| 2012 |
Fis1 acts as a mitochondrial recruitment factor for TBC1D15: Fis1 and TBC1D15 form a direct and stable complex (demonstrated with bacterially expressed proteins), and coexpression with Fis1 relocalized TBC1D15 from cytoplasm to mitochondria. Knockdown of TBC1D15 induced highly developed mitochondrial network structures (hyperfusion) similar to Fis1 knockdown, independently of Drp1. |
Co-immunoprecipitation, in vitro binding with bacterially expressed proteins, subcellular localization by fluorescence microscopy, siRNA knockdown with mitochondrial morphology readout |
Journal of cell science |
High |
23077178
|
| 2010 |
TBC1D15 functions as a selective Rab7 GTPase-activating protein (GAP) in cells, reducing Rab7-GTP levels (measured by effector pulldown with RILP), fragmenting lysosomes, and conferring resistance to growth factor withdrawal-induced cell death. TBC1D15 GAP activity was selective for Rab7 and did not affect Rab4-, Rab5-, or Rab11-dependent processes. |
Effector pulldown assay (RILP binding to Rab7-GTP), lysosomal morphology imaging, cell survival assay, transferrin internalization/recycling assay |
The Journal of biological chemistry |
High |
20363736
|
| 2017 |
Crystal structures of TBC1D15 GAP domain (shark and pig orthologs) resolved to 2.8 Å and 2.5 Å revealed structural conservation within the TBC1D15 family and showed variations compared to yeast Gyp1p and TBC1D1. Active-site mutagenesis demonstrated that the catalytic arginine and glutamine residues are essential for GAP activity; substitution to alanine or lysine abolished activity. |
X-ray crystallography, in vitro GAP activity assay, active-site mutagenesis |
Protein science |
High |
28168758
|
| 2013 |
TBC1D15 was identified as a Numb-associated protein by large-scale affinity purification and tandem mass spectrometry. The amino-terminal domain of TBC1D15 disengages p53 from the Numb-p53 complex, triggering p53 proteolysis and promoting stem cell self-renewal and pluripotency. TBC1D15 protein levels are reduced by autophagy-mediated degradation upon nutrient deprivation. |
Affinity purification and tandem mass spectrometry, co-immunoprecipitation, domain mapping, cell self-renewal and pluripotency assays, autophagy inhibitor experiments |
PloS one |
Medium |
23468968
|
| 2013 |
Depletion of TBC1D15 by siRNA induced RhoA activation and membrane blebbing, which was abolished by a RhoA signaling inhibitor. TBC1D15 is also required for proper accumulation of RhoA at the equatorial cortex during cytokinesis, establishing a role for TBC1D15 in regulating RhoA activity during membrane dynamics and cell division. |
siRNA knockdown, RhoA activation assay, membrane bleb quantification, RhoA inhibitor treatment, fluorescence microscopy of cytokinesis |
Molecular and cellular biochemistry |
Medium |
24337944
|
| 2013 |
The Drosophila TBC1D15 ortholog Tbc1d15-17 is required for normal presynaptic growth and postsynaptic organization at the NMJ. Loss-of-function or presynaptic knockdown increased synaptic bouton number and NMJ length. Genetic epistasis showed that presynaptic overexpression of constitutively active Rab7 phenocopied tbc1d15-17 mutants (overgrowth), while dominant-negative Rab7 had the opposite effect, placing Tbc1d15-17 upstream of Rab7 in synaptic development. |
Drosophila genetics (loss-of-function mutant, tissue-specific RNAi), epistasis with constitutively active and dominant-negative Rab7, NMJ morphology analysis |
Molecules and cells |
Medium |
23812537
|
| 2019 |
