| 2011 |
DDRGK1 (UFBP1) localizes to the endoplasmic reticulum in a UFBP1-dependent manner and interacts with UFM1. siRNA-mediated knockdown of Ufbp1 or Ufm1 enhances apoptosis upon ER stress in pancreatic beta cells, and silencing the E3 enzyme UFL1 produces the same outcome, indicating that UFM1-UFBP1 conjugation is required to prevent ER stress-induced apoptosis. |
Co-localization by immunofluorescence, co-immunoprecipitation, siRNA knockdown with apoptosis readout |
PloS one |
Medium |
21494687
|
| 2010 |
DDRGK1 interacts with C53/LZAP (CDK5RAP3) and with RCAD (UFL1) as part of a large protein complex. RCAD knockdown leads to proteasome-mediated degradation of both C53/LZAP and DDRGK1, while RCAD overexpression attenuates their ubiquitination, indicating RCAD stabilizes DDRGK1 by protecting it from proteasomal degradation. |
Co-immunoprecipitation, gel filtration, proteasome inhibitor experiments, ubiquitination assays |
The Journal of biological chemistry |
Medium |
20228063
|
| 2013 |
DDRGK1 interacts with IκBα and regulates its stability, thereby modulating NF-κB transcriptional activity. Depletion of DDRGK1 inhibits NF-κB target gene expression and reduces cell proliferation and invasion. |
Co-immunoprecipitation, microarray analysis of NF-κB targets, siRNA knockdown with proliferation/invasion assays |
PloS one |
Low |
23675531
|
| 2017 |
DDRGK1 is an ER membrane protein that stabilizes the ER-stress sensor IRE1α by interacting with the kinase domain of IRE1α, protecting it from degradation. This interaction is dependent on DDRGK1's ufmylation modification. Depletion of DDRGK1 represses IRE1α-XBP1 signaling and activates the PERK-eIF2α-CHOP apoptotic pathway. |
Co-immunoprecipitation (DDRGK1 with IRE1α kinase domain), siRNA knockdown, ufmylation mutant analysis, UPR pathway readouts |
Nature communications |
High |
28128204
|
| 2017 |
DDRGK1 directly binds SOX9 and inhibits its ubiquitination and proteasomal degradation. Loss of DDRGK1 in zebrafish and mouse models decreases SOX9 protein levels and causes defective chondrogenesis; overexpression of sox9 rescues the chondrogenic phenotype caused by ddrgk1 knockdown. |
Co-immunoprecipitation (DDRGK1-SOX9 binding), ubiquitination assay, zebrafish knockdown with genetic rescue, Ddrgk1-/- mouse model with SOX9/Col2a1 readouts |
The Journal of clinical investigation |
High |
28263186
|
| 2015 |
DDRGK1 (UFBP1) is required for embryonic development and hematopoiesis. UFBP1 deficiency causes elevated ER stress, activation of UPR, and cell death in hematopoietic stem/progenitor cells. Additionally, UFBP1 loss suppresses expression of erythroid transcription factors GATA-1 and KLF1, and the transcriptional co-activator ASC1 associates with GATA-1 and Klf1 promoters in a UFBP1-dependent manner. |
Germline and conditional knockout mouse models, ChIP for ASC1 at promoters, siRNA knockdown of Uba5 and ASC1 in K562 cells, UPR/ER stress assays |
PLoS genetics |
High |
26544067
|
| 2019 |
UFBP1 (DDRGK1) promotes plasma cell development by suppressing PERK activation, while the IRE1α/XBP1 axis upregulates UFBP1 expression. Structure-function analysis shows lysine 267 (the main ufmylation site) is required for immunoglobulin production and ER expansion in IRE1α-deficient plasmablasts but is dispensable for plasmablast development itself. |
Conditional knockout mice, UFBP1 K267R mutant knockin/overexpression, plasma cell differentiation assays, ER expansion measurements, immunoglobulin production assays |
Nature communications |
High |
30842412
|
| 2018 |
