| 2004 |
ARF (p14/p19) physically interacts with NPM1/B23 through the ARF amino terminus (also required for Mdm2 binding) and the central acidic domain plus oligomerization segment of NPM1. A significant proportion of ARF associates with NPM1 in high-molecular-weight complexes (2–5 MDa), and this interaction is required for ARF to retard rRNA processing; an NPM1 C-terminal deletion mutant that oligomerizes with endogenous NPM1 blocks ARF from entering these complexes and overrides ARF-dependent inhibition of rRNA processing. |
Tandem-affinity purification, co-immunoprecipitation, sucrose gradient sedimentation, dominant-negative NPM mutant expression in NIH 3T3 and MEF cells lacking Mdm2/p53 |
Molecular and cellular biology |
High |
14729947
|
| 2004 |
ARF upregulation causes nucleolar retention (sequestration) of NPM1/B23 and concomitant cell cycle arrest in a p53-independent manner. Mdm2 outcompetes NPM1 for ARF binding: in vitro Mdm2 releases NPM1 from ARF-containing complexes, and in vivo Mdm2 introduction reverses ARF-mediated S-phase block without altering NPM1 protein levels, indicating that ARF's p53-independent tumor suppressor function involves blocking NPM1 nucleocytoplasmic shuttling. |
Inducible ARF expression system, co-immunoprecipitation, cell cycle analysis, in vitro competition assay |
Molecular and cellular biology |
High |
15485902
|
| 1999 |
NPM1/B23 possesses molecular chaperone activity: it inhibits aggregation of denatured substrates (HIV Rev, LADH, carboxypeptidase A, citrate synthase, rhodanese) in a concentration-dependent, saturable manner, protects enzyme activity during thermal denaturation, promotes refolding of guanidine-HCl-denatured LADH, and preferentially binds denatured proteins by exposing hydrophobic regions. |
Turbidity/light-scattering aggregation assay, enzyme activity protection assay, refolding assay, hydrophobic-surface binding |
Protein science |
High |
10211837
|
| 1995 |
NPM1/B23 has intrinsic ribonuclease activity demonstrated with purified recombinant B23.1 and B23.2 isoforms and natural protein, with B23.1 showing ~5-fold higher specific activity than B23.2. Activity is pH-optimum 7.5, stimulated by low Ca2+/Mg2+/NaCl, inhibited by calf thymus DNA, and insensitive to human placental RNase inhibitor, consistent with a role in preribosomal RNA processing. |
RNA-embedded gel assay, perchloric acid precipitation assay with bacterially expressed recombinant proteins |
Nucleic acids research |
High |
7479045
|
| 1996 |
NPM1/B23 interacts with nucleolin (C23) and nucleolar protein p120 through specific binding domains: a ~46-amino-acid domain in B23 (residues 194–239) binds the C-terminal region of C23 (residues 540–628, required for nucleolar localization); the same B23 domain also binds a p120 fragment containing a functional nucleolar localization signal, suggesting NPM1/B23 acts as a nucleolar-localization-signal-binding protein. |
Yeast two-hybrid, co-immunoprecipitation from HeLa nuclear extract, deletion-mutant binding studies |
European journal of biochemistry |
High |
8620867
|
| 2005 |
PARP-1 and PARP-2 both interact with NPM1/B23 through their N-terminal DNA-binding domains. The interaction is constitutive, independent of PARP enzymatic activity or ribosomal transcription, but is abrogated by mutation of the PARP-2 nucleolar localization signal. All three proteins co-delocalize from the nucleolus upon RNA polymerase I inhibition. |
Co-immunoprecipitation, colocalization by immunofluorescence, nucleolar localization signal mutation, RNA Pol I inhibition |
Journal of cell science |
High |
15615785
|
| 2004 |
DNA damage disrupts the ARF–NPM1/B23 interaction in human tumor cells, triggering a transient p53-independent translocation of ARF from the nucleolus to the nucleoplasm, where ARF-Hdm2 complexes appear. This redistribution also unmasks the ARF C-terminus and masks its N-terminus. The pre-damage ARF–NPM1 complexes and localization patterns are restored within 24 hours after DNA repair. |
