siRNA knockdown, immunofluorescence for 53BP1 foci, western blot for ATM/CHK2/DNA-PK phosphorylation, siRNA-resistant rescue constructs |
The Journal of biological chemistry |
High |
22621922
|
| 2012 |
VRK1 phosphorylates hnRNP A1, and this phosphorylation potentiates hnRNP A1 binding to telomeric ssDNA and telomerase RNA in vitro, and enhances telomerase activity. VRK1 deficiency in mouse male germ cells causes telomere shortening with abnormal telomere arrangement and activation of DNA-damage signaling. |
In vitro kinase assay, EMSA (ssDNA binding), telomerase activity assay, mouse VRK1 hypomorph analysis |
Nucleic acids research |
Medium |
22740652
|
| 2014 |
VRK1 depletion in MCF10a and MDA-MB-231 cells causes aberrant nuclear envelope architecture. GFP-BAF FRAP analysis shows elevated immobile fraction at the nuclear envelope in VRK1-depleted cells, indicating prolonged BAF-partner interactions. In VRK1-depleted cells, BAF does not disperse at mitosis onset but remains chromosome-bound throughout mitosis. VRK1 depletion also increases anaphase bridges and multipolar spindles. |
siRNA knockdown, FRAP of GFP-BAF, live-cell imaging, immunofluorescence for mitotic phenotypes |
Molecular biology of the cell |
High |
24430874
|
| 2014 |
VRK1 forms a basal stable complex with p53 through the p53 DNA-binding domain. UV-induced DNA damage activates VRK1 and triggers phosphorylation of p53 at Thr-18 before p53 accumulates. Frequent DNA-contact p53 mutants (R273H, R248H, R280K) do not disrupt the VRK1-p53 complex. |
Co-immunoprecipitation, in vitro kinase assay, UV treatment, western blot for phospho-p53 Thr18 |
FEBS letters |
Medium |
24492002
|
| 2015 |
VRK1 is a nucleosomal chromatin kinase that directly and stably interacts with histones H2AX and H3. VRK1 depletion causes loss of H3 and H4 acetylation (required for chromatin relaxation) in basal conditions and after DNA damage, independently of ATM. In response to ionizing radiation, VRK1 phosphorylates histone H2AX at Ser139 (γH2AX); VRK1 depletion prevents γH2AX foci formation, which is rescued by kinase-active but not kinase-dead VRK1. |
Chromatin fractionation, Co-immunoprecipitation with histones, siRNA knockdown, ionizing radiation, immunofluorescence for γH2AX foci, kinase-dead rescue |
Epigenetics |
High |
25923214
|
| 2015 |
VRK1 directly interacts with and phosphorylates coilin at Ser184. Phosphorylation of coilin by VRK1 occurs during mitosis and regulates coilin stability: VRK1 knockdown or inactivation causes loss of coilin phosphorylation and Cajal body (CB) disassembly, leading to coilin ubiquitination (partly mediated by mdm2) and proteasomal degradation in the cytosol (after nuclear export). Kinase-active but not kinase-dead VRK1 rescues CB formation. |
Co-immunoprecipitation, in vitro kinase assay, siRNA knockdown, immunofluorescence, proteasome inhibitor (MG132), nuclear export inhibitor |
Scientific reports |
High |
26068304
|
| 2015 |
VRK1 regulates neuronal migration and neuronal stem cell proliferation. In utero electroporation shRNA knockdown of Vrk1 in mice impairs cortical neuronal migration and affects cell cycle of neuronal progenitors; wild-type human VRK1 rescues both phenotypes. Kinase-dead VRK1 rescues migration but not proliferation, indicating the migration role is partly non-catalytic. VRK1 deficiency reduces amyloid-β precursor protein (APP) levels, and APP overexpression rescues the Vrk1 knockdown neuronal migration phenotype. |
In utero electroporation shRNA, cortical migration assay, kinase-dead rescue, western blot for APP, APP overexpression rescue |
The Journal of neuroscience |
Medium |
25609612
|
| 2016 |
VRK1 phosphorylates NBS1 at Ser343, forming a basal preassembled complex with NBS1 in non-damaged cells. VRK1 knockdown causes loss of NBS1 foci after ionizing radiation (also in cell-cycle arrested and ATM−/− cells). NBS1 phosphorylation by VRK1 (induced by doxorubicin or IR) contributes to NBS1 stability: loss of this phosphorylation can be prevented by MG132 proteasome inhibitor or RNF8 knockdown. |
