Affinage

CCDC22

Coiled-coil domain-containing protein 22 · UniProt O60826

Length
627 aa
Mass
70.8 kDa
Annotated
2026-06-09
21 papers in source corpus 4 papers cited in narrative 4 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CCDC22 is a core subunit of the CCC (COMMD/CCDC22/CCDC93) complex that governs endosomal protein recycling and inflammatory signaling (PMID:23563313, PMID:31537807). It binds directly to all COMMD family proteins, and the CCDC22-COMMD4 interaction at a conserved interaction surface is essential for assembly of the CCC complex (PMID:23563313, PMID:40448120). Within endosomal recycling, the CCC complex controls PI(3)P homeostasis by regulating the phosphorylation and endosomal recruitment of the PI(3)P phosphatase MTMR2; loss of CCC integrity elevates endosomal PI(3)P, drives excess WASH complex recruitment and F-actin, and traps internalized receptors (PMID:31537807). CCC integrity, rather than the related retriever complex with which it shares the VPS35L subunit, is specifically required for this PI(3)P regulation (PMID:31537807). In parallel, CCDC22 acts together with COMMD8 to direct ubiquitination and degradation of IκB proteins, thereby promoting NF-κB activation (PMID:23563313). Loss-of-function CCDC22 mutations decrease CCDC22 protein levels, impair COMMD binding and CCC assembly, blunt IκB turnover and NF-κB signaling, and dysregulate WASH expression, and cause X-linked intellectual disability / Ritscher-Schinzel (3C) syndrome (PMID:23563313, PMID:24916641, PMID:40448120).

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2013 High

    Established CCDC22 as a COMMD-binding protein with a direct role in inflammatory signaling, answering how a disease gene of unknown function connects to a defined molecular pathway.

    Evidence Co-IP of COMMD proteins with CCDC22 and patient-derived lymphoblastoid assays of IκB ubiquitination, degradation, and NF-κB activation

    PMID:23563313

    Open questions at the time
    • Does not define how CCDC22-COMMD complexes select IκB for ubiquitination
    • Structural basis of CCDC22-COMMD binding not resolved
  2. 2014 Medium

    Linked a CCDC22 missense variant to altered WASH complex protein levels, extending CCDC22 function from NF-κB signaling toward endosomal recycling machinery.

    Evidence Western blot of patient-derived lymphoblastoid lines showing decreased CCDC22 and increased WASH1, with exome sequencing validation

    PMID:24916641

    Open questions at the time
    • Single lab, limited mechanistic follow-up
    • Causal mechanism linking CCDC22 loss to WASH1 elevation not established
  3. 2019 High

    Defined the molecular mechanism by which the CCC complex regulates endosomal recycling, showing it controls PI(3)P levels via MTMR2 and thereby tunes WASH-driven actin and receptor trafficking.

    Evidence CCC depletion with PI(3)P measurement, F-actin quantification, receptor recycling assays, MTMR2 fractionation/imaging, and genetic epistasis with retriever subunits

    PMID:31537807

    Open questions at the time
    • How CCC regulates MTMR2 phosphorylation mechanistically is unresolved
    • Direct enzymatic or catalytic role of CCDC22 itself not defined
  4. 2025 Medium

    Identified the CCDC22-COMMD4 interaction surface as essential for CCC assembly, explaining how specific patient missense mutations disrupt complex integrity.

    Evidence Complex assembly assays and Co-IP in cells expressing CCDC22 p.E208K and p.P172R mutants, with clinical correlation to attenuated 3C syndrome

    PMID:40448120

    Open questions at the time
    • No high-resolution structure of the interaction surface
    • Single lab; functional consequences for PI(3)P/NF-κB not tested for these specific mutants

Open questions

Synthesis pass · forward-looking unresolved questions
  • How CCDC22's two reported activities — endosomal PI(3)P/recycling control and IκB ubiquitination for NF-κB — are coordinated within or between distinct CCDC22-containing assemblies remains unresolved.
  • No structural model integrating CCC assembly with substrate selection
  • Mechanism connecting endosomal function to NF-κB signaling not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2
Localization
GO:0005768 endosome 1
Pathway
R-HSA-162582 Signal Transduction 1 R-HSA-5653656 Vesicle-mediated transport 1
Complex memberships
CCC complex (COMMD/CCDC22/CCDC93)