Immunofluorescence, co-immunoprecipitation, time-course after UV/gamma irradiation in human tumor cells |
Cancer research |
High |
16267006
|
| 2006 |
ROCK II kinase localizes to centrosomes, physically interacts with NPM1/B23, and is an effector downstream of the CDK2/cyclin E–NPM1 pathway in centrosome duplication. ROCK II kinase activity is enhanced by binding to NPM1, and NPM1 acquires higher affinity for ROCK II upon CDK2-mediated Thr199 phosphorylation. Constitutively active ROCK II promotes centrosome duplication; ROCK II knockdown delays it. |
Co-immunoprecipitation, kinase activity assay, siRNA knockdown, constitutively active/dominant-negative constructs, centrosome counting |
Molecular and cellular biology |
High |
17015463
|
| 2004 |
Polo-like kinase 1 (Plk1) phosphorylates NPM1/B23 at Ser4 specifically during mitosis. A kinase-dead Plk1 (K82M) abrogates Ser4 phosphorylation; constitutively active Plk1 (T210D) enhances it; Plk1 RNAi abolishes it. Plk1 and B23 co-immunoprecipitate and interact in GST pull-down. Interference with Ser4 phosphorylation (S4A mutant) causes aberrant centrosome numbers, nuclear elongation/fragmentation, and incomplete cytokinesis. |
In vivo and in vitro kinase assay, Plk1 mutants (kinase-dead, constitutively active), RNAi, co-immunoprecipitation, GST pull-down, phenotypic analysis |
The Journal of biological chemistry |
High |
15190079
|
| 2010 |
Polo-like kinase 2 (Plk2) phosphorylates NPM1/B23 at Ser4 in S-phase. Plk2 and NPM1 interact in vitro in a Polo-box-dependent manner and co-immunoprecipitate in vivo. A non-phosphorylatable S4A mutant of NPM1 interferes with centriole reduplication in S-phase-arrested cells and leads to centriole dilution in cycling cells; the phosphomimetic S4D mutant causes centriole accumulation. |
In vitro kinase assay, Polo-box domain interaction assay, co-immunoprecipitation, S4A/S4D mutant expression, centriole counting |
PloS one |
High |
20352051
|
| 2007 |
NPM1/B23 is sumoylated primarily at Lys263 (and secondarily at Lys230). K263 sumoylation is required for NPM1 centrosomal and nucleolar residency. Rb binds wild-type NPM1 but not the K263R mutant; sumoylation enhances NPM1–Rb interaction, and NPM1 potently stimulates E2F1-mediated transcriptional activity (abolished by K263R). K263R also renders NPM1 vulnerable to caspase-3 cleavage, sensitizing cells to apoptosis. K230R strongly binds phosphatidylinositol-3,4,5-trisphosphate and suppresses DNA fragmentation. |
Sumoylation assay, site-directed mutagenesis, co-immunoprecipitation (Rb), transcriptional reporter assay (E2F1), caspase-3 cleavage assay, PI(3,4,5)P3 binding assay |
Proceedings of the National Academy of Sciences of the United States of America |
High |
17535915
|
| 2021 |
SIRT7 deacetylates NPM1 in response to UV irradiation. ATR-mediated phosphorylation of SIRT7 increases its catalytic activity, promoting NPM1 deacetylation. Deacetylated NPM1 translocates from the nucleolus to the nucleoplasm and binds MDM2, preventing ubiquitination and degradation of p53, thereby enabling cell-cycle arrest and DNA repair. In SIRT7-deficient cells, UV-induced p53 stabilization is abrogated both in vitro and in vivo. |
In vitro deacetylation assay, ATR inhibitor/kinase assay, co-immunoprecipitation (NPM1–MDM2), p53 ubiquitination assay, SIRT7 KO cells and mice, UV-irradiation time-course |
Proceedings of the National Academy of Sciences of the United States of America |
High |
33495326
|
| 2017 |
NPM1 directly associates with the DNA-binding domain of NF-κB p65 and enhances p65 DNA-binding activity through a chaperone-like function, without itself becoming part of the DNA–NF-κB complex. NPM1 knockdown reduces NF-κB-mediated transcription, decreases p65 recruitment to target gene promoters, and impairs inflammatory gene expression (TNF-α, LPS stimulation) and NF-κB-dependent invasion of breast cancer cells. |
Co-immunoprecipitation, ChIP, siRNA knockdown, luciferase reporter assay, invasion assay |
