Affinage

MYL12A

Myosin regulatory light chain 12A · UniProt P19105

Round 2 corrected
Length
171 aa
Mass
19.8 kDa
Annotated
2026-04-29
70 papers in source corpus 9 papers cited in narrative 9 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

MYL12A is a non-muscle myosin II regulatory light chain that associates with heavy chains MYH9 and MYH10 and is required for holoenzyme stability, as depletion of MYL12A and its paralogs dramatically reduces heavy-chain and essential-light-chain protein levels and disrupts cell morphology (PMID:21126233). Phosphorylation of MYL12A at Ser19/Thr20 by smooth-muscle MLCK or by the Salmonella effector kinase SteC activates actomyosin contractility, driving processes ranging from cochlear hair cell apical constriction and mechanosensory hair bundle stiffness to macrophage migration during bacterial infection (PMID:33877471, PMID:38528181, PMID:40240732). MYL12A protein stability is regulated by the deubiquitinase OTUD3, which opposes its ubiquitin-dependent degradation, and by the necdin–SGT1–HSP90 chaperone axis, loss of which causes cardiac dysfunction that is rescued by cardiac-specific MYL12A overexpression (PMID:39097608, PMID:38832028). Despite colocalization and shared phosphorylation sites with paralogs MYL12B and MYL9, MYL12A is functionally distinct: it cannot rescue the cell-spreading defect caused by collective MRLC depletion, likely owing to its unique N-terminal sequence (PMID:26663899).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2011 High

    Establishing that RLCs are essential structural subunits of the NM II holoenzyme resolved whether MYL12A functions merely as a regulatory switch or is required for heavy-chain stability itself.

    Evidence Co-IP/MS proteomics and siRNA knockdown in NIH 3T3 fibroblasts showing loss of MYH9, MYH10, and MYL6 upon MYL12A/12B depletion

    PMID:21126233

    Open questions at the time
    • Individual contributions of MYL12A versus MYL12B to holoenzyme stabilization were not separated
    • Mechanism of heavy-chain degradation upon RLC loss (proteasomal vs. autophagic) was not determined
  2. 2015 Medium

    Demonstrating that MYL12A cannot rescue collective MRLC-depletion phenotypes while MYL12B and MYL9 can established isoform-specific functional divergence despite shared phosphosites.

    Evidence siRNA depletion/overexpression rescue of cell spreading in HeLa cells, FRAP turnover analysis, and structural modeling of the unique MYL12A N-terminus

    PMID:26663899

    Open questions at the time
    • The molecular basis for the functional difference (N-terminal orientation model) lacks experimental structural validation
    • Whether MYL12A has unique interactors not shared by MYL12B is unexplored
  3. 2021 Medium

    Identifying smMLCK-dependent phosphorylation of MYL12 in cochlear hair cells linked RLC phosphorylation to a specific mechanosensory tissue, revealing that actomyosin contractility governs hair cell apical geometry.

    Evidence In vitro kinase assay with purified MYL12B, ML-7 pharmacological inhibition with outer hair cell apical area measurement

    PMID:33877471

    Open questions at the time
    • The kinase assay used MYL12B substrate; direct phosphorylation of MYL12A by smMLCK was not separately confirmed
    • Genetic loss-of-function for MYL12A in hair cells was not performed
  4. 2024 High

    Solving the SteC crystal structure and demonstrating direct phosphorylation of MYL12A at Ser19/Thr20 revealed how a bacterial pathogen hijacks host actomyosin contractility to breach the gut-vascular barrier.

    Evidence In vitro kinase assays with phospho-site mapping, SteC crystal structure, macrophage migration/invasion assays, and in vivo Salmonella infection model

    PMID:38528181

    Open questions at the time
    • Whether SteC also phosphorylates MYL12B/MYL9 with equal efficiency in vivo is unresolved
    • Host kinase contributions (e.g. ROCK, MLCK) relative to SteC during infection were not quantified
  5. 2024 High

    Showing that necdin stabilizes MYL12A via the SGT1–HSP90 chaperone axis, with cardiac-specific MYL12A overexpression rescuing heart dysfunction in necdin-knockout mice, placed MYL12A downstream of a Prader-Willi syndrome gene product in cardiac function.