Annexin A6 (AnxA6) promotes Rab7 inactivation via TBC1D15 (Rab7-GAP). AnxA6 overexpression induces late endosomal cholesterol accumulation dependent on TBC1D15-mediated Rab7 inactivation. AnxA6 depletion in NPC1 mutant cells leads to Rab7 activation, peripheral redistribution of late endosomes, and StARD3-dependent cholesterol transfer to the ER via membrane contact sites. |
Co-immunoprecipitation, fluorescence microscopy of late endosome localization, cholesterol accumulation assays, electron microscopy of membrane contact sites, genetic depletion experiments |
Cellular and molecular life sciences |
Medium |
31664461
|
| 2020 |
TBC1D15 loosens abnormal mitochondria-lysosome contacts after myocardial infarction through both its Fis1-binding domain and its Rab7 GAP domain. Interference with either domain reversed TBC1D15-dependent beneficial effects on lysosomal function and mitophagy flux, establishing that both interaction surfaces are required for TBC1D15's role in mitochondria-lysosome contact regulation. |
Domain-specific mutant overexpression (Fis1-binding and GAP-domain mutants), transmission electron microscopy of mitochondria-lysosome contacts, live-cell time-lapse imaging, mitophagy flux assay (fluorescence and western blot), adenoviral cardiac overexpression in mice |
Theranostics |
Medium |
33042281
|
| 2022 |
TBC1D15 directly interacts with Drp1 through its C-terminal domain (residues 574-624), recruiting Drp1 to mitochondria-lysosome contact sites to promote asymmetrical mitochondrial fission. TBC1D15 mutants lacking this domain (Δ574-624) failed to support asymmetrical fission and mitochondrial function, and could not rescue cardiac phenotypes in TBC1D15 knockout mice after I/R injury. |
Co-immunoprecipitation, time-lapse confocal microscopy, domain-deletion mutant analysis, cardiac-specific knockout/knockin mouse models, adenoviral rescue with wild-type vs. mutant TBC1D15 |
Metabolism: clinical and experimental |
Medium |
35680100
|
| 2023 |
Following lysosomal membrane damage, LIMP2 acts as a lysophagy receptor to recruit ATG8, which in turn recruits TBC1D15 to damaged lysosomes. TBC1D15 interacts with ATG8 proteins and provides a scaffold to assemble the autophagic lysosomal reformation (ALR) machinery including dynamin-2, kinesin-5B, and clathrin, enabling lysosomal tubulation and scission for membrane regeneration. |
Proximity-labeling proteomics, co-immunoprecipitation, high-resolution microscopy, genetic depletion of TBC1D15 and ALR components, lysosomal damage model (oxalate nephropathy cell culture) |
Nature cell biology |
High |
37024685
|
| 2017 |
TBC1D15 knockdown rescued nigericin-induced suppression of the STING innate immune pathway, while knockdown of Drp1 (also rescuing mitochondrial fission) did not restore STING activity. This establishes a specific, Drp1-independent role for TBC1D15 in maintaining STING pathway competency during mitochondrial fragmentation induced by inflammasome-activating signals. |
siRNA knockdown, STING pathway reporter assays (IFN-β, ISG56), mitochondrial morphology imaging, genetic epistasis between TBC1D15, Drp1, and NLRP3 |
FASEB journal |
Medium |
28729291
|
| 2023 |
TBC1D15 interacts with DNA-PKcs at its segment 594-624. TBC1D15 promotes cytosolic retention of DNA-PKcs, contributing to DNA damage signaling; a TBC1D15 deletion mutant lacking residues 594-624 failed to elicit cytosolic DNA-PKcs accumulation or exacerbate DOX-induced DNA damage and cardiomyocyte apoptosis. |
Liquid chromatography-tandem mass spectrometry, co-immunoprecipitation, domain-deletion mutant analysis, cardiac-specific knockout/knockin mouse models, DNA damage assays |
Acta pharmaceutica Sinica. B |
Medium |
38045047
|
| 2018 |