Nucleic acids research |
High |
28003476
|
| 2009 |
NPM1/B23 directly binds p21WAF1/CIP1, confirmed by reciprocal co-immunoprecipitation and GST pull-down. NPM1 overexpression prolongs p21 half-life and inhibits p21 ubiquitination; NPM1 knockdown destabilizes p21 and increases its ubiquitination. Co-localization of NPM1 and p21 in the nucleoplasm increases upon actinomycin D-induced NPM1 translocation. |
Reciprocal co-immunoprecipitation, GST pull-down, confocal microscopy, pulse-chase half-life assay, ubiquitination assay, siRNA knockdown |
Cell cycle |
High |
19221506
|
| 2018 |
Mutant NPM1 (NPM1c) is required to maintain the leukemic state through sustained HOX gene expression. Loss of NPM1c from the cytoplasm—either by nuclear relocalization or targeted degradation—causes immediate downregulation of HOX genes followed by AML cell differentiation. XPO1 inhibition relocalizes NPM1c to the nucleus, promotes differentiation of AML cells, and prolongs survival in Npm1-mutated leukemic mice. |
Targeted protein degradation (dTAG), XPO1 inhibitor treatment, gene expression analysis, differentiation assays, murine leukemia model survival |
Cancer cell |
High |
30205049
|
| 2023 |
NPM1c directly binds to specific chromatin targets co-occupied by the histone methyltransferase KMT2A (MLL1). Targeted degradation of NPM1c leads to rapid decrease in gene expression, loss of RNA Pol II, and loss of activating histone modifications at target loci (including HOXA/B cluster and MEIS1). NPM1c functions as a direct transcriptional regulator in collaboration with the MLL1 complex, providing the mechanism by which MLL1-Menin inhibitors produce clinical responses. |
ChIP-seq, CUT&RUN, targeted NPM1c degradation (dTAG), RNA-seq, co-immunoprecipitation |
Cancer discovery |
High |
36455613
|
| 2023 |
NPM1c binds to a subset of active gene promoters in NPM1c AML cells (including HOXA/B and MEIS1), sustains active transcription by orchestrating a transcription hub, and maintains active chromatin by inhibiting histone deacetylases. This neomorphic chromatin-binding function of NPM1c is absent from wild-type NPM1. |
ChIP-seq, ATAC-seq, RNA-seq, HDAC activity assay, co-immunoprecipitation |
Cancer discovery |
High |
36455589
|
| 2008 |
Npm1 acts as a haploinsufficient tumor suppressor in the hematopoietic compartment. Npm1+/- mice display greater propensity for myeloid and lymphoid malignancies compared with wild-type littermates. Malignant cells retain the wild-type allele with normal NPM1 localization and expression, showing that complete Npm1 loss is not required for tumorigenesis. |
Npm1 heterozygous knockout mouse model, longitudinal tumor surveillance, immunohistochemistry, Western blot |
Blood |
High |
18212245
|
| 1997 |
NPM-ALK fusion protein, generated by t(2;5), is sufficient to cause B-lineage large-cell lymphoma in mice when expressed via retroviral gene transfer into bone marrow. Tumors express NPM-ALK, are clonal with Ig heavy- and kappa-chain rearrangements, and are transplantable into secondary recipients, establishing NPM-ALK as a direct causative oncogene. |
Retroviral gene transfer, bone marrow transplantation, immunoblot, immunohistochemistry, Southern blot for clonality, secondary transplantation |
Blood |
High |
9376569
|
| 2014 |
Aurora kinases A and B phosphorylate NPM1 at Ser125 in vitro and in vivo. Phospho-S125-NPM1 localizes to the midbody during late cytokinesis, co-localizing with Aurora B. Overexpression of a non-phosphorylatable S125A mutant causes deregulated centrosome duplication, elongated/fragmented nuclei, and cytokinesis failure. |
In vitro kinase assay, phospho-specific antibody, immunofluorescence localization, S125A mutant overexpression with mitotic phenotype analysis |
FEBS letters |
High |
24857377
|
| 2007 |
