| 2008 |
Human PUM1 binds a core consensus sequence UGUAHAUA in the 3' UTR of target mRNAs and enhances their decay; PUM1 also relocalizes to stress granules, suggesting a role in translational repression. Genome-wide ribonomic analysis identified mRNAs enriched for transcriptional regulators and cell cycle/proliferation factors as PUM1 targets, and PUM1 knockdown demonstrated increased stability of associated mRNAs. |
RNA immunoprecipitation (RIP) followed by microarray (ribonomic analysis); PUM1 knockdown with mRNA stability assays; immunofluorescence for stress granule localization |
Molecular and cellular biology |
High |
18411299
|
| 2018 |
PUM1 haploinsufficiency causes upregulation of known PUM1 target mRNAs/proteins in patient-derived cells; missense mutations reduce PUM1 protein levels (~25% reduction for adult-onset, ~50% reduction for infantile-onset disease), and the degree of reduction correlates with phenotypic severity. This establishes PUM1 as a dose-sensitive posttranscriptional repressor of its target mRNAs in neurons. |
Patient-derived cell studies; protein level quantification (Western blot); measurement of target mRNA/protein levels |
Cell |
High |
29474920
|
| 2019 |
PUM1 (and PUM2) repress translation of CDKN1B (p27) by binding Pumilio binding elements (PBEs) in the 3' UTR, promoting G1-S transition and cell proliferation. Cdkn1b deficiency partially rescues the postnatal growth defects of Pum1-/- mice, establishing a genetic epistasis relationship. |
Pum1/Pum2 knockout mouse models; 3' UTR reporter assays; genetic rescue experiments (Pum1-/- × Cdkn1b-/- double mutants); Western blot for CDKN1B protein |
Cell reports |
High |
30811992
|
| 2019 |
PUM1 knockdown in pancreatic cancer cells activates the PERK/eIF2/ATF4 signaling pathway, as shown by increased levels of p-PERK, p-EIF2A, and ATF4. PUM1 levels negatively correlate with p-PERK in PDAC tissues, and a PERK inhibitor rescues the anti-proliferative effects of PUM1 knockdown, placing PUM1 upstream of the PERK/eIF2 pathway. |
siRNA knockdown; cDNA microarray and pathway analysis; Western blot; PERK inhibitor rescue experiments; in vitro and in vivo (xenograft) assays |
Cell death & disease |
Medium |
31395860
|
| 2017 |
PUM1 acts as a negative regulator of innate immunity by repressing LGP2 expression. PUM1 depletion triggers a two-phase cascade: initial upregulation of LGP2, CXCL10, IL6, and PKR (phase 1), followed by upregulation of RIG-I, MDA5, IFIT1, IFNβ, and others (phase 2). Simultaneous depletion of PUM1 and LGP2 abrogates both phases, establishing LGP2 as the direct downstream mediator. PUM2 depletion does not reproduce these effects. |
siRNA knockdown of PUM1 alone and combinatorial knockdown of PUM1 + LGP2/CXCL10/IL6; RT-PCR for target gene expression; IFNβ functional assays; HSV-1 replication assay |
Proceedings of the National Academy of Sciences of the United States of America |
High |
28760986
|
| 2022 |
PUM1 binds the 3' UTR of TLR4 mRNA to suppress its translation, thereby regulating NF-κB activity in human mesenchymal stem cells. PUM1 overexpression suppresses TLR4-mediated NF-κB signaling and protects against H2O2-induced senescence, while PUM1 knockdown activates TLR4-NF-κB signaling. The regulatory axis was confirmed in osteoarthritis models. |
RNA immunoprecipitation; 3' UTR binding assays; siRNA knockdown and overexpression; Western blot for TLR4 and NF-κB pathway; in vivo OA mouse model with lentiviral PUM1 gene therapy |
Cell death and differentiation |
High |
35034101
|
| 2020 |
PUM1 mediates decay of 48 specific target mRNAs identified by combined transcriptome-wide mRNA stability profiling and PUM1 binding data. DNA-damaging agents (e.g., cisplatin) reduce PUM1 abundance, leading to stabilization of PCNA and UBE2A mRNAs (involved in translesion synthesis). PUM1 overexpression impairs DNA synthesis and TLS and increases cisplatin sensitivity. |
Transcriptome-wide mRNA stability profiling (metabolic labeling); RIP-seq; RNA-seq; PUM1 overexpression and knockdown; cisplatin sensitivity assays; DNA synthesis assays |
Cell reports |
High |
32375027
|
| 2022 |
PUM1 directly binds γ-globin (HBG1) mRNA, reduces its stability and translational efficiency, thereby repressing fetal hemoglobin (HbF) production during erythroid differentiation. PUM1 expression is regulated by the erythroid transcription factor KLF1/EKLF and peaks during erythroid differentiation. PUM1 knockdown robustly increases HbF (~22%) without affecting β-globin levels. |
