Affinage

SPG21

Maspardin · UniProt Q9NZD8

Round 2 corrected
Length
308 aa
Mass
35.0 kDa
Annotated
2026-04-28
130 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

Maspardin (SPG21/ACP33) is a cytoplasmic and trans-Golgi network/late endosomal protein that functions in intracellular protein transport and sorting (PMID:14564668, PMID:19184135). It contains a noncatalytic alpha/beta hydrolase fold domain that mediates direct interaction with the cytoplasmic tail of CD4, negatively modulating CD4-dependent T cell costimulation (PMID:11113139). Maspardin also binds the aldehyde dehydrogenase ALDH16A1, with which it colocalizes in endosomal/Golgi compartments (PMID:19184135). A homozygous frameshift mutation in SPG21 (601insA) causes Mast syndrome, an autosomal recessive hereditary spastic paraplegia with dementia (PMID:14564668).

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2000 Medium

    The first molecular function attributed to maspardin was as an intracellular negative regulator of CD4 signaling, establishing that its alpha/beta hydrolase fold domain mediates a direct protein–protein interaction rather than catalysis.

    Evidence Yeast two-hybrid screen, co-immunoprecipitation, deletion mutagenesis, and T cell activation assays in vitro

    PMID:11113139

    Open questions at the time
    • Interaction identified in a single lab without independent replication
    • Endogenous complex stoichiometry and physiological relevance in primary T cells not established
    • Whether the hydrolase fold retains any residual catalytic activity remains untested
  2. 2003 High

    Genetic mapping of Mast syndrome to SPG21 established maspardin as essential for neuronal maintenance and linked its loss to hereditary spastic paraplegia with dementia, placing the protein's transport/sorting function in a disease context.

    Evidence Positional cloning in an Amish pedigree with homozygous frameshift mutation (601insA) confirmed across 14 affected individuals

    PMID:14564668

    Open questions at the time
    • Molecular mechanism by which loss of maspardin leads to corticospinal tract degeneration is unknown
    • No rescue experiment or animal model reported in this study
    • Specific cargo sorted by maspardin-containing vesicles not identified
  3. 2009 Medium

    Identification of ALDH16A1 as a maspardin binding partner expanded the protein's interactome beyond CD4 and suggested a functional connection between endosomal/Golgi trafficking and aldehyde metabolism.

    Evidence Immunoprecipitation followed by mass spectrometry, reciprocal co-IP of overexpressed proteins, fusion protein pull-down, and confocal colocalization

    PMID:19184135

    Open questions at the time
    • Functional consequence of the maspardin–ALDH16A1 interaction is unknown
    • Interaction validated only with overexpressed or tagged proteins; endogenous validation at physiological levels lacking
    • Whether ALDH16A1 binding is relevant to the Mast syndrome phenotype is untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • The precise cargo(s) sorted by maspardin in endosomal/trans-Golgi trafficking, the structural basis of its protein interactions, and the cellular pathway connecting maspardin loss to neurodegeneration remain unresolved.
  • No animal or neuronal model characterizing maspardin loss-of-function phenotypes at the cellular level
  • No structural model of maspardin or its complexes
  • Relationship between the CD4 and ALDH16A1 interactions and neuronal function is unclear

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 1
Localization
GO:0005768 endosome 2 GO:0005794 Golgi apparatus 2 GO:0005829 cytosol 1 GO:0031410 cytoplasmic vesicle 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 2 R-HSA-1643685 Disease 1
Partners