    Evidence Yeast two-hybrid, Co-IP, cardiac-specific overexpression rescue in mice, zebrafish morpholino knockdown

    PMID:38832028

    Open questions at the time
    • Whether MYL12A is the sole mediator of necdin-dependent cardiac function or MYL12B also contributes was not fully resolved
    • The ubiquitin ligase responsible for MYL12A degradation in the absence of necdin/chaperone was not identified
  6. 2024 Medium

    Identification of OTUD3 as a deubiquitinase that directly stabilizes MYL12A connected its post-translational turnover to a cancer-relevant signaling axis in DLBCL.

    Evidence Co-IP, ubiquitination assays, siRNA knockdown, competitive inhibition by Rupatadine in DLBCL models

    PMID:39097608

    Open questions at the time
    • The specific ubiquitin linkage type on MYL12A targeted by OTUD3 was not characterized
    • Whether OTUD3-dependent MYL12A stabilization affects actomyosin contractility or operates through a non-canonical pathway was not tested
    • Findings are from a single laboratory
  7. 2025 Medium

    Localizing NM2A and MYL12A within hair bundles and showing that NM2/MLCK inhibition reduces bundle stiffness and alters mechanotransduction channel gating extended MYL12A's role from apical geometry to the core mechanosensory transduction apparatus.

    Evidence Immunostaining of hair bundles, pharmacological NM2/MLCK inhibition with stiffness and electrophysiological measurements, auditory brainstem responses in mice

    PMID:40240732

    Open questions at the time
    • Genetic ablation of MYL12A specifically in hair cells has not been reported
    • Relative contributions of MYL12A versus MYL12B to bundle stiffness are unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • The E3 ubiquitin ligase(s) targeting MYL12A for proteasomal degradation remain unidentified, and no structural model of MYL12A bound to the NM II heavy-chain lever arm exists to explain its isoform-specific behavior.
  • No high-resolution structure of MYL12A in complex with NM II heavy chain
  • E3 ligase mediating MYL12A ubiquitination is unknown
  • Isoform-specific in vivo phenotypes (MYL12A vs MYL12B knockout) have not been systematically compared

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0008092 cytoskeletal protein binding 2
Localization
GO:0005856 cytoskeleton 5 GO:0005886 plasma membrane 2
Pathway
R-HSA-397014 Muscle contraction 4 R-HSA-162582 Signal Transduction 2 R-HSA-392499 Metabolism of proteins 2
Complex memberships
Non-muscle myosin IIA (NM2A)Non-muscle myosin IIB (NM2B)