RNA immunoprecipitation (RIP); mRNA stability assays; translational efficiency assays; PUM1 knockdown in human erythroid cells; KLF1 regulation of PUM1 demonstrated; patient with heterozygous PUM1 RNA-binding domain mutation showing elevated HbF |
Blood advances |
High |
35667093
|
| 2019 |
PUM1 directly binds the 3' UTR of LRP6 mRNA via RNA pull-down, RIP, and luciferase reporter assays, reducing LRP6 mRNA and protein expression. PUM1 repression of LRP6 restricts trophoblast proliferation and invasion; PUM1 depletion promotes these processes in an LRP6-dependent manner. |
RNA pull-down; RNA immunoprecipitation (RIP); luciferase reporter assay; RT-qPCR and Western blot; siRNA knockdown |
Biochemistry and cell biology |
Medium |
34734756
|
| 2019 |
PUM1 inhibits trophoblast invasion in preeclampsia by binding HOTAIR lncRNA and decreasing its half-life (destabilizing HOTAIR mRNA). RNA-protein pull-down and mRNA stability assays identified PUM1 as a specific binding partner that reduces the steady-state level of HOTAIR, establishing a posttranscriptional regulatory mechanism. |
RNA immunoprecipitation (RIP); RNA-protein pull-down; mRNA stability assays; lncRNA transcriptome sequencing; overexpression and knockdown of PUM1; villous explant culture model |
Molecular therapy |
Medium |
31862314
|
| 2021 |
PUM1 represses CDKN1B (p27) at the translational level in prostate cancer cells. PUM1 knockdown elevates CDKN1B protein without changing its mRNA level; PUM1 overexpression reduces CDKN1B protein. PUM1 knockdown in vivo reduces tumor size. |
siRNA knockdown and overexpression of PUM1; Western blot and RT-qPCR for CDKN1B; subcutaneous xenograft mouse model |
Journal of biomedical research |
Medium |
34531333
|
| 2018 |
PUM1 exhibits PBE-independent repression of SIAH1 3' UTR (unlike PUM2 which requires PBEs), and the PUF domains of PUM1 and PUM2 show different EMSA complex formation patterns with SIAH1 3' UTRs. NANOS3 (but not NANOS2) directly binds SIAH1 3' UTR and cooperates with PUM1 in repression. |
Luciferase reporter assays with WT and PBE-mutant SIAH1 3' UTRs; EMSA (electrophoretic mobility shift assay); co-repression assays with NANOS paralogues |
Cellular and molecular life sciences |
Medium |
30269240
|
| 2020 |
PUM1 and PUM2 form distinct RNP regulatory networks in human male germ cells (TCam-2), associating with different sets of protein cofactors (identified by mass spectrometry) and regulating partially overlapping but distinct mRNA pools (identified by RIP-Seq). This indicates functional divergence between the two paralogs despite highly similar RNA-binding domains. |
RIP-Seq; RNA-Seq; global mass spectrometry-based protein cofactor profiling; RNA motif enrichment analysis |
Cells |
Medium |
32316190
|
| 2022 |
NANOS3 in complex with PUM1 causes 3' UTR-mediated repression of FOXM1 mRNA, which encodes a transcription factor required for G2/M phase transition. This establishes PUM1 as part of a NANOS3-PUM1 post-transcriptional repressor complex targeting FOXM1 to regulate G2/M progression in human primordial germ cells. |
RNA-sequencing; 3' UTR reporter assays; overexpression of NANOS3 and PUM1 in TCam-2 cells; cell cycle analysis |
International journal of molecular sciences |
Medium |
35743036
|
| 2023 |
PUM1 binds directly to the Pumilio response element (PRE) in DEPTOR mRNA to maintain transcript stability (preventing its degradation), which leads to DEPTOR upregulation, mTORC1 inhibition, and relief of inhibitory feedback to PI3K, thus activating PI3K-Akt signaling and glycolysis in gastric cancer cells. |
RNA immunoprecipitation; RNA-sequencing; metabolomics; PUM1 knockdown in vitro and in vivo; Western blot for mTORC1/PI3K-Akt pathway components |
Advanced science |
Medium |
37469018
|
| 2021 |
PUM1 interacts with DDX5 in the 3' UTR and positively regulates DDX5 mRNA expression in cetuximab-resistant colon cancer cells. PUM1 knockout reduced DDX5 levels and decreased cell viability in the presence of cetuximab. |
CRISPR-Cas9 knockout of PUM1 and DDX5; qPCR and immunoblot; co-immunoprecipitation; Cell Counting Kit-8 proliferation assay |
Frontiers in cell and developmental biology |
Low |