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2003 SPG21 encodes maspardin (ACP33), and a single base-pair insertion (601insA) causing premature truncation (fs201-212X213) underlies Mast syndrome (autosomal recessive hereditary spastic paraplegia with dementia), mapping the SPG21 locus to chromosome 15q22.31. The encoded protein was shown to localize to intracellular endosomal/trans-Golgi transportation vesicles, suggesting a role in protein transport and sorting. Genetic mapping in an Amish pedigree, sequence analysis of candidate genes, identification of homozygous frameshift mutation in all 14 affected cases; protein localization noted from prior studies American journal of human genetics High 14564668
2000 ACP33 (maspardin/SPG21 protein) was identified as a novel intracellular binding partner of CD4 via a yeast two-hybrid screen. The interaction is mediated by the noncatalytic alpha/beta hydrolase fold domain of ACP33, and depends on two conserved hydrophobic amino acids at the CD4 carboxyl terminus. Deletion of these CD4 residues abolished ACP33 binding and enhanced CD4-mediated T cell costimulation, suggesting ACP33 modulates the stimulatory activity of CD4. Yeast two-hybrid screen, co-immunoprecipitation, domain mapping by deletion mutagenesis, functional T cell activation assay The Journal of biological chemistry Medium 11113139
2009 Maspardin (SPG21 protein) localizes prominently to cytoplasm and to membranes consistent with trans-Golgi network/late endosomal compartments. Immunoprecipitation of maspardin followed by mass spectrometry identified the aldehyde dehydrogenase ALDH16A1 as a binding partner, confirmed by co-immunoprecipitation of overexpressed proteins and fusion protein pull-down experiments, with colocalization of the two proteins in cells. Immunofluorescence localization, co-immunoprecipitation with mass spectrometry identification, fusion protein pull-down, colocalization by confocal microscopy Neurogenetics Medium 19184135