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 MYL12A (and paralogs MYL12B and MYL9) are associated with non-muscle myosin heavy chains MYH9 (NMHC IIA) and MYH10 (NMHC IIB), as well as the essential light chain MYL6, in NIH 3T3 fibroblasts. Knockdown of MYL12A/12B causes striking changes in cell morphology and dramatically reduces protein levels of MYH9, MYH10, and MYL6, demonstrating that RLCs are required to maintain the stability of the myosin II holoenzyme and cellular integrity. Proteomic co-immunoprecipitation (Co-IP/MS), siRNA knockdown with western blot and cell morphology analysis in NIH 3T3 fibroblasts The Biochemical journal High 21126233
2024 The Salmonella effector kinase SteC directly recruits host Myl12a and phosphorylates it at Ser19 and Thr20. This phosphorylation drives actin rearrangement and enhanced migration/invasion of CX3CR1+ macrophages, enabling Salmonella to breach the gut-vascular barrier. SteC can use a wide range of NTPs (not only ATP) as phosphate donors for Myl12a phosphorylation, and the crystal structure of SteC reveals an atypical dimerization-mediated catalytic mechanism. In vitro kinase assays, phospho-site mapping (Ser19/Thr20), crystal structure of SteC, macrophage migration/invasion assays, in vivo Salmonella infection model The EMBO journal High 38528181
2024 Necdin, a Prader-Willi syndrome gene product, physically interacts with non-muscle myosin regulatory light chains MYL12A and MYL12B (identified by yeast two-hybrid screening) and stabilizes them via the SGT1-HSP90 chaperone machinery. Loss of necdin reduces MYL12A/B levels and leads to cardiac systolic and diastolic dysfunction in mice; cardiac-specific overexpression of MYL12A rescues heart dysfunction in necdin-deficient mice. Yeast two-hybrid screening, co-immunoprecipitation, cardiac-specific overexpression rescue experiment in mice, zebrafish MYL12.1 morpholino knockdown iScience High 38832028
2024 OTUD3, a deubiquitinase overexpressed in diffuse large B-cell lymphoma (DLBCL), directly deubiquitinates MYL12A, thereby stabilizing it and enhancing DLBCL cell survival. The OTUD3 inhibitor Rupatadine competitively binds OTUD3 and reduces deubiquitination of MYL12A (as well as PD-L1), diminishing pro-survival signaling in DLBCL. Co-immunoprecipitation, ubiquitination assays, siRNA knockdown, competitive binding assay with Rupatadine, in vitro and in vivo DLBCL models Cell death & disease Medium 39097608
2021 In cochlear hair cells, MYL12A and MYL12B (MYL12) are the predominant non-muscle myosin regulatory light chain isoforms expressed at the apical surface. Smooth muscle MLCK (smMLCK) phosphorylates purified MYL12B in vitro, and isolated hair cells contain phosphorylated MYL12. Inhibition of smMLCK with ML-7 reduces MYL12 phosphorylation and causes expansion of the outer hair cell apical area, demonstrating that MYL12 phosphorylation by smMLCK drives apical constriction-like shape changes in hair cells. Droplet digital PCR (expression), immunofluorescence, in vitro kinase assay (smMLCK + purified MYL12B), pharmacological inhibition (ML-7) with cell area measurement Journal of the Association for Research in Otolaryngology : JARO Medium 33877471
2025 Non-muscle myosin IIA (NM2A) and MYL12A are expressed in hair bundles of inner ear hair cells (confirmed by immunostaining). Inhibition of NM2 or MLCK reduces hair bundle stiffness, suppresses spontaneous oscillation, and increases the resting open probability of mechanoelectrical transduction channels in bullfrog saccular hair cells; MLCK inhibition also elevates hearing thresholds in mice, placing MYL12A phosphorylation downstream of MLCK in the regulation of hair cell mechanosensory physiology. Immunostaining (localization), NM2/MLCK pharmacological inhibitors with hair bundle stiffness measurement, electrophysiology (channel open probability), auditory brainstem response in mice Journal of the Association for Research in Otolaryngology : JARO Medium 40240732
2015 In HeLa cells, MYL12A (MRLC1), MYL12B (MRLC2), and MYL9 (MRLC3) are all phosphorylated at Thr18/Ser19 and colocalize with each other. Depletion of all three MRLCs perturbs cell spreading, but overproduction of MYL12B (MRLC2) or MYL9 (MRLC3)—but not MYL12A (MRLC1)—rescues the cell-spreading defect, indicating that MYL12A has overlapping but functionally distinct properties from the other isoforms. Structural modeling suggests that the unique N-terminal sequence of MYL12A/MRLC1 places it in a different orientation relative to myosin II. siRNA knockdown, overexpression rescue assay, FRAP (turnover rate), immunofluorescence colocalization, 3D structural modeling Cytoskeleton (Hoboken, N.J.) Medium 26663899
2012 In Jurkat T-cell leukemia cells, MYL12A mRNA (but not MYL9) is expressed. Transfection of MYL9 into Jurkat cells (creating Jurkat-I) significantly increases surface CD3 expression, demonstrating a MYL9-dependent pathway for CD3 surface trafficking. PMA treatment increases surface CD3 in Jurkat wild-type cells (which express MYL12A/12B but not MYL9) via a protein kinase C-dependent, MYL9-independent pathway, indicating that MYL12A participates in a PKC-dependent route for surface CD3 expression. Gene transfection (MYL9 into Jurkat cells), flow cytometry (surface CD3 levels), PMA pharmacological treatment, RT-PCR (isoform expression) Journal of smooth muscle research Low 23538510
2025 Knockdown of MRCL3 (MYL12A) by siRNA in BxPC3 pancreatic cancer cells significantly inhibits cell proliferation and increases apoptosis (Sub-G1 population by ~10%). MRCL3 knockdown increases c-Jun expression while blocking c-Fos expression, indicating that MYL12A regulates cell survival through AP-1 transcription factor signaling. siRNA knockdown, cell proliferation assay, flow cytometry (Sub-G1/apoptosis), western blot (c-Fos, c-Jun) Acta scientific microbiology Low 41938721