34447749
|
| 2024 |
A chromosomal translocation creates a PUM1-TRAF3 fusion protein that activates non-canonical NF-κB signaling via competitive binding to NF-κB-inducing kinase (NIK), preventing TRAF3-mediated NIK degradation and enabling P52/RelB nuclear translocation. An NIK inhibitor reverses these effects. |
RNA-sequencing for fusion gene identification; FISH for validation; establishment of PUM1-TRAF3-expressing BTC cell lines; molecular pathway analysis; NIK inhibitor rescue experiments |
NPJ precision oncology |
Medium |
39090283
|
| 2025 |
HIF1α transcriptionally activates PUM1 by directly binding its promoter under hypoxia. PUM1 then binds and destabilizes KCNK3 mRNA, reducing KCNK3 protein in pulmonary artery smooth muscle cells. In vivo AAV9-mediated PUM1 knockdown attenuated pulmonary hypertension, while PUM1 overexpression exacerbated it. HIF1α knockdown increased KCNK3 mRNA stability and reduced PUM1-KCNK3 mRNA interaction. |
ChIP for HIF1α binding to PUM1 promoter; RIP for PUM1-KCNK3 mRNA interaction; mRNA stability assays; AAV9-mediated in vivo knockdown; overexpression experiments; rat PH models |
Biochimica et biophysica acta. Molecular basis of disease |
Medium |
41135634
|
| 2025 |
PUM1-mediated mRNA decay requires the CCR4-NOT deadenylase complex (not the PAN deadenylase) and depends on the poly(A) tail. PUM1 associates with and requires PABPC1 and PABPC4 to repress target mRNAs. Increasing PABPC concentration inhibits PUM1 activity in a concentration-dependent manner by protecting poly(A) from deadenylation, establishing a tunable regulatory mechanism. |
Biochemical reconstitution; deadenylase requirement assays; PABPC co-immunoprecipitation; PABPC titration experiments; mRNA decay assays |
bioRxiv (preprint)preprint |
Medium |
bio_10.1101_2025.10.02.680050
|
| 2024 |
PUM1 binds CCR4-NOT through intrinsically disordered regions (IDRs) via multivalent interactions at several distinct binding sites. Phosphorylation within IDRs modulates PUM1 binding to CCR4-NOT and consequently tunes the mRNA deadenylation rate in a continuously graded (not binary) manner, as demonstrated by biochemical reconstitution and structural analysis. |
Structural biology; biochemical reconstitution; phosphorylation-dependent binding assays; in vitro deadenylation assays with WT and phosphomimetic/phosphoablative PUM1 IDR variants |
bioRxiv (preprint)preprint |
Medium |
bio_10.1101_2024.10.18.618793
|
| 2025 |
PUM1 enhances PAK6 mRNA stability by binding to PAK6 mRNA (demonstrated by RIP and luciferase assay), thereby promoting ferroptosis resistance in lung adenocarcinoma cells. PUM1 silencing promotes ferroptosis both in vitro and in vivo, and this effect is reversed by artificial restoration of PAK6. |
RNA immunoprecipitation; luciferase assay; PUM1/PAK6 knockdown; ferroptosis assays (Fe2+, MDA levels); in vivo xenograft model |
Pathology, research and practice |
Medium |
40694989
|
| 2014 |
PUM1 silencing in pancreatic cancer cells increases p27 (CDKN1B) expression and the amount of the p27-CDK2 complex, as shown by immunoprecipitation. PUM1 overexpression attenuates TRAIL-induced effects, while PUM1 silencing enhances autophagy activation and TRAIL sensitivity. |
siRNA knockdown; immunoprecipitation (p27-CDK2 complex); Western blot; proliferation and apoptosis assays; in vivo xenograft |
Phytomedicine |
Low |
31128486
|
| 2023 |
PUM1 regulates macrophage polarization via the PUM1/Cripto-1 pathway: PUM1 negatively regulates Cripto-1 expression and promotes M1-type macrophage polarization. Allogeneic blood transfusion inhibits ferroptosis in macrophages through effects on this pathway. |
RT-qPCR; Western blot; in vivo mouse model; in vitro RAW264.7 cell experiments; macrophage polarization marker analysis; JC-1 staining |
Aging |
Low |
37387538
|
| 2025 |
PUM1 depletion mildly increases intracellular SARS-CoV-2 viral RNA levels, suggesting a mild antiviral or host-factor regulatory role. PUM1 also negatively regulates innate immunity gene expression both at steady state and during SARS-CoV-2 infection. However, altering PUM1 levels does not affect progeny virion production. |
siRNA/shRNA depletion; viral RNA quantification; innate immunity gene expression assays; progeny virion production assays (plaque/TCID50) |
The Journal of general virology |
Medium |
40956600
|