Source papers

Stage 0 corpus · 130 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2005 Towards a proteome-scale map of the human protein-protein interaction network. Nature 2090 16189514
2012 Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 1718 22658674
1997 Mast cells. Physiological reviews 1606 9354811
2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America 1479 12477932
2017 Architecture of the human interactome defines protein communities and disease networks. Nature 1085 28514442
2014 A proteome-scale map of the human interactome network. Cell 977 25416956
2020 A reference map of the human binary protein interactome. Nature 849 32296183
2003 Complete sequencing and characterization of 21,243 full-length human cDNAs. Nature genetics 754 14702039
2021 Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell 705 33961781
2012 A census of human soluble protein complexes. Cell 689 22939629
2011 Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in bioinformatics 656 21873635
1994 Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. Gene 492 8125298
2015 Widespread macromolecular interaction perturbations in human genetic disorders. Cell 454 25910212
2004 The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome research 438 15489334
2022 OpenCell: Endogenous tagging for the cartography of human cellular organization. Science (New York, N.Y.) 432 35271311
2005 Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Genome research 409 16344560
2021 A proximity-dependent biotinylation map of a human cell. Nature 339 34079125
2006 Development, migration, and survival of mast cells. Immunologic research 313 16760571
1981 The mast cell. Critical reviews in immunology 273 6178551
1976 Mast cells and tumor angiogenesis. International journal of cancer 258 62725
2007 Mast cell proteases. Advances in immunology 254 17869614
2001 Regulation of mast cell survival by IgE. Immunity 252 11420048
2007 hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. Genomics 222 17207965
2011 Next-generation sequencing to generate interactome datasets. Nature methods 200 21516116
2003 Imatinib for systemic mast-cell disease. Lancet (London, England) 198 12932387
1987 The role of mast cells in inflammatory processes: evidence for nerve/mast cell interactions. International archives of allergy and applied immunology 173 2437039
1994 Mast cells: function and contents. Current opinion in immunology 172 8172685
2001 The mast cell in wound healing. Veterinary dermatology 166 11844219
1996 The mast cell: a neuroimmunoendocrine master player. International journal of tissue reactions 162 8880375
2012 Mast cell leukemia. Blood 140 23243287
2018 Endosomal Rab cycles regulate Parkin-mediated mitophagy. eLife 139 29360040
2006 The human mast cell: an overview. Methods in molecular biology (Clifton, N.J.) 135 16110146
1980 Enzymes of the mast cell granule. The Journal of investigative dermatology 133 6771334
2003 Maspardin is mutated in mast syndrome, a complicated form of hereditary spastic paraplegia associated with dementia. American journal of human genetics 128 14564668
2017 Dnmt3a restrains mast cell inflammatory responses. Proceedings of the National Academy of Sciences of the United States of America 125 28167789
2010 Measuring mast cell mediator release. Current protocols in immunology 122 21053305
1983 Heterogeneity of human mast cells. Journal of immunology (Baltimore, Md. : 1950) 120 6194221
2011 Mast cell biology: introduction and overview. Advances in experimental medicine and biology 115 21713648
2007 Toward a confocal subcellular atlas of the human proteome. Molecular & cellular proteomics : MCP 114 18029348
2008 Is there a role for mast cells in psoriasis? Archives of dermatological research 109 18719932
1994 Human mast cell heterogeneity. Allergy proceedings : the official journal of regional and state allergy societies 109 7721078
2014 Molecular targets on mast cells and basophils for novel therapies. The Journal of allergy and clinical immunology 108 24767877
2003 Mast cells in allergy and beyond. The international journal of biochemistry & cell biology 106 12962699
1997 Markers of mast cell degranulation. Methods (San Diego, Calif.) 106 9281467
2018 Mast Cells in Neuroimmune Interactions. Trends in neurosciences 101 30293752
2017 Neuroinflammation, Mast Cells, and Glia: Dangerous Liaisons. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry 100 29283023
2012 Mast cell proteoglycans. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society 98 22899859
2015 Mast cell stabilisers. European journal of pharmacology 92 26130122
2021 AKIRIN2 controls the nuclear import of proteasomes in vertebrates. Nature 90 34711951
2010 Mast cell activation and autism. Biochimica et biophysica acta 85 21193035
2005 Chemokine receptor expression by mast cells. Chemical immunology and allergy 85 16107768
2006 Progesterone inhibits mast cell secretion. International journal of immunopathology and pharmacology 83 17166400
2017 Neuroendocrinology of mast cells: Challenges and controversies. Experimental dermatology 80 28094875
2009 The mast cell: an evolutionary perspective. Biological reviews of the Cambridge Philosophical Society 79 19961471
2020 A trimeric Rab7 GEF controls NPC1-dependent lysosomal cholesterol export. Nature communications 78 33144569
2007 Renin: at the heart of the mast cell. Immunological reviews 77 17498056
1989 Asthma and mast cell activation. The Journal of allergy and clinical immunology 76 2645347
2018 Is it time for a new classification of mast cells? What do we know about mast cell heterogeneity? Immunological reviews 75 29431204
2017 Histamine Release from Mast Cells and Basophils. Handbook of experimental pharmacology 75 28332048
1999 Adenosine, mast cells and asthma. Inflammation research : official journal of the European Histamine Research Society ... [et al.] 75 10442481
2005 Role of oxidants in mast cell activation. Chemical immunology and allergy 74 16107761
2018 Interrogating the protein interactomes of RAS isoforms identifies PIP5K1A as a KRAS-specific vulnerability. Nature communications 73 30194290
2012 Mast cells and cancer: enemies or allies? Polish journal of pathology : official journal of the Polish Society of Pathologists 71 22535614
2006 The role of mast cells in osteoporosis. Seminars in arthritis and rheumatism 70 16887466