Co-immunoprecipitation, in vitro kinase assay (ATM−/− cells), siRNA knockdown, immunofluorescence for NBS1 foci, proteasome inhibitor treatment |
Biochimica et biophysica acta |
High |
26869104
|
| 2017 |
VRK1 phosphorylates pregnane X receptor (PXR) at Ser350 in response to low glucose conditions, enabling PXR to scaffold PP2Cα, which dephosphorylates SGK2 at Thr193, releasing SGK2 repression of the PCK1 gluconeogenesis gene. CDK2 inhibits VRK1 activity toward PXR under high glucose conditions, forming a VRK1-CDK2-PXR-PP2Cα-SGK2 pathway regulating gluconeogenesis. |
In vitro kinase assay, co-immunoprecipitation, cell-based phosphorylation assays, CDK2 inhibition, fasting mouse liver analysis |
Cellular signalling |
Medium |
28911860
|
| 2018 |
VRK1 and Aurora B (AURKB) form a stable protein complex (minor subpopulation, detected after nocodazole release). Each kinase inhibits the kinase activity of the other, and each inhibits the other's phosphorylation of histone H3 (VRK1 on Thr3, AURKB on Ser10). VRK1 depletion downregulates BIRC5 (survivin) expression and is rescued by kinase-active but not kinase-dead VRK1; loss of the H3-Thr3ph–survivin complex prevents AURKB localization to centromeres. |
Co-immunoprecipitation, in vitro kinase assay (cross-inhibition), siRNA knockdown, immunofluorescence, kinase-active vs. kinase-dead rescue |
Cellular and molecular life sciences : CMLS |
High |
29340707
|
| 2020 |
In C. elegans, VRK-1 directly phosphorylates and activates AMPK, promoting longevity. VRK-1 overexpression increases lifespan and inhibition decreases lifespan; vrk-1 is required for longevity conferred by inhibited mitochondrial respiration (which requires AMPK). VRK-1 directly phosphorylates and upregulates AMPK in both C. elegans and human cultured cells. |
In vitro kinase assay (direct phosphorylation of AMPK), C. elegans lifespan assays, genetic epistasis with AMPK mutants, overexpression in cultured human cells |
Science advances |
High |
32937443
|
| 2020 |
VRK1 directly phosphorylates Tip60/KAT5 in the chromatin fraction in response to DNA damage (doxorubicin). VRK1 depletion causes loss of Tip60 phosphorylation in both ATM+/+ and ATM−/− cells; kinase-active but not kinase-dead VRK1 rescues Tip60 phosphorylation. VRK1-mediated Tip60 phosphorylation is necessary for Tip60 acetyltransferase activity toward ATM (activating acetylation) and subsequent ATM autophosphorylation; both are lost by VRK1 depletion. |
In vitro kinase assay, Co-immunoprecipitation, siRNA knockdown (ATM+/+ and ATM−/− cells), Tip60 inhibitor (MG149), kinase-active/dead rescue |
Cancers |
High |
33076429
|
| 2021 |
Vaccinia virus B12 pseudokinase directly interacts with VRK1 (as the most enriched B12 interactor by proteomics), and B12 interferes with VRK1's ability to phospho-inactivate BAF. VRK1 is required for rescue of B1-deleted virus; VRK1 overexpression overcomes B12-mediated repression of viral replication. B12 promotes VRK1 colocalization with cellular DNA during mitosis. |
Protein interactome (mass spectrometry), VRK1 knockdown and overexpression assays, viral replication assays, immunofluorescence |
Journal of virology |
Medium |
33177193
|
| 2022 |
VRK1 interacts with both linker DNA and the nucleosome acidic patch to phosphorylate histone H3T3. Acidic patch binding is mediated by a C-terminal arginine-rich flexible tail. Disease-associated missense and nonsense mutations in this C-terminal acidic patch recognition motif disrupt nucleosome acidic patch binding and cause VRK1 mislocalization during mitosis. |
Cryo-electron microscopy, biochemical binding assays (chromatin/nucleosome), cellular localization assays (mitosis), analysis of disease-associated mutants |