Ebp1 isoforms p42 and p48 form complexes with NPM1/B23 with differential requirements. p48 constitutively binds NPM1 in the nucleolus, requiring NPM1 Lys263 sumoylation. p42 selectively binds unsumoylated NPM1 upon EGF stimulation, requiring Ser360 phosphorylation of p42. The NPM1–Ebp1 complex regulates ribosome biogenesis and cell survival; knockdown of either reduces ribosomal output and viability. |
Co-immunoprecipitation, sumoylation-deficient NPM1 mutants, phospho-mutant p42, siRNA knockdown, ribosome biogenesis assay, viability assay |
The Journal of biological chemistry |
High |
17951246
|
| 2015 |
CD24 competitively inhibits ARF binding to NPM1, resulting in decreased ARF levels, increased MDM2, and decreased p53 and p21/CDKN1A. CD24 silencing prevents functional inactivation of p53 by somatic mutation and viral oncogenes (SV40 large T, HPV16 E6). |
Co-immunoprecipitation competition assay, shRNA/targeted mutation of CD24, Western blot for ARF/MDM2/p53/p21, rescue experiments |
Nature communications |
High |
25600590
|
| 2014 |
AKT phosphorylation of NPM at Ser48 prevents NPM oligomerization, resulting in nucleoplasmic localization of ARF and constitutive MDM2 inhibition, thereby stabilizing p53. Oligomeric NPM drives nucleolar accumulation of ARF; formation of NPM/ARF oligomers antagonizes MDM2 E3-ligase inhibitory complex, activating MDM2 toward p53. AKT/PI3K inhibitors promote ARF nucleolar localization and reduce mutant p53 stability in vivo. |
Co-immunoprecipitation, AKT kinase assay, NPM oligomerization assay, phospho-S48 NPM analysis, xenograft model with AKT inhibitor MK-2206 |
Oncotarget |
Medium |
25071014
|
| 1992 |
NPM1/B23 nucleolar-to-nucleoplasm translocation (B23-translocation) induced by cytotoxic drugs (camptothecin, actinomycin D) is a reversible redistribution process: upon removal of camptothecin, NPM1 relocalizes to nucleoli within 2 h in the presence of cycloheximide, indicating redistribution of existing protein without new synthesis. Phosphorylation status and oligomeric state of NPM1 do not change during drug-induced translocation. |
Drug washout experiments with cycloheximide, immunolocalization, cross-linking/gel electrophoresis for oligomeric state, 32P phosphorylation analysis |
Experimental cell research |
Medium |
1426041
|
| 2024 |
Oligomeric NPM1 recruits histone demethylase KDM5b to the Tsc1 promoter, reducing H3K4me3 modification and inhibiting TSC1 expression, which facilitates mTOR-dependent inflammatory glycolysis in cardiac macrophages and antagonizes their reparative function after myocardial infarction. Macrophage-specific NPM1 deletion shifts metabolism from glycolysis to oxidative phosphorylation. |
Macrophage-specific NPM1 KO mice, ChIP-qPCR, RNA-seq, metabolite profiling, Co-IP (NPM1–KDM5b), H3K4me3 ChIP |
Circulation |
High |
38390737
|
| 2024 |
NPM1 associates with transcription factor IRF1 and sequesters IRF1 from binding to the Nlrc5 and Ciita promoters, suppressing IRF1-mediated transcription of MHC-I and MHC-II molecules in tumor cells, thereby promoting immune evasion. NPM1 loss increases MHC-I/II expression and enhances CD8+ T-cell-mediated killing. |
Co-immunoprecipitation (NPM1–IRF1), dual-luciferase reporter assay, ChIP-qPCR (IRF1 binding at Nlrc5/Ciita), Npm1-KO tumor cells in syngeneic mice, flow cytometry, CyTOF |
Journal of hematology & oncology |
High |
39402629
|
| 2016 |
In ALK-rearranged ALCL cells, only cytoplasmic NPM-ALK is catalytically active; nuclear NPM-ALK is inactive due to heterodimerization with endogenous NPM1. About 50% of NPM-ALK is sequestered as inactive NPM-ALK/NPM1 heterodimers in the nucleus. Overexpression or cytoplasmic relocalization of NPM-ALK (by NPM1 knockout) causes ERK1/2 hyperphosphorylation and apoptosis via ATM/Chk2- and γH2AX-mediated DNA-damage response. |
Nuclear/cytoplasmic fractionation, kinase activity assay, NPM1 siRNA/KO, co-immunoprecipitation, ERK1/2 phosphorylation, γH2AX detection |
Oncogene |
High |
26657151
|
| 2011 |