2016 Mast Cells and Anaphylaxis. Current allergy and asthma reports 69 26857018
2018 Tryptase as a polyfunctional component of mast cells. Histochemistry and cell biology 67 29532158
2011 Mast cell progenitor trafficking and maturation. Advances in experimental medicine and biology 66 21713649
1984 Mast cell mediators with emphasis on intestinal mast cells. Annals of allergy 66 6095703
2022 Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery. Nature communications 65 35831314
2016 The Mast Cell-IgE Paradox: From Homeostasis to Anaphylaxis. The American journal of pathology 63 26776074
2015 Signal transduction and chemotaxis in mast cells. European journal of pharmacology 63 25941081
2012 Host-pathogen interactome mapping for HTLV-1 and -2 retroviruses. Retrovirology 62 22458338
2012 Cytoskeleton in mast cell signaling. Frontiers in immunology 62 22654883
2018 Role of mast cells and basophils in pruritus. Immunological reviews 61 29431207
2019 Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations. Nature communications 60 31515488
2014 Ancient origin of mast cells. Biochemical and biophysical research communications 59 25094046
2017 Systematic protein-protein interaction mapping for clinically relevant human GPCRs. Molecular systems biology 58 28298427
1990 Arthritis and mast cell activation. The Journal of allergy and clinical immunology 58 2229835
2016 Mast cell glycosaminoglycans. Glycoconjugate journal 57 27900574
2004 Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions. Genome research 57 15342556
2002 Interleukin-6 and mast cells. Allergy and asthma proceedings 57 12476543
2014 Systematic identification of pathological lamin A interactors. Molecular biology of the cell 56 24623722
2014 Maturation of mast cell progenitors to mucosal mast cells during allergic pulmonary inflammation in mice. Mucosal immunology 56 25291985
1989 Histamine, mast cells and ovarian function. The Journal of endocrinology 56 2647889
2010 Mast cells. Current gastroenterology reports 53 20711694
2006 Molecular mechanisms of mast cell development. Immunology and allergy clinics of North America 53 16931285
1987 Activation of basophils and mast cells for mediator release. International archives of allergy and applied immunology 53 3106238
1982 Mastocytosis and the mast cell. Journal of the American Academy of Dermatology 52 7174910
2019 Mast cell chymase: morphofunctional characteristics. Histochemistry and cell biology 50 31392409
2017 Vitamin D contributes to mast cell stabilization. Allergy 49 27998003
1990 Mast cell biology. The Journal of allergy and clinical immunology 49 2229821
2009 Are we ready to downregulate mast cells? Current opinion in immunology 48 19837574
2006 Vagal influences over mast cells. Autonomic neuroscience : basic & clinical 47 16500155
2022 Mast Cells and Acupuncture Analgesia. Cells 46 35269483
2009 Mast cells: makers and breakers of allergic inflammation. Current opinion in allergy and clinical immunology 46 19550301
2018 Patient Perceptions in Mast Cell Disorders. Immunology and allergy clinics of North America 45 30007467
2013 Molecular mechanisms of glucocorticoid action in mast cells. Molecular and cellular endocrinology 44 23707629
2019 Mast Cells in Liver Fibrogenesis. Cells 43 31766207
2018 Mast Cell Activation Syndrome. Clinical reviews in allergy & immunology 43 25944644
2009 Mast cells: target and source of neuropeptides. Current pharmaceutical design 42 19860689
2017 Transcriptional Heterogeneity of Mast Cells and Basophils upon Activation. Journal of immunology (Baltimore, Md. : 1950) 41 28476932
2011 Mast Cell Proteases and Inflammation. Drug discovery today. Disease models 41 22125569
2009 Origin of basophils and mast cells. Allergology international : official journal of the Japanese Society of Allergology 41 19153533
2008 Mast cells and chemokines. Journal of biological regulators and homeostatic agents 41 18842167
1985 The mast cell and bone. Clinical orthopaedics and related research 41 3905113
2002 Lipid rafts in mast cell signaling. Molecular immunology 40 12217391
2022 Anaphylaxis and Mast Cell Disorders. Immunology and allergy clinics of North America 39 34823750
2016 TRPM7 kinase activity regulates murine mast cell degranulation. The Journal of physiology 39 26660477
2015 Mechanisms of glyceryl trinitrate provoked mast cell degranulation. Cephalalgia : an international journal of headache 39 25724914
2015 Distinguishing Mast Cell Progenitors from Mature Mast Cells in Mice. Stem cells and development 38 25744159
2009 Interaction of the SPG21 protein ACP33/maspardin with the aldehyde dehydrogenase ALDH16A1. Neurogenetics 36 19184135
2007 The mast cell: where endocytosis and regulated exocytosis meet. Immunological reviews 36 17498067
2022 Roles of Mast Cells in Cutaneous Diseases. Frontiers in immunology 35 35874756
1994 Mast cell and basophil development. Current opinion in hematology 34 9371257
2002 Regulation of mast cell phenotype by MITF. International archives of allergy and immunology 33 11919417
2000 Cloning of ACP33 as a novel intracellular ligand of CD4. The Journal of biological chemistry 33 11113139
1984 Mast cell heterogeneity. Canadian journal of physiology and pharmacology 33 6204731
2001 Synaptotagmin regulates mast cell functions. Immunological reviews 31 11292024
2014 Immunopharmacological modulation of mast cells. Current opinion in pharmacology 30 25063971
2011 Mast cell apoptosis and survival. Advances in experimental medicine and biology 30 21713651
2006 TGFbeta1 induces mast cell apoptosis. Experimental hematology 30 16647563
1994 Mast cell distribution in rats. Arzneimittel-Forschung 30 8192706
2020 The Art of Mast Cell Adhesion. Cells 29 33322506
2013 Ion channels regulating mast cell biology. Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology 28 23600539
1995 Mast cell ontogeny and apoptosis. Experimental dermatology 28 8528594
2023 Hematopoiesis and Mast Cell Development. International journal of molecular sciences 27 37445862
2015 The phylogenetic profile of mast cells. Methods in molecular biology (Clifton, N.J.) 27 25388242
2013 Impact of capsaicin on mast cell inflammation. International journal of immunopathology and pharmacology 27 24067456
2002 The function of MITF and associated proteins in mast cells. Molecular immunology 27 12217380
2002 Human ocular mast cells. Current opinion in allergy and clinical immunology 27 12582326