| 2006 |
UFSP2 (and UFSP1) are novel thiol proteases that specifically process the C-terminal extension of UFM1 but not ubiquitin, SUMO-1, or ISG15. The active-site Cys residue is essential: replacement of conserved Cys with Ser abolishes activity, and UFSP2 can be covalently labeled with UFM1-vinylmethylester. Both enzymes are sensitive to sulfhydryl-blocking agents (e.g., N-ethylmaleimide) and can release UFM1 from UFM1-conjugated cellular proteins. |
In vitro protease activity assays with recombinant protein, active-site Cys→Ser mutagenesis, covalent labeling with UFM1-vinylmethylester, inhibitor (NEM) sensitivity assays |
The Journal of biological chemistry |
High |
17182609
|
| 2008 |
The crystal structure of mouse UfSP1 at 1.7 Å reveals a novel cysteine protease with a papain-like fold; the catalytic triad is Cys53, Asp175, His177, with Tyr41 forming the oxyanion hole. The Asp-Pro-His configuration defines a new subfamily of cysteine proteases. Mutagenesis of active-site residues confirms their catalytic roles. ITC shows UFM1 binds UfSP1 with KD ≈ 1.6 μM; NMR shows the β3–α2 loop and C-terminal region of UFM1 are involved in binding. |
X-ray crystallography (1.7 Å), active-site mutagenesis, isothermal titration calorimetry, NMR |
The Journal of biological chemistry |
High |
18321862
|
| 2011 |
Crystal structure of mouse UfSP2 at 2.6 Å reveals two domains: a C-terminal catalytic domain (cysteine protease with Cys294, Asp418, His420, Tyr282, and a regulatory loop) and a novel N-terminal domain. The N-terminal domain is required for recognition of the cellular substrate C20orf116 (DDRGK1/UFBP1) and for recruitment of UfSP2 to the endoplasmic reticulum where C20orf116 localizes. The BHD-associated mutation Y290H (equivalent position) abolishes catalytic activity, providing structural basis for disease. |
X-ray crystallography (2.6 Å), active-site mutagenesis, subcellular localization experiments, domain deletion/mutation analysis |
The Journal of biological chemistry |
High |
21228277
|
| 2014 |
In the absence of estradiol (E2), UFSP2 binds the nuclear receptor coactivator ASC1 and maintains it in a non-UFMylated state. E2 induces ERα binding to ASC1, which displaces UFSP2, allowing polyufmylation of ASC1. UFSP2 knockdown promotes ERα-mediated tumor formation in vivo, an effect abrogatable by tamoxifen. |
Co-immunoprecipitation, knockdown (siRNA/shRNA), in vivo tumor formation assays, promoter ChIP, reconstitution experiments |
Molecular cell |
High |
25219498
|
| 2014 |
In C. elegans, ODR-8/UfSP2 (the ortholog of UFSP2) and ODR-4 physically interact at the ER membrane in chemosensory neurons and together promote GPCR (ODR-10) maturation/export from the ER. This function is independent of UfSP2 protease activity: catalytically dead ODR-8/UfSP2 mutants rescue all odr-8 phenotypes. Human ODR4 and UFSP2 also physically interact, suggesting evolutionary conservation. Deletion of C. elegans ufm-1 does not affect chemoreceptor trafficking, demonstrating a UFM1-independent role. |
Genetic epistasis (C. elegans mutants), co-immunoprecipitation (human proteins), rescue experiments with catalytic mutants, GPCR localization assays |
PLoS genetics |
High |
24603482
|
| 2015 |
A UFSP2 missense mutation p.Tyr290His (c.868T>C) segregates with Beukes hip dysplasia in all 17 affected family members. In vitro functional assays with purified recombinant wild-type and mutant UFSP2 demonstrate that the Y290H substitution abolishes UFSP2-mediated C-terminal cleavage of UFM1, establishing loss of proteolytic function as the disease mechanism. |
In vitro protease activity assay with recombinant wild-type and p.Y290H UFSP2, linkage analysis, Sanger sequencing |