Nucleic acids research |
High |
35390161
|
| 2022 |
VRK1 and VRK2 are synthetic-lethal paralogs. In VRK2-null/methylated glioblastoma cells, VRK1 knockdown reduces phosphorylation of BAF, causing nuclear lobulation, blebbing, and micronucleation, followed by G2-M arrest and DNA damage. The synthetic-lethal interaction requires VRK1 kinase activity and is rescued by ectopic VRK2 expression. |
CRISPR/Cas9 knockdown, VRK2 ectopic expression rescue, phospho-BAF western blot, live-cell imaging (nuclear morphology), flow cytometry (G2-M arrest), xenograft models |
Cancer research |
High |
36069976
|
| 2022 |
The VRK1 chromatin kinase regulates Tip60/KAT5 through sequential phosphorylation events: VRK1 phosphorylates Tip60 at T158 (early, transient), which protects Tip60 from ubiquitin-mediated degradation, promotes its recruitment from nucleoplasm to chromatin, and is necessary for full trans-acetylase activity. DNA-PK subsequently phosphorylates Tip60 at S199, enabling Tip60 autoacetylation; however, full trans-acetylation of H4 and ATM requires both T158 and S199 phosphorylation. |
In vitro kinase assay, phosphomimetic and phosphonull mutants, Co-immunoprecipitation, chromatin fractionation, DNA-PK inhibitor treatment |
Biochimica et biophysica acta. Gene regulatory mechanisms |
High |
36280132
|
| 2022 |
Using in vitro kinase assays, KiPIK screening, RNAi, and CRISPR/Cas9 approaches, VRK1 and its paralog VRK2 could NOT be substantiated as the kinases responsible for histone H3 Thr3 or Ser10 phosphorylation during mitosis; Haspin is the kinase responsible for H3T3ph in mitosis. Loss of VRK1 did slow cell proliferation. |
In vitro kinase assays, KiPIK screening, RNA interference, CRISPR/Cas9 knockout |
Scientific reports |
Medium |
35778595
|
| 2022 |
In zebrafish, Ankle2 deficiency causes microcephaly and spermatogenesis defects through dysregulated BAF phosphorylation. Heterozygous deletion of vrk1 or vrk1 morpholino knockdown rescues the Ankle2-deficient microcephaly and partially rescues spermatogenesis defects, placing VRK1 downstream of ANKLE2 in the BAF phosphorylation pathway regulating neurogenesis. |
Zebrafish genetic knockout and morpholino knockdown, genetic epistasis, brain size measurement, cell proliferation assays |
Biochemical and biophysical research communications |
Medium |
35940133
|
| 2023 |
VRK1 kinase activity is inhibited by direct interaction with SIRT2 deacetylase through VRK1's N-terminal kinase domain. VRK1-SIRT2 interaction causes loss of H4K16 acetylation (similar to VRK1 inhibitor VRK-IN-1 or VRK1 depletion). SIRT2 inhibitors increase H4K16ac, cooperating with VRK1 in chromatin accessibility in response to DNA damage. |
In vitro interaction/pull-down assay, in vitro kinase assay, Co-immunoprecipitation, immunofluorescence, H4K16ac western blot |
International journal of molecular sciences |
Medium |
36902348
|
| 2024 |
VRK1 promotes DNA-induced type I interferon production through the cGAS-STING pathway. VRK1 knockdown attenuates induction of type I IFNs and ISGs following HTDNA and Poly(dA:dT) stimulation; VRK-IN-1 (VRK1 inhibitor) similarly suppresses IFN-I induction. VRK1 potentiates the cGAS-STING-IFN-I axis at the level of STING. |
siRNA knockdown, pharmacological inhibition (VRK-IN-1), real-time PCR, dual-luciferase reporter assay in human and murine cell lines and primary BMDMs |
Molecular biology reports |
Medium |
38536553
|
| 2025 |
VRK1 directly interacts with and phosphorylates CHD1L at serine 122. VRK1-CHD1L-SNAI1 forms an axis by which VRK1 promotes EMT in hepatocellular carcinoma: VRK1 phosphorylation of CHD1L upregulates SNAI1 expression (identified by RNA-seq as a key downstream target). |
Immunoprecipitation combined with mass spectrometry, in vitro kinase assay (phosphosite identification), RNA-seq, VRK1 overexpression/knockdown functional assays |
Cell death & disease |
Medium |
40234378
|