Source papers

Stage 0 corpus · 70 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America 1479 12477932
2015 A human interactome in three quantitative dimensions organized by stoichiometries and abundances. Cell 1015 26496610
2004 A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway. Nature cell biology 841 14743216
2018 VIRMA mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell discovery 829 29507755
2007 Large-scale mapping of human protein-protein interactions by mass spectrometry. Molecular systems biology 733 17353931
2021 Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell 705 33961781
2012 A census of human soluble protein complexes. Cell 689 22939629
2011 Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in bioinformatics 656 21873635
1994 Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. Gene 492 8125298
2004 The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome research 438 15489334
2022 OpenCell: Endogenous tagging for the cartography of human cellular organization. Science (New York, N.Y.) 432 35271311
2012 A high-throughput approach for measuring temporal changes in the interactome. Nature methods 273 22863883
2002 Proteomic analysis of a detergent-resistant membrane skeleton from neutrophil plasma membranes. The Journal of biological chemistry 249 12202484
2010 MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis. Immunology and cell biology 221 20458337
2015 ∆F508 CFTR interactome remodelling promotes rescue of cystic fibrosis. Nature 209 26618866
2018 An AP-MS- and BioID-compatible MAC-tag enables comprehensive mapping of protein interactions and subcellular localizations. Nature communications 201 29568061
2017 Energy stress-induced lncRNA FILNC1 represses c-Myc-mediated energy metabolism and inhibits renal tumor development. Nature communications 178 28978906
2016 SPATA2 Links CYLD to LUBAC, Activates CYLD, and Controls LUBAC Signaling. Molecular cell 134 27591049
2013 Proteomic analysis of podocyte exosome-enriched fraction from normal human urine. Journal of proteomics 126 23376485
2022 Human transcription factor protein interaction networks. Nature communications 123 35140242
2016 SPATA2-Mediated Binding of CYLD to HOIP Enables CYLD Recruitment to Signaling Complexes. Cell reports 115 27545878
2021 Protein interaction landscapes revealed by advanced in vivo cross-linking-mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America 113 34349018
2015 KAP1 Recruitment of the 7SK snRNP Complex to Promoters Enables Transcription Elongation by RNA Polymerase II. Molecular cell 113 26725010
2021 FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2. Molecular cancer 106 33658012
2011 Myosin regulatory light chains are required to maintain the stability of myosin II and cellular integrity. The Biochemical journal 104 21126233
2005 Application of fluorescence difference gel electrophoresis saturation labelling for the analysis of microdissected precursor lesions of pancreatic ductal adenocarcinoma. Proteomics 104 15924292
2020 The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation. Nature communications 101 33239621
2002 Molecular cloning and characterization of an ML-236B (compactin) biosynthetic gene cluster in Penicillium citrinum. Molecular genetics and genomics : MGG 100 12172803
2013 A Y2H-seq approach defines the human protein methyltransferase interactome. Nature methods 93 23455924
2012 Charting the landscape of tandem BRCT domain-mediated protein interactions. Science signaling 92 22990118
2017 Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair. Nature communications 89 29229926
2021 TRIM26 Induces Ferroptosis to Inhibit Hepatic Stellate Cell Activation and Mitigate Liver Fibrosis Through Mediating SLC7A11 Ubiquitination. Frontiers in cell and developmental biology 87 33869196
2021 SARS-CoV-2-host proteome interactions for antiviral drug discovery. Molecular systems biology 86 34709727
2012 AATF/Che-1 acts as a phosphorylation-dependent molecular modulator to repress p53-driven apoptosis. The EMBO journal 51 22909821
