Affinage

SPG21

Maspardin · UniProt Q9NZD8

Length
308 aa
Mass
35.0 kDa
Annotated
2026-06-10
23 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SPG21 (maspardin/ACP33) is a cytosolic protein that governs late endosomal/lysosomal homeostasis by acting as a RAB7A effector, and its loss causes the autosomal recessive neurodegenerative disorder Mast syndrome (SPG21) (PMID:14564668, PMID:40833810). Maspardin localizes to endolysosomal membranes through direct binding to GTP-bound RAB7A, a step disrupted by disease-associated variants that reduce SPG21 expression (PMID:40833810, PMID:41400694). At this compartment maspardin selectively restrains the noncanonical mTORC1 substrate TFEB—without affecting canonical substrates ULK1, S6K1, or 4E-BP1—so that SPG21 loss reduces TFEB phosphorylation and drives TFEB nuclear translocation and upregulation of TFEB target genes (PMID:40833810, PMID:41400694). Mechanistically, maspardin loss redistributes RAB7 from retromer-positive late endosomes to lysosomes, weakening RAB7's interaction with the GAP TBC1D5 so that RAB7 remains GTP-loaded, recruiting FYCO1 and promoting anterograde lysosome motility along microtubules (PMID:41400694). The alpha/beta hydrolase fold domain mediates peptide binding rather than catalysis, as first defined through its interaction with the cytoplasmic tail of CD4 (PMID:11113139). In neurons, maspardin is required for normal EGF-EGFR signaling and limits axon branching, and its loss produces excessive axonal branching, impaired neuronal maturation, and progressive motor dysfunction in knockout mice (PMID:20661613, PMID:26978163).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2000 Medium

    Established maspardin as a peptide-binding protein, showing its alpha/beta hydrolase fold acts as a protein-interaction module rather than a catalytic enzyme by binding the cytoplasmic tail of CD4 and dampening T-cell activation.

    Evidence Yeast two-hybrid screen, co-immunoprecipitation, and deletion mutagenesis mapping

    PMID:11113139

    Open questions at the time
    • Relevance of CD4 binding to neuronal/endolysosomal function not connected
    • No catalytic activity demonstrated or excluded for the hydrolase fold
  2. 2003 Medium

    Defined SPG21 as a disease gene by linking a loss-of-function frameshift mutation to Mast syndrome, establishing that maspardin deficiency causes neurodegeneration.

    Evidence Homozygosity mapping and patient DNA sequencing identifying 601insA frameshift in all affected cases

    PMID:14564668

    Open questions at the time
    • Localization inferred from prior work, not directly demonstrated
    • Molecular consequence of mutation on protein function untested at this stage
  3. 2009 Medium

    Provided the first protein-interaction map beyond CD4 and refined subcellular localization to trans-Golgi/late endosomal compartments, identifying ALDH16A1 as a maspardin partner.

    Evidence IP-mass spectrometry, co-IP of overexpressed proteins, fusion protein pull-down, and colocalization imaging

    PMID:19184135

    Open questions at the time
    • Functional significance of the ALDH16A1 interaction unresolved
    • Interaction validated only with overexpressed proteins in a single lab
  4. 2010 Medium

    Connected maspardin loss to a defined neuronal phenotype, showing knockout mice recapitulate progressive motor dysfunction and that maspardin restrains axon branching.

    Evidence Homologous recombination knockout mouse with behavioral testing and primary cortical neuron morphology

    PMID:20661613

    Open questions at the time
    • Molecular pathway linking maspardin to axon branching unidentified
    • Cell-autonomy of the motor phenotype not dissected
  5. 2016 Medium

    Placed maspardin within a growth-factor signaling axis, showing it is required for EGF-induced neuronal growth and EGF-EGFR target gene expression.

    Evidence SPG21-/- primary cortical neuron culture, behavioral tests, and quantitative RT-PCR of EGF signaling targets

    PMID:26978163

    Open questions at the time
    • Direct biochemical link between maspardin and EGFR signaling not established
    • How attenuated EGF signaling relates to endolysosomal function unknown
  6. 2025 High

    Resolved the core molecular mechanism: maspardin is a RAB7A effector that controls RAB7 nucleotide state and lysosome positioning, selectively gating noncanonical mTORC1 phosphorylation of TFEB.