NPM-ALK regulates phosphorylation of GSK3β at Ser9 via the PI3K/AKT signaling pathway, inhibiting GSK3β activity and thereby stabilizing its substrates Mcl-1 and CDC25A. ALK inhibition leads to GSK3β-dependent proteasomal degradation of Mcl-1 and CDC25A; GSK3β inhibition rescues viability upon ALK inhibition, and GSK3β knockdown confers resistance to ALK inhibitor-induced growth arrest. |
Phosphoproteomic mass spectrometry screen, ALK kinase inhibitor, K210R kinase-dead NPM-ALK mutant, GSK3β siRNA/inhibitor, proteasome inhibitor rescue |
Oncogene |
High |
22179823
|
| 2009 |
NPM-ALK inhibits the p53 tumor suppressor pathway through MDM2 upregulation and JNK-dependent mechanisms. Constitutive ALK signaling leads to functional inactivation/degradation of p53 in JNK- and MDM2-dependent manners, and nuclear exclusion of p53 in a PI3K-dependent manner. Pharmacological inhibition of JNK, PI3K, or MDM2 reactivates p53 and induces apoptosis in ALK-expressing cells. |
ALK kinase inhibition, JNK/PI3K inhibitors, p53 immunofluorescence (nuclear exclusion), MDM2 inhibitor, apoptosis assay |
Blood |
High |
19286999
|
| 2006 |
AUF1/hnRNPD is a binding partner of NPM-ALK (and other X-ALK fusions). AUF1 co-immunoprecipitates with ALK in ALCL cells and in NIH3T3 cells expressing NPM-ALK; both proteins concentrate in cytoplasmic foci requiring ALK kinase activity. AUF1 is phosphorylated by ALK in vitro and is hyperphosphorylated in NPM-ALK-expressing cells, correlating with increased stability of AUF1 target mRNAs encoding proliferation regulators and increased cell survival after transcriptional arrest. |
Co-immunoprecipitation, in vitro kinase assay, immunofluorescence co-localization, mRNA stability assay |
Blood |
Medium |
16835382
|
| 2015 |
NPM1/B23 interaction with linker histone H1.5 supports glioma cell survival. NPM1 depletion sensitizes glioma cells to actinomycin D-induced apoptosis. Silencing of H1.5 triggers glioma cell apoptosis (cleaved caspase-3, cleaved PARP); enforced NPM1 expression suppresses H1.5-depletion-induced apoptosis, demonstrating that NPM1 functions downstream of or alongside H1.5 in an anti-apoptotic pathway. |
siRNA knockdown (NPM1, H1.5), caspase-3 cleavage, PARP cleavage, NPM1 rescue overexpression, actinomycin D treatment |
Scientific reports |
Medium |
26559910
|
| 2010 |
NPM-ALK fusion protein induces HIF1α mRNA expression under normoxia in T-cell lymphoma cells through STAT3, which binds to the HIF1α gene promoter. This was shown by ChIP demonstrating STAT3 occupancy at the HIF1α promoter, STAT3 siRNA abolishing HIF1α expression, and kinase-inactive NPM-ALK K210R failing to induce HIF1α, whereas ALK inhibitor abolishes expression. |
ChIP assay (STAT3 at HIF1α promoter), siRNA (STAT3), kinase-inactive NPM-ALK K210R mutant, ALK small-molecule inhibitor, RT-PCR/Western |
Oncogene |
Medium |
21102525
|
| 2016 |
NPM-ALK phosphorylates WASp at its canonical activation site (Y290) and at a novel residue (Y102). Y102 phosphorylation negatively regulates WASp interaction with Wiskott-Aldrich interacting protein, decreases WASp protein stability, and enhances anchorage-independent growth and tumor growth in vivo. WASp knockdown or Y102F mutation decreases colony formation and xenograft tumor growth. |
Phosphoproteomics, in vitro ALK kinase assay on WASp, co-immunoprecipitation, Y102F/Y290F mutants, xenograft model, colony formation assay |
Oncogene |
High |
27694894
|
| 1997 |
NPM1/B23 undergoes cell cycle-dependent translocation: it is nucleolar at interphase, disperses to the nucleoplasm at prophase, then appears in the cytoplasm from prometaphase to mid-telophase, in the perichromosomal layer (from prometaphase to early telophase, associated with RNA), in cytoplasmic bodies at anaphase/telophase, and in prenucleolar bodies at telophase. Mitotic B23 shows slower SDS-PAGE mobility (consistent with phosphorylation). Cytoplasmic mitotic B23 is RNA-free and Triton-extractable, unlike perichromosomal B23. |
Immunofluorescence in three cell lines, cell extraction with Triton/RNase, Western blot mobility shift, monoclonal antibody 20B2 |
European journal of cell biology |
Medium |
9174672
|