UFBP1 interacts with approximately 80 proteins (identified by IP-MS) and promotes ubiquitination and degradation of interacting proteins by enhancing their interaction with cognate E3 ligases. Using ANT3 as a model substrate, UFBP1 was shown to enhance the ANT3-E3 ligase interaction, promoting ANT3 ubiquitination and proteasomal degradation. |
Co-immunoprecipitation, label-free quantitative proteomics (IP-MS), proteasome inhibitor assays, protein synthesis inhibition assays, ubiquitination assays |
Journal of proteome research |
Medium |
29533670
|
| 2020 |
UFBP1 promotes K48-linked polyubiquitination and proteasomal degradation of NRF2, thereby suppressing NRF2-driven antioxidant gene expression (AKR1Cs) and enhancing cisplatin sensitivity in gastric cancer cells. |
SILAC quantitative proteomics, ubiquitination assay (K48-linkage specific), siRNA knockdown, overexpression, flow cytometry for ROS, in vivo xenograft experiments |
Oncogene |
Medium |
33219317
|
| 2023 |
DDRGK1 competitively binds KEAP1 to inhibit KEAP1-mediated ubiquitination and proteasomal degradation of NRF2, stabilizing NRF2 and promoting antioxidant responses. DDRGK1 knockout reduces NRF2 stability, causes ROS accumulation, and enhances chemosensitivity to doxorubicin and etoposide in osteosarcoma. |
Quantitative proteomics, co-immunoprecipitation (DDRGK1-KEAP1 competitive binding), DDRGK1 knockout (genetic), ROS measurement, in vivo xenograft experiments |
Advanced science |
Medium |
36965071
|
| 2021 |
DDRGK1 deficiency in MEFs has a dual effect on autophagy: it promotes autophagy induction by impairing mTOR signaling, while simultaneously blocking autophagosome-lysosome fusion. DDRGK1 loss is associated with suppressed lysosomal function including impaired Cathepsin D expression, aberrant lysosomal pH, and v-ATPase accumulation. |
Inducible conditional KO MEFs (4-OHT-driven CreERT2), autophagy flux assays, mTOR activity readouts, lysosomal pH measurement, Cathepsin D assays, v-ATPase analysis |
Cell death & disease |
Medium |
33879777
|
| 2023 |
The UFL1/UFBP1 complex directly interacts with the mTOR/GβL complex and attenuates mTORC1 activity. Ablation of Ufl1 or Ufbp1 in hepatocytes dissociates them from the mTOR/GβL complex and activates mTOR signaling, driving hepatocellular carcinoma development. |
Co-immunoprecipitation (Ufl1/Ufbp1 with mTOR/GβL), hepatocyte-specific conditional KO mice, iTRAQ proteomics, HCC tumor models |
Journal of experimental & clinical cancer research |
Medium |
37131258
|
| 2023 |
Loss of DDRGK1 decreases UFMylation of IRE1α and leads to increased ubiquitylation-mediated IRE1α degradation in chondrocytes, causing ER dysfunction and activating the PERK/CHOP/Caspase3 apoptosis pathway. DDRGK1 K268R-mutant mice confirm the importance of K268 UFMylation for IRE1α stability in vivo. |
Conditional KO mice (Col2a1-ERT Cre), DDRGK1 K268R knockin mice, UFMylation and ubiquitylation assays, PERK/CHOP/Caspase3 pathway analysis |
International journal of biological sciences |
Medium |
37781516
|
| 2021 |
UFBP1 directly binds Smad3 (demonstrated by endogenous co-immunoprecipitation) and suppresses Smad3 phosphorylation. UFBP1 deficiency leads to increased Smad3 phosphorylation and nuclear translocation, without affecting Smad2 phosphorylation, contributing to hepatic fibrosis. |
Endogenous co-immunoprecipitation (UFBP1-Smad3), conditional KO mice, UFBP1 overexpression in HeLa cells, phospho-Smad2/3 analysis |
Frontiers in cell and developmental biology |
Low |
34307359
|
| 2024 |
DDRGK1-UFL1-mediated ER-phagy mitigates ER stress and apoptosis in renal tubular epithelial cells. Overexpression of DDRGK1 in HK-2 cells enhances ER-phagy levels and ameliorates contrast-induced ER stress and apoptosis. |