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 All COMMD family proteins bind directly to CCDC22; an XLID-associated CCDC22 mutation decreases CCDC22 protein expression and impairs its binding to COMMD proteins. CCDC22, together with COMMD8, directs the ubiquitination and degradation of IκB proteins, thereby promoting NF-κB activation. Patient-derived cells show impaired NF-κB activation due to decreased IκB ubiquitination and degradation. Co-immunoprecipitation of COMMD proteins with CCDC22; patient-derived lymphoblastoid cell lines assayed for IκB ubiquitination, degradation, and NF-κB activation; CCDC22 mutant protein expression analysis by western blot The Journal of clinical investigation High 23563313
2019 The CCC complex (CCDC22/CCDC93/COMMD proteins) controls endosomal PI(3)P levels by regulating the phosphorylation and endosomal recruitment of the PI(3)P phosphatase MTMR2. CCC depletion elevates endosomal PI(3)P, leading to enhanced WASH complex recruitment and activation, excess endosomal F-actin, and trapping of internalized receptors. CCC and retriever share the common subunit VPS35L, but CCC integrity (not retriever) is specifically required for normal PI(3)P homeostasis. CCC complex depletion (siRNA/KO) with PI(3)P measurement, F-actin quantification, receptor recycling assays, phosphorylation and endosomal recruitment of MTMR2 assessed by fractionation and imaging, epistasis with retriever subunits Nature communications High 31537807
2014 A missense variant in CCDC22 (p.Tyr557Cys) causes decreased CCDC22 protein expression and increased WASH1 expression in patient-derived lymphoblastoid cell lines, linking CCDC22 to regulation of the WASH complex in the context of endosomal recycling. Western blot of patient-derived immortalized lymphoblastoid cell lines showing altered CCDC22 and WASH1 protein levels; whole-exome sequencing and Sanger validation European journal of human genetics : EJHG Medium 24916641
2025 CCDC22 missense mutations p.E208K and p.P172R impair CCC complex assembly by disrupting a conserved interaction surface required for CCDC22-COMMD4 binding, demonstrating that the CCDC22-COMMD4 interaction is essential for CCC complex integrity. Biochemical analysis of CCC complex assembly in cells expressing CCDC22 mutants; Co-IP to assess CCDC22-COMMD4 binding; clinical correlation with attenuated 3C syndrome phenotype BMC medical genomics Medium 40448120

Source papers

Stage 0 corpus · 21 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2019 Endosomal PI(3)P regulation by the COMMD/CCDC22/CCDC93 (CCC) complex controls membrane protein recycling. Nature communications 97 31537807
2013 CCDC22 deficiency in humans blunts activation of proinflammatory NF-κB signaling. The Journal of clinical investigation 91 23563313
2008 Biological hydrogen production by immobilized cells of Clostridium tyrobutyricum JM1 isolated from a food waste treatment process. Bioresource technology 47 18248983
2014 Missense variant in CCDC22 causes X-linked recessive intellectual disability with features of Ritscher-Schinzel/3C syndrome. European journal of human genetics : EJHG 46 24916641
2020 Lactobacillus gasseri JM1 with potential probiotic characteristics alleviates inflammatory response by activating the PI3K/Akt signaling pathway in vitro. Journal of dairy science 26 32600763
2001 Sanguinarine induces bimodal cell death in K562 but not in high Bcl-2-expressing JM1 cells. Pathology, research and practice 26 11770015
2022 Lactobacillus gasseri JM1 Isolated from Infant Feces Alleviates Colitis in Mice via Protecting the Intestinal Barrier. Nutrients 24 36615796
2023 The Probiotic Combination of Lacticaseibacillus paracasei JY062 and Lactobacillus gasseri JM1 Alleviates Gastrointestinal Motility Disorder via Improving Gut Microbiota. Nutrients 20 36839197
2023 The probiotic fermented milk of Lacticaseibacillus paracasei JY062 and Lactobacillus gasseri JM1 alleviates constipation via improving gastrointestinal motility and gut microbiota. Journal of dairy science 20 37923200
2021 Expansion of the CCDC22 associated Ritscher-Schinzel/3C syndrome and review of the literature: Should the minimal diagnostic criteria be revised? European journal of medical genetics 17 34020006
2013 Indirubin-3'-monoxime promotes autophagic and apoptotic death in JM1 human acute lymphoblastic leukemia cells and K562 human chronic myelogenous leukemia cells. Oncology reports 15 23468088
2024 CCDC22 variants caused X-linked focal epilepsy and focal cortical dysplasia. Seizure 12 39426154
2016 Association between rs2294020 in X-linked CCDC22 and susceptibility to autoimmune diseases with focus on systemic lupus erythematosus. Immunology letters 11 27888057
2022 Expanding the pre- and postnatal phenotype of WASHC5 and CCDC22 -related Ritscher-Schinzel syndromes. European journal of medical genetics 9 36130690
2019 Identification of a novel CCDC22 mutation in a patient with severe Epstein-Barr virus-associated hemophagocytic lymphohistiocytosis and aggressive natural killer cell leukemia. International journal of hematology 7 30706328
2020 Characterization of novel neutralizing mouse monoclonal antibody JM1-24-3 developed against MUC18 in metastatic melanoma. Journal of experimental & clinical cancer research : CR 6 33278894
2017 CCDC22 gene polymorphism is associated with advanced stages of endometriosis in a sample of Brazilian women. Journal of assisted reproduction and genetics 2 28470452
2025 CCDC22 mutations that impair COMMD binding cause attenuated 3C/Ritscher-Schinzel syndrome. BMC medical genomics 1 40448120
2017 Draft Genome Sequence of Pantoea agglomerans JM1, a Strain Isolated from Soil Polluted by Industrial Production of Beta-Lactam Antibiotics That Exhibits Valacyclovir-Like Hydrolase Activity. Genome announcements 1 28935728
2026 Integrated proteomics and metabolomics revealed the influence of ultrasonic cavitation effects on the physicochemical properties and metabolic components during Lactobacillus gasseri JM1 fermentation in soymilk. Ultrasonics sonochemistry 0 41643309
2020 [Ritscher-Schinzel syndrome caused by CCDC22 gene mutation: a case report]. Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics 0 33059814

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