Affinage

CCDC22

Coiled-coil domain-containing protein 22 · UniProt O60826

Length
627 aa
Mass
70.8 kDa
Annotated
2026-04-28
23 papers in source corpus 4 papers cited in narrative 4 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CCDC22 is a core subunit of the CCC (COMMD/CCDC22/CCDC93) complex that functions in endosomal protein recycling and NF-κB signaling. CCDC22 directly binds all ten COMMD proteins—with COMMD4 binding being critical for complex integrity—and acts together with COMMD8 to facilitate IκB ubiquitination and degradation, thereby promoting NF-κB activation (PMID:23563313, PMID:40448120). In the endosomal compartment, the CCC complex controls phosphatidylinositol-3-phosphate (PI(3)P) levels by regulating phosphorylation and recruitment of the PI(3)P phosphatase MTMR2; loss of CCC function elevates endosomal PI(3)P, leading to excessive WASH-dependent actin nucleation and trapping of internalized receptors (PMID:31537807). X-linked intellectual disability (XLID)-associated missense mutations in CCDC22 reduce protein expression and disrupt COMMD binding, establishing CCDC22 as a causative gene for this disorder (PMID:23563313, PMID:24916641).

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2013 High

    Establishing CCDC22 as a COMMD-binding protein and NF-κB regulator resolved how COMMD proteins are physically assembled and linked to IκB degradation.

    Evidence Reciprocal co-immunoprecipitation, patient-derived cell lines with XLID-associated CCDC22 mutation, NF-κB reporter assays

    PMID:23563313

    Open questions at the time
    • Structural basis of CCDC22–COMMD interaction not resolved
    • Mechanism by which CCDC22/COMMD8 facilitates IκB ubiquitination (E3 ligase identity) not identified
    • Whether CCDC22 has additional functions beyond NF-κB signaling was unknown
  2. 2014 Medium

    Identification of an additional CCDC22 missense variant (p.Tyr557Cys) in XLID patients linked reduced CCDC22 protein to increased WASH1 expression, revealing an endosomal trafficking axis upstream of the WASH complex.

    Evidence Western blot of patient-derived lymphoblastoid cell lines, whole-exome sequencing

    PMID:24916641

    Open questions at the time
    • Single-method (Western blot) observation in one patient cell line; awaits independent replication
    • Mechanism connecting CCDC22 loss to WASH1 upregulation was not determined
  3. 2019 High

    Demonstrating that the CCC complex controls endosomal PI(3)P through MTMR2 phosphatase recruitment explained how CCDC22 loss leads to excessive WASH-driven actin nucleation and receptor trapping, unifying the NF-κB and endosomal recycling functions under a single complex.

    Evidence siRNA depletion, phosphoinositide quantification, co-immunoprecipitation, fluorescence microscopy, endosomal fractionation, F-actin staining

    PMID:31537807

    Open questions at the time
    • Whether CCDC22 directly contacts MTMR2 or acts through other CCC subunits is unclear
    • Identity of cargo receptors whose recycling depends specifically on CCDC22 was not catalogued
    • Relationship between PI(3)P regulation and NF-κB signaling roles of CCC not established
  4. 2025 Medium

    Mapping disease-associated CCDC22 mutations to a conserved COMMD4-binding surface established the structural requirement for CCDC22–COMMD4 interaction in CCC complex assembly.

    Evidence Co-immunoprecipitation with mutant CCDC22 constructs (E208K, P172R), complex assembly assays

    PMID:40448120

    Open questions at the time
    • Atomic-resolution structure of CCDC22–COMMD4 interface not yet determined
    • Whether these mutations differentially affect endosomal versus NF-κB functions remains untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • Open questions include the high-resolution structure of the intact CCC complex, whether CCDC22 has catalytic or scaffolding activity independent of COMMD proteins, and how the PI(3)P regulatory and NF-κB signaling functions of CCC are coordinated in vivo.
  • No atomic structure of full CCC complex
  • No in vivo animal model specifically testing CCDC22 endosomal function
  • Relationship between CCC-retriever supercomplex and CCDC22-specific contributions not dissected

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 3
Localization
GO:0005768 endosome 2
Pathway
R-HSA-5653656 Vesicle-mediated transport 2 R-HSA-162582 Signal Transduction 1
Complex memberships
CCC (COMMD/CCDC22/CCDC93)