    Evidence Two independent studies using SPG21 knockout/knockdown cells with GTP-specific RAB7 co-IP, TBC1D5/FYCO1 interaction assays, TFEB phosphorylation and nuclear translocation imaging, and lysosome motility assays

    PMID:40833810 PMID:41400694

    Open questions at the time
    • Direct mechanism by which maspardin promotes TFEB phosphorylation at the lysosome not fully defined
    • How disease variants mechanistically impair RAB7 binding beyond reduced expression unresolved
    • Whether the neuronal axon-branching/EGF phenotypes derive from the RAB7-TFEB axis untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unknown how the endolysosomal RAB7-TFEB regulatory role of maspardin mechanistically produces the neuronal axon-branching, EGF-signaling, and progressive motor phenotypes of Mast syndrome.
  • No in vivo demonstration that TFEB dysregulation drives the SPG21 motor phenotype
  • Catalytic versus scaffolding role of the hydrolase fold in RAB7 effector function unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2 GO:0098772 molecular function regulator activity 2
Localization
GO:0005764 lysosome 2 GO:0005768 endosome 2 GO:0005829 cytosol 1

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2000 ACP33/maspardin was identified as a novel intracellular binding partner of CD4 via yeast two-hybrid screen; interaction was confirmed biochemically and mapped to the hydrophobic C-terminal amino acids of CD4. The interaction is mediated by the noncatalytic alpha/beta hydrolase fold domain of ACP33, revealing a peptide-binding function for this domain. ACP33 binding correlates with inhibition of TCR-induced T cell activation. Yeast two-hybrid screen, co-immunoprecipitation, deletion mutagenesis The Journal of biological chemistry Medium 11113139
2003 A single base-pair insertion (601insA) in ACP33/SPG21 causes a frameshift and premature truncation (fs201-212X213) of maspardin, establishing loss-of-function mutation as the cause of Mast syndrome (SPG21). Maspardin was noted to localize to intracellular endosomal/trans-Golgi transportation vesicles, suggesting a role in protein transport and sorting. Sequence analysis of patient DNA, homozygosity mapping, functional annotation from prior localization studies American journal of human genetics Medium 14564668
2009 Maspardin (ACP33/SPG21) localizes prominently to cytoplasm and to membranes, possibly at trans-Golgi network/late endosomal compartments. Immunoprecipitation coupled with mass spectrometry identified the aldehyde dehydrogenase ALDH16A1 as a maspardin-interacting protein; this interaction was confirmed by co-immunoprecipitation of overexpressed proteins and fusion protein pull-down assays, and the two proteins colocalize in cells. Immunoprecipitation, mass spectrometry, co-IP of overexpressed proteins, fusion protein pull-down, colocalization imaging Neurogenetics Medium 19184135
2010 SPG21 knockout mice generated by homologous recombination develop gradually progressive hind limb dysfunction. Cultured cerebral cortical neurons from SPG21-/- mice exhibit significantly more axonal branching than wild-type neurons, indicating a role for maspardin in regulating axon branching. Homologous recombination knockout mouse, behavioral testing, primary cortical neuron culture, morphological analysis Neurogenetics Medium 20661613
2016 Loss of maspardin in SPG21-/- mice attenuates growth, axonal branching, and maturation of primary cortical neurons. SPG21-/- neurons fail to respond to EGF-induced growth, correlating with reduced expression of EGF-EGFR signaling target genes, suggesting maspardin is required for EGF signaling in neurons. SPG21-/- mouse model, primary cortical neuron culture, beam walk/ledge/hind limb clasp behavioral tests, quantitative RT-PCR Neuro-degenerative diseases Medium 26978163
2025 Maspardin/SPG21 localizes to endolysosomes via direct interaction with GTP-bound RAB7A. SPG21 depletion does not affect canonical mTORC1 substrates (ULK1, S6K1, 4E-BP1) but specifically reduces phosphorylation of the noncanonical mTORC1 substrate TFEB, leading to enhanced TFEB nuclear translocation and upregulation of a subset of TFEB-target genes. Disease-associated SPG21 variants reduce SPG21 expression and disrupt its endolysosomal localization. Co-immunoprecipitation, subcellular fractionation/localization, knockdown/knockout biochemical assays, phosphorylation assays, nuclear localization imaging, functional dependency analysis Molecular biology of the cell High 40833810
2025 Maspardin/SPG21 associates with the late endosomal/lysosomal membrane and binds RAB7 GTPase. In SPG21 knockout cells, decreased TFEB phosphorylation leads to TFEB nuclear translocation. Mechanistically, SPG21 loss causes redistribution of RAB7 from retromer-positive late endosomes to lysosomes, decreasing its interaction with the GAP TBC1D5, resulting in RAB7 remaining GTP-bound. This recruits more FYCO1 to lysosomes, promoting anterograde lysosome movement along microtubules via FYCO1. SPG21 knockout cell lines, co-immunoprecipitation (RAB7 binding), TFEB phosphorylation assays, nuclear translocation imaging, lysosome motility assays, proximity/interaction assays for TBC1D5 and FYCO1 The Journal of cell biology High 41400694