DDRGK1 overexpression in HK-2 cells, four murine AKI models, ER-phagy flux assays, ER stress and apoptosis markers |
Cell death & disease |
Low |
38233375
|
| 2023 |
Ufmylation on UFBP1 (at K267) is required for alleviating ER stress-dependent lipogenesis in hepatocytes. Wild-type UFBP1 but not UFBP1 K267R mutant rescues lipid accumulation caused by UFBP1 knockdown, and ufmylation on UFBP1 ameliorates hepatic steatosis, dyslipidemia, and insulin resistance in vivo. |
UFBP1 K267R knockin/rescue experiments in vitro, HFD mouse model with WT vs. K267R UFBP1, ER stress markers, lipid accumulation assays |
Cell death & disease |
Medium |
37660122
|
| 2023 |
UFBP1 K268 ufmylation is dispensable for ER stress response in mouse embryonic fibroblasts, embryonic development, cardiac homeostasis, and intestinal homeostasis under DSS-induced colitis. The K268R knockin mutation reduces total ufmylated proteins without altering ER stress signaling or causing morphological abnormalities up to one year of age. |
UFBP1 K268R knockin mice, MEF ER stress assays, serial echocardiography, DSS-induced colitis model |
Cells |
Medium |
37566002
|
| 2009 |
DDRGK1 (Dashurin/C20orf116) contains a C-terminal PCI domain. Cell compartment fractionation showed presence in peroxisomes/mitochondria, microsomes, cytosol, and nucleus. GFP-Dashurin fusion protein shuttles between cytosol and nucleus. Luciferase reporter assays showed 2-3 fold increase in promoter activity upon overexpression. |
Cell fractionation, GFP fusion protein live imaging, luciferase reporter assay |
Biochimica et biophysica acta |
Low |
20036718
|
| 2026 |
XIAP binds to DDRGK1 and increases DDRGK1 protein stability, activating ER-phagy. Noise exposure reduces both XIAP and DDRGK1 protein levels in cochlear cells; gastrodin promotes XIAP expression, increasing DDRGK1 levels and activating ER-phagy to protect cochlear hair cells. |
Co-immunoprecipitation (XIAP-DDRGK1), DDRGK1 stability assays, ER-phagy flux assays, in vivo CBA/CaJ mouse noise exposure model |
Advanced science |
Low |
41588674
|
| 2026 |
DDRGK1 acts as a UFMylation effector that stabilizes FASN by competitively inhibiting its ubiquitination. DDRGK1 K268R mutant mice show reduced FASN protein and are protected from HFD-induced obesity, with 12% reduced body weight and 18% decreased fat mass. |
DDRGK1 K268R knockin mice, HFD model, FASN ubiquitination competitive assay, single-nucleus RNA sequencing, lipidomics, in vitro adipocyte lipid droplet assays |
Advanced science |
Medium |
41671397
|
| 2026 |
DDRGK1 directly interacts with and stabilizes IP3R (inositol trisphosphate receptor), preventing its ubiquitin-mediated degradation. DDRGK1 deficiency reduces IP3R protein levels, impairing mitochondrial calcium uptake and oxidative phosphorylation, and activating CHOP while suppressing PGC-1α-mediated mitochondrial biogenesis. |
Co-immunoprecipitation (DDRGK1-IP3R), ubiquitination assays, respirometry, ATP measurements, calcium uptake assays, CHOP/PGC-1α pathway analysis |
Molecular biology reports |
Low |
42171880
|
| 2024 |
Depletion of DDRGK1 (along with UFL1 and UFM1) in human macrophages results in increased IFN-β production and secretion during Mycobacterium marinum and M. tuberculosis infection, indicating that UFMylation activity (including DDRGK1) is required to suppress Type I IFN signaling during mycobacterial infection. |
Genome-wide CRISPRi screen in human macrophages, siRNA depletion of DDRGK1, IFN-β ELISA, transcriptional profiling |
bioRxivpreprint |
Low |
|