South African medical journal |
High |
26428751
|
| 2016 |
In the absence of UFSP2, ectopic co-expression of E3 components UFL1 and UFBP1 dramatically increases UFM1-conjugate formation at the ER, establishing UFSP2 as the primary deconjugating enzyme controlling UFM1 modification levels at the ER. |
UFSP2 knockout/knockdown combined with UFL1+UFBP1 overexpression, immunoblotting for UFM1 conjugates, subcellular fractionation |
FEBS letters |
Medium |
27926783
|
| 2016 |
The C. elegans UfSP crystal structure reveals an N-terminal MPN domain (136 residues extra vs. UfSP2) that lacks metalloprotease activity but is required for recognition and deufmylation of the substrate UfBP1, and also for ER localization of cUfSP. |
X-ray crystallography, domain deletion mutagenesis, substrate deufmylation assay, subcellular localization |
Biochemical and biophysical research communications |
High |
27240952
|
| 2018 |
A novel UFSP2 heterozygous missense mutation p.D426A (c.1277A>C) causes spondyloepimetaphyseal dysplasia. Asp426 is a catalytic residue in the active site, and the mutation is predicted (and consistent with prior in vitro data for related mutations) to inactivate UFSP2 proteolytic activity, extending the genotype-phenotype relationship to different skeletal dysplasia presentations. |
Exome sequencing, structural mapping of mutant to catalytic site, comparison to prior in vitro functional data |
Clinical genetics |
Medium |
28892125
|
| 2021 |
A homozygous UFSP2 variant p.V115E reduces UFSP2 protein abundance and increases UFMylated targets in patient-derived fibroblasts, indicating impaired de-UFMylation. Reconstitution of patient-derived fibroblasts with wild-type UFSP2 reduces UFMylation marks. Structural analysis shows V115 localizes to the N-terminal domain, distinct from catalytic-domain mutations causing skeletal dysplasia. |
Immunoblotting of patient fibroblasts, wild-type UFSP2 reconstitution rescue experiment, structural domain mapping |
Genetics in medicine |
Medium |
33473208
|
| 2022 |
Human UFSP2, but not UFSP1, specifically removes UFM1 from the ribosomal subunit RPL26. UFSP2 is also the primary protease for UFM1 maturation, though UFSP1 (translated from a non-canonical start site) acts earlier in the pathway. Cells lacking both UFSPs show complete loss of UFMylation due to absence of mature UFM1. |
UFSP1/UFSP2 double-knockout cells, immunoblotting for UFM1 maturation and RPL26 UFMylation, reconstitution experiments, biochemical fractionation |
Cell reports |
High |
35926457
|
| 2022 |
UFMylation of ERα at Lys171 and Lys180 promotes ERα stability by inhibiting its ubiquitination; UFSP2 knockdown (which elevates UFMylation) dramatically increases ERα stability, while the ufmylation-deficient ERα 2KR mutant is destabilized and shows abrogated E2-induced transactivity and downstream gene expression. |
UFSP2 knockdown, ERα K171R/K180R mutagenesis, ubiquitination assay, luciferase transactivation assay, colony formation |
Molecules and cells |
Medium |
35680375
|
| 2022 |
A UFM1 α-chloroacetyl activity-based probe selectively and covalently modifies the active-site cysteine of UFSP2 in cellulo, demonstrating that UFSP2 is the dominant active de-UFMylase accessible in living cells. |
Chemical biology/activity-based protein profiling with UFM1 electrophilic probes in cell lysates and living cells |
ACS central science |
Medium |
35756382
|
| 2022 |
UfSP2 binds to the MRN complex in the absence of DNA double-strand breaks (DSBs). After irradiation, ATM phosphorylates UfSP2, causing its dissociation from MRN. WIP1 phosphatase removes this phosphorylation, allowing UfSP2 recruitment to DSBs where it deufmylates histone H4 and suppresses ATM activation in a negative-feedback manner. |