TBC1D15 knockout (CRISPR/Cas9) caused reduced glucose uptake, decreased total GLUT4 levels, and increased co-localization of GLUT4 with Rab7-positive late endosomes/lysosomes, demonstrating that TBC1D15-mediated Rab7-GAP activity controls GLUT4 routing through the late endosomal pathway to regulate glucose transporter surface availability. |
CRISPR/Cas9 knockout, 2-NBDG glucose uptake assay, GLUT4 western blot, immunofluorescence co-localization with Rab7/Lamp1 |
Gene |
Medium |
30316925
|
| 2020 |
IFN-β induces expression of Mir1 microRNA, which reduces TBC1D15 levels, thereby decreasing Rab7 activity and stimulating macroautophagy. This MIR1-TBC1D15-RAB7 pathway is conserved from humans to C. elegans and represents a mechanism by which IFN-β regulates autophagic flux. |
miRNA overexpression, TBC1D15 knockdown, Rab7 activity measurement, autophagy flux assays, C. elegans genetic validation |
Autophagy |
Medium |
31958036
|
| 2023 |
A conserved SKY insert (S45, K46, Y47) in FIS1's first TPR repeat is required for proper TBC1D15 recruitment to mitochondria. Deletion of SKY impaired mitochondrial recruitment of both TBC1D15 and DRP1, while the SKY-to-AAA substitution enhanced TBC1D15-driven DRP1 recruitment, indicating intramolecular regulation of FIS1 activity governs TBC1D15 and DRP1 docking. |
Site-directed mutagenesis, co-immunoprecipitation, fluorescence microscopy of YFP-TBC1D15 localization, mitochondrial morphology analysis in HCT116 cells |
The Journal of biological chemistry |
Medium |
37777154
|
| 2024 |
TBC1D15 stabilizes NOTCH1 by blocking CDK8- and CDK19-mediated phosphorylation of the NOTCH1 PEST phosphodegron, thereby preventing FBW7 E3 ligase recruitment to Thr-2512 of NOTCH1. TBC1D15 interacts with full-length NUMB and NUMB isoform 5 and relocalizes NUMB5 to mitochondria. The NOTCH1-TBC1D15-FIS1 interaction recruits mitochondria to the perinuclear region. |
Chromatin immunoprecipitation sequencing (ChIP-seq), co-immunoprecipitation, phosphorylation assays, hepatocyte-specific triple knockout mouse model, PDX mouse model |
Experimental & molecular medicine |
Medium |
38409448
|
| 2025 |
TBC1D15 translocates to mitochondrial membranes in hepatocytes upon alcohol exposure and recruits PLIN5 through its N-terminal 10-180 aa domain. This interaction promotes mitochondria-lipid droplet contacts and facilitates PKA-induced nuclear translocation of PLIN5, upregulating PPARα, PGC1α and CPT1α to enhance fatty acid β-oxidation. |
Co-immunoprecipitation, domain mapping, immunofluorescence of mitochondria-LD contacts, transmission electron microscopy, PKA inhibitor experiments, hepatocyte-specific TBC1D15 overexpression mouse model |
Metabolism: clinical and experimental |
Medium |
40334909
|
| 2026 |
TBC1D15 functions as a GAP for Arl4D (an Arf-family GTPase) in addition to Rab7: TBC1D15 interacts with Arl4D through its TBC domain and promotes GTP hydrolysis of Arl4D. TBC1D15 knockdown increases Arl4D activity and decreases Arl4D mitochondrial translocation under serum starvation, establishing TBC1D15 as a regulator of Arl4D-dependent mitochondrial homeostasis. |
Co-immunoprecipitation, in vitro GAP activity assay, subcellular fractionation/localization by fluorescence microscopy, TBC1D15 knockdown with Arl4D activity readout |
Journal of cell science |
Medium |
41709823
|
| 2024 |
In vivo knockdown of murine Tbc1d15 activates autophagy, reduces α-synuclein-mediated neurotoxicity, and improves motor performance in a Parkinson's disease mouse model, corroborating that TBC1D15 inhibits autophagic flux through Rab7 regulation and that its reduction is neuroprotective. |
In vivo Tbc1d15 knockdown (lentiviral/AAV), autophagy flux assays, α-synuclein aggregation quantification, motor performance behavioral assays |
bioRxivpreprint |
Low |
|