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 All COMMD proteins bind to CCDC22, and an XLID-associated CCDC22 mutation decreases CCDC22 protein expression and impairs its binding to COMMD proteins. CCDC22 participates in NF-κB activation by facilitating IκB ubiquitination and degradation, acting in conjunction with COMMD8. Co-immunoprecipitation, patient-derived cell lines, Western blot, NF-κB reporter assays The Journal of clinical investigation High 23563313
2019 The CCC complex (CCDC22/CCDC93/COMMD proteins) regulates endosomal phosphatidylinositol-3-phosphate (PI(3)P) levels by controlling phosphorylation and endosomal recruitment of the PI(3)P phosphatase MTMR2. CCC depletion leads to elevated endosomal PI(3)P, enhanced WASH recruitment and activation, excess F-actin at endosomes, and trapping of internalized receptors. CCC and retriever share a common subunit VPS35L. siRNA depletion, phosphoinositide quantification, Co-immunoprecipitation, fluorescence microscopy, endosomal fractionation, F-actin staining Nature communications High 31537807
2014 A missense variant (p.Tyr557Cys) in CCDC22 leads to decreased CCDC22 protein expression and increased WASH1 expression in patient lymphoblastoid cell lines, placing CCDC22 upstream of WASH1 in endosomal recycling. Western blot of patient-derived immortalized lymphoblastoid cell lines, whole-exome sequencing European journal of human genetics : EJHG Medium 24916641
2025 CCDC22 missense mutations p.E208K and p.P172R impair CCC complex assembly by disrupting a conserved interaction surface required for CCDC22-COMMD4 binding, demonstrating that CCDC22 directly binds COMMD4 for complex integrity. Co-immunoprecipitation, mutant protein expression, complex assembly assays BMC medical genomics Medium 40448120

Source papers

Stage 0 corpus · 23 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2019 Endosomal PI(3)P regulation by the COMMD/CCDC22/CCDC93 (CCC) complex controls membrane protein recycling. Nature communications 94 31537807
2013 CCDC22 deficiency in humans blunts activation of proinflammatory NF-κB signaling. The Journal of clinical investigation 90 23563313
2008 Biological hydrogen production by immobilized cells of Clostridium tyrobutyricum JM1 isolated from a food waste treatment process. Bioresource technology 47 18248983
2014 Missense variant in CCDC22 causes X-linked recessive intellectual disability with features of Ritscher-Schinzel/3C syndrome. European journal of human genetics : EJHG 45 24916641
2001 Sanguinarine induces bimodal cell death in K562 but not in high Bcl-2-expressing JM1 cells. Pathology, research and practice 26 11770015
2020 Lactobacillus gasseri JM1 with potential probiotic characteristics alleviates inflammatory response by activating the PI3K/Akt signaling pathway in vitro. Journal of dairy science 25 32600763
2022 Lactobacillus gasseri JM1 Isolated from Infant Feces Alleviates Colitis in Mice via Protecting the Intestinal Barrier. Nutrients 23 36615796
2023 The probiotic fermented milk of Lacticaseibacillus paracasei JY062 and Lactobacillus gasseri JM1 alleviates constipation via improving gastrointestinal motility and gut microbiota. Journal of dairy science 20 37923200
2023 The Probiotic Combination of Lacticaseibacillus paracasei JY062 and Lactobacillus gasseri JM1 Alleviates Gastrointestinal Motility Disorder via Improving Gut Microbiota. Nutrients 17 36839197
2021 Expansion of the CCDC22 associated Ritscher-Schinzel/3C syndrome and review of the literature: Should the minimal diagnostic criteria be revised? European journal of medical genetics 16 34020006
2013 Indirubin-3'-monoxime promotes autophagic and apoptotic death in JM1 human acute lymphoblastic leukemia cells and K562 human chronic myelogenous leukemia cells. Oncology reports 15 23468088
2024 CCDC22 variants caused X-linked focal epilepsy and focal cortical dysplasia. Seizure 12 39426154
2016 Association between rs2294020 in X-linked CCDC22 and susceptibility to autoimmune diseases with focus on systemic lupus erythematosus. Immunology letters 11 27888057
2022 Expanding the pre- and postnatal phenotype of WASHC5 and CCDC22 -related Ritscher-Schinzel syndromes. European journal of medical genetics 8 36130690
2019 Identification of a novel CCDC22 mutation in a patient with severe Epstein-Barr virus-associated hemophagocytic lymphohistiocytosis and aggressive natural killer cell leukemia. International journal of hematology 7 30706328
2020 Characterization of novel neutralizing mouse monoclonal antibody JM1-24-3 developed against MUC18 in metastatic melanoma. Journal of experimental & clinical cancer research : CR 6 33278894
2022 2,4-Diacetylphloroglucinol producing Pseudomonas fluorescens JM-1 for management of ear rot disease caused by Fusarium moniliforme in Zea mays L. 3 Biotech 2 35646503
2017 CCDC22 gene polymorphism is associated with advanced stages of endometriosis in a sample of Brazilian women. Journal of assisted reproduction and genetics 2 28470452
2025 CCDC22 mutations that impair COMMD binding cause attenuated 3C/Ritscher-Schinzel syndrome. BMC medical genomics 1 40448120
2022 CCDC22 and CCDC93, two potential retriever-interacting proteins, are required for root and root hair growth in Arabidopsis. Frontiers in plant science 1 36618652
2017 Draft Genome Sequence of Pantoea agglomerans JM1, a Strain Isolated from Soil Polluted by Industrial Production of Beta-Lactam Antibiotics That Exhibits Valacyclovir-Like Hydrolase Activity. Genome announcements 1 28935728
2026 Integrated proteomics and metabolomics revealed the influence of ultrasonic cavitation effects on the physicochemical properties and metabolic components during Lactobacillus gasseri JM1 fermentation in soymilk. Ultrasonics sonochemistry 0 41643309
2020 [Ritscher-Schinzel syndrome caused by CCDC22 gene mutation: a case report]. Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics 0 33059814