Co-immunoprecipitation, irradiation-induced foci formation assays, phosphorylation assays, WIP1 inhibition/knockdown, ATM kinase assay |
Genome instability & disease |
Medium |
36042814
|
| 2023 |
PD-L1 is a UFMylation substrate; UFMylation destabilizes PD-L1 by synergizing with its ubiquitination. UFSP2 inhibition (via a covalent inhibitor) promotes PD-L1 UFMylation and enhances anti-tumor immunity in combination with PD-1 blockade. |
UFMylation assay, PD-L1 stability assays, UFSP2 covalent inhibitor, in vitro and in vivo immune killing assays, immunoprecipitation |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
36893266
|
| 2024 |
Overexpression of UFSP2 (de-UFMylase) protects nascent DNA strands from degradation and confers resistance to PARP inhibitors in BRCA1/2-deficient cells, by reversing PTIP UFMylation at K148 that would otherwise promote MRE11 recruitment and fork degradation. |
UFSP2 overexpression, fork degradation assay (DNA fiber), PARP inhibitor resistance assay, genetic epistasis with UFL1 knockdown |
Nature chemical biology |
Medium |
38649452
|
| 2024 |
In UFSP2 knockout neurons, the DNA damage response and unfolded protein response are perturbed, linking UFSP2-mediated de-UFMylation to these cellular stress pathways. |
CRISPR-Cas9 UFSP2 knockout in gene-edited neurons, functional assays for DNA damage response and UPR |
Molecular neurodegeneration |
Medium |
39696466
|
| 2026 |
UFSP2 interacts with the ER-anchored protein C1orf27, which recruits UFSP2 to the ER. UFSP2 protease activity is dispensable for ER recruitment but required for ER export of GPCRs. UFSP2, C1orf27, and cargo GPCRs form a multi-protein complex at the ER, and GPCR interaction with C1orf27 is required for ER export. |
Co-immunoprecipitation, catalytic mutant rescue experiments, GPCR ER-export assays, structural analysis, subcellular localization |
iScience |
Medium |
42088365
|
| 2026 |
UFSP2 deficiency leads to accumulation of UFMylated mitochondrial ribosome, ETC, and pyruvate dehydrogenase (PDH) complex components. DLAT (E2 subunit of PDH) is a direct UFMylation substrate at K118; K118R mutation abolishes DLAT UFMylation and reduces pyruvate oxidation, establishing that UFMylation activates PDH and that UFSP2 negatively regulates this modification. |
Quantitative proteomics in UFSP2-deficient cells, site-directed mutagenesis (K118R), PDH enzymatic activity assay, glucose oxidation/TCA flux assays, mitochondrial respiration (Seahorse) |
bioRxivpreprint |
Medium |
41890053
|
| 2026 |
Cryo-EM analysis and biochemical assays with synthetic ufmylated histones (H4K31UFM1) show that neither UFSP1 nor UFSP2 can efficiently cleave H4 UFMylation at K31 in the nucleosome context, likely due to steric hindrance imposed by the nucleosome around the isopeptide bond. |
Cryo-EM structure of H4K31UFM1-nucleosome, in vitro deufmylation assay with recombinant UFSP1 and UFSP2, chemoenzymatic synthesis of ufmylated histones |
ACS chemical biology |
Medium |
41964563
|
| 2025 |
UFM1 signaling promotes NHEJ by UFMylating Ku70; XRCC4 engages UFMylated Ku70 via a non-canonical UFM1-binding region (identified by NMR and photo-crosslinkable UFM1 probe) to promote chromatin assembly of NHEJ factors. UFSP2 depletion (which elevates UFMylation) was used to demonstrate that perturbation of UFM1 signaling impairs these DSB-repair processes. |
Proximity-dependent proteomics, photo-crosslinkable UFM1 probe, NMR, UFSP2 depletion, NHEJ reporter assay, patient-derived fibroblasts |
bioRxivpreprint |
Medium |
bio_10.1101_2025.06.16.659844
|