Affinage

VPS26C

Vacuolar protein sorting-associated protein 26C · UniProt O14972

Length
297 aa
Mass
33.0 kDa
Annotated
2026-06-11
10 papers in source corpus 3 papers cited in narrative 3 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/4 claims corpus-supported (75%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

VPS26C is a subunit of the Retriever endosomal recycling complex that, together with VPS35L and VPS29, selectively returns internalized transmembrane cargo from endosomes to the plasma membrane (PMID:36353989). In hepatocytes, VPS26C-dependent Retriever activity specifically recycles LRP1—but not LDLR—to the cell surface, and liver-specific VPS26C ablation in mice delays postprandial triglyceride clearance and raises plasma triglycerides, defining a role in lipoprotein metabolism (PMID:36353989). The complex acts with cargo selectivity that distinguishes it from the shared CCC-associated subunit VPS35L, which is required for surface expression of both LRP1 and LDLR (PMID:36353989). VPS26C extends this recycling function to other cargo: it directly binds internalized SLC38A1 and sorts it into the recycling pathway, sustaining surface SLC38A1 levels, enhancing glutamine uptake, and promoting temozolomide resistance in glioblastoma cells (PMID:35187626).

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2019 Low

    Establishing whether VPS26C is biologically essential in humans, a homozygous loss-of-function variant was linked to a multisystem developmental disorder, implicating Retriever-mediated recycling in normal growth and neurodevelopment.

    Evidence Genome sequencing, transcript quantification, and co-segregation in two affected cousins

    PMID:31845315

    Open questions at the time
    • Single family with no functional rescue; causation not mechanistically demonstrated
    • No molecular cargo or pathway connected to the clinical phenotype
    • Tissue-level mechanism underlying skeletal and neurodevelopmental defects unknown
  2. 2022 Medium

    Identifying a specific cargo of VPS26C, the protein was shown to directly bind internalized SLC38A1 and route it back to the surface, defining VPS26C as a determinant of nutrient transporter abundance and a driver of glutamine-fueled drug resistance.

    Evidence Co-IP, plasma-membrane proteomics, immunofluorescence, and silencing/rescue in MGMT-deficient GBM cells plus orthotopic mouse model

    PMID:35187626

    Open questions at the time
    • Single lab; binding interface and sorting signal on SLC38A1 not mapped
    • Whether recycling requires the full Retriever complex in this context not tested
    • Generality beyond glioblastoma not established
  3. 2022 High

    Placing VPS26C within the Retriever complex in vivo, liver-specific knockout demonstrated cargo-selective recycling of LRP1 and a defined metabolic phenotype, distinguishing Retriever-specific from CCC-shared subunit functions.

    Evidence Somatic CRISPR/Cas9 liver-specific KO in mice, surface protein quantification, plasma lipid measurements, and VPS26C-deficient hepatoma cell experiments

    PMID:36353989

    Open questions at the time
    • Structural basis for LRP1 versus LDLR cargo selectivity not resolved
    • Recognition motif on LRP1 that VPS26C reads not identified
    • Full spectrum of VPS26C-dependent cargo across tissues unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • How VPS26C selects its diverse cargo (LRP1, SLC38A1) and the structural rules governing Retriever cargo specificity remain undefined.
  • No structural model of VPS26C cargo recognition
  • Mechanism of endosomal recruitment of the Retriever complex via VPS26C unresolved
  • Link between molecular cargo handling and the human disease phenotype not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2
Localization
GO:0005768 endosome 2 GO:0005886 plasma membrane 2
Pathway
R-HSA-5653656 Vesicle-mediated transport 2 R-HSA-9609507 Protein localization 1
Complex memberships
Retriever

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2022 VPS26C (DSCR3) directly binds internalized SLC38A1 and mediates its sorting into the recycling pathway, maintaining SLC38A1 abundance on the plasma membrane and enhancing glutamine uptake in glioblastoma cells; this recycling activity promotes acquired temozolomide resistance. Co-immunoprecipitation, label-free quantitative proteomics of plasma membrane fractions, immunofluorescence, and in vitro silencing/rescue experiments in MGMT-deficient GBM cells and orthotopic mouse model Journal of neuro-oncology Medium 35187626
2022 VPS26C, as a subunit of the Retriever complex (with VPS35L and VPS29), selectively mediates endosomal recycling of LRP1 (but not LDLR) to the hepatocyte cell surface; liver-specific VPS26C ablation in mice delayed postprandial triglyceride clearance and increased plasma triglycerides, while VPS35L (shared between Retriever and CCC) is required for both LDLR and LRP1 surface expression. Somatic CRISPR/Cas9 liver-specific knockout in mice, surface protein quantification, plasma lipid measurements, Western blotting of CCC and Retriever subunit composition, VPS26C-deficient hepatoma cell experiments Arteriosclerosis, thrombosis, and vascular biology High 36353989
2019 A homozygous loss-of-function nonsense variant (p.Glu60*) in VPS26C, a member of the Retriever endosomal recycling complex, causes significantly reduced transcript levels and is associated with a syndrome of neurodevelopmental deficits, growth failure, and skeletal abnormalities in humans, supporting an essential biological role for VPS26C. Genome sequencing, expression studies (transcript quantification), co-segregation analysis in two affected cousins Clinical genetics Low 31845315

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1994 DcrA, a c-type heme-containing methyl-accepting protein from Desulfovibrio vulgaris Hildenborough, senses the oxygen concentration or redox potential of the environment. Journal of bacteriology 65 8288528
1997 Targeted gene-replacement mutagenesis of dcrA, encoding an oxygen sensor of the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Microbiology (Reading, England) 43 9202456
1992 Nucleotide sequence of dcrA, a Desulfovibrio vulgaris Hildenborough chemoreceptor gene, and its expression in Escherichia coli. Journal of bacteriology 24 1548224
2005 Biophysical properties of a c-type heme in chemotaxis signal transducer protein DcrA. Biochemistry 20 16285745
2002 DcrA and dcrB Escherichia coli genes can control DNA injection by phages specific for BtuB and FhuA receptors. Research in microbiology 19 12558182
2005 Identification of Chlamydia trachomatis genomic sequences recognized by chlamydial divalent cation-dependent regulator A (DcrA). Journal of bacteriology 17 15629915
2022 Cargo-Specific Role for Retriever Subunit VPS26C in Hepatocyte Lipoprotein Receptor Recycling to Control Postprandial Triglyceride-Rich Lipoproteins. Arteriosclerosis, thrombosis, and vascular biology 14 36353989
1994 Membrane topology of the methyl-accepting chemotaxis protein DcrA from Desulfovibrio vulgaris Hildenborough. Antonie van Leeuwenhoek 8 8060126
2022 Recycling of SLC38A1 to the plasma membrane by DSCR3 promotes acquired temozolomide resistance in glioblastoma. Journal of neuro-oncology 7 35187626
2019 VPS26C homozygous nonsense variant in two cousins with neurodevelopmental deficits, growth failure, skeletal abnormalities, and distinctive facial features. Clinical genetics 5 31845315

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