Source papers

Stage 0 corpus · 23 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 Hereditary spastic paraplegias with autosomal dominant, recessive, X-linked, or maternal trait of inheritance. Journal of the neurological sciences 229 22554690
2014 Overlapping phenotypes in complex spastic paraplegias SPG11, SPG15, SPG35 and SPG48. Brain : a journal of neurology 132 24833714
2003 Maspardin is mutated in mast syndrome, a complicated form of hereditary spastic paraplegia associated with dementia. American journal of human genetics 128 14564668
2015 ALS5/SPG11/KIAA1840 mutations cause autosomal recessive axonal Charcot-Marie-Tooth disease. Brain : a journal of neurology 84 26556829
2010 A new locus (SPG46) maps to 9p21.2-q21.12 in a Tunisian family with a complicated autosomal recessive hereditary spastic paraplegia with mental impairment and thin corpus callosum. Neurogenetics 38 20593214
2009 Interaction of the SPG21 protein ACP33/maspardin with the aldehyde dehydrogenase ALDH16A1. Neurogenetics 36 19184135
2000 Cloning of ACP33 as a novel intracellular ligand of CD4. The Journal of biological chemistry 33 11113139
2010 Novel SPG11 mutations in Asian kindreds and disruption of spatacsin function in the zebrafish. Neurogenetics 30 20390432
2006 Hereditary spastic paraplegia with thin corpus callosum: reduction of the SPG11 interval and evidence for further genetic heterogeneity. Archives of neurology 27 16682547
2010 Targeted disruption of the Mast syndrome gene SPG21 in mice impairs hind limb function and alters axon branching in cultured cortical neurons. Neurogenetics 23 20661613
2007 Refinement of the SPG15 candidate interval and phenotypic heterogeneity in three large Arab families. Neurogenetics 17 17661097
2005 Complicated hereditary spastic paraplegia with thin corpus callosum (HSP-TCC) and childhood onset. Neuropediatrics 14 16138254
2006 Differential brain transcriptome of beta4 nAChR subunit-deficient mice: is it the effect of the null mutation or the background strain? Physiological genomics 10 16985005
2024 SPG21, a potential oncogene targeted by miR-128-3p, amplifies HBx-induced carcinogenesis and chemoresistance via activation of TRPM7-mediated JNK pathway in hepatocellular carcinoma. Cellular oncology (Dordrecht, Netherlands) 7 38753154
2016 Loss of Maspardin Attenuates the Growth and Maturation of Mouse Cortical Neurons. Neuro-degenerative diseases 6 26978163
2022 Mast Syndrome Outside the Amish Community: SPG21 in Europe. Frontiers in neurology 5 35111129
2024 Identification of new microtubule small-molecule inhibitors and microtubule-associated genes against triple negative breast cancer. American journal of cancer research 3 38726264
2025 Maspardin/SPG21 controls lysosome motility and TFEB phosphorylation through RAB7 positioning. The Journal of cell biology 2 41400694
2025 The hereditary spastic paraplegia type 21 (SPG21) protein is a RAB7A effector that promotes noncanonical mTORC1-catalyzed TFEB phosphorylation and cytoplasmic retention. Molecular biology of the cell 1 40833810
2018 Identification of Carassius auratus gibelio liver cell proteins interacting with the GABAA receptor γ2 subunit using a yeast two-hybrid system. Fish physiology and biochemistry 1 30242696
2010 [Effect of hepatitis B virus X gene on the expression of spastic paraplegia 21]. Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology 1 21205478
2025 Identification of new DNA methylation markers associated with obesity in children. Obesity research & clinical practice 0 40962629
2011 [Study of the effect and mechanism of spastic paraplegia 21 protein on the replication of hepatitis B virus]. Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology 0 22409846

Missed literature

Know a paper Affinage missed for SPG21? Flag it for the maintainers and the community.

No submissions yet.