2020 The Progression of Acute Myeloid Leukemia from First Diagnosis to Chemoresistant Relapse: A Comparison of Proteomic and Phosphoproteomic Profiles. Cancers 40 32512867
2016 Fine-mapping, novel loci identification, and SNP association transferability in a genome-wide association study of QRS duration in African Americans. Human molecular genetics 30 27577874
2021 Modeling multi-species RNA modification through multi-task curriculum learning. Nucleic acids research 27 33744973
2006 Thirteen is enough: the myosins of Dictyostelium discoideum and their light chains. BMC genomics 27 16857047
2015 The Plasmodium Class XIV Myosin, MyoB, Has a Distinct Subcellular Location in Invasive and Motile Stages of the Malaria Parasite and an Unusual Light Chain. The Journal of biological chemistry 26 25802338
2018 Integrated analysis of lncRNA-mRNA co-expression networks in the α-particle induced carcinogenesis of human branchial epithelial cells. International journal of radiation biology 23 30395764
2005 Genomic structure and organization of the high grade Myopia-2 locus (MYP2) critical region: mutation screening of 9 positional candidate genes. Molecular vision 21 15723005
2004 Dissecting the genetics of human high myopia: a molecular biologic approach. Transactions of the American Ophthalmological Society 21 15747770
2024 Salmonella manipulates macrophage migration via SteC-mediated myosin light chain activation to penetrate the gut-vascular barrier. The EMBO journal 18 38528181
2021 Novel partners of USP6 gene in a spectrum of bone and soft tissue lesions. Virchows Archiv : an international journal of pathology 18 33558945
2012 Putting the brakes on p53-driven apoptosis. Cell cycle (Georgetown, Tex.) 17 22983126
2006 Identification and characterization of an 8-kDa light chain associated with Dictyostelium discoideum MyoB, a class I myosin. The Journal of biological chemistry 17 16415352
2020 Ligand Binding to the Collagen VI Receptor Triggers a Talin-to-RhoA Switch that Regulates Receptor Endocytosis. Developmental cell 16 32428455
2022 Global Proteomic Analyses Reveals Abnormal Immune Regulation in Patients With New Onset Ankylosing Spondylitis. Frontiers in immunology 15 35371008
2018 Identification and expression of carbonic anhydrase 2, myosin regulatory light chain 2 and selenium-binding protein 1 in zebrafish Danio rerio: Implication for age-related biomarkers. Gene expression patterns : GEP 11 29738878
2015 Identification of phosphorylated MYL12B as a potential plasma biomarker for septic acute kidney injury using a quantitative proteomic approach. International journal of clinical and experimental pathology 11 26823757
2011 Identification of calmodulin and MlcC as light chains for Dictyostelium myosin-I isozymes. Biochemistry 11 21671662
2024 Rupatadine-inhibited OTUD3 promotes DLBCL progression and immune evasion through deubiquitinating MYL12A and PD-L1. Cell death & disease 9 39097608
2020 The Cardiac Syndecan-2 Interactome. Frontiers in cell and developmental biology 7 32984315
2023 Screening core genes and signaling pathways after SFTSV infection by integrated transcriptome profiling analysis. Virus research 6 37211158
2021 Phosphorylation of MYL12 by Myosin Light Chain Kinase Regulates Cellular Shape Changes in Cochlear Hair Cells. Journal of the Association for Research in Otolaryngology : JARO 6 33877471
2016 Common and differentially expressed long noncoding RNAs for the characterization of high and low grade bladder cancer. Gene 6 27451077
2014 [Overexpression of LaeA enhances mevastatin production and reduces sporulation of Penicillium citrinum]. Wei sheng wu xue bao = Acta microbiologica Sinica 6 25876329
2012 Surface CD3 expression proceeds through both myosin regulatory light chain 9 (MYL9)-dependent and MYL9-independent pathways in Jurkat cells. Journal of smooth muscle research = Nihon Heikatsukin Gakkai kikanshi 6 23538510
2015 Characterization of myosin II regulatory light chain isoforms in HeLa cells. Cytoskeleton (Hoboken, N.J.) 5 26663899
2022 To detect potential pathways and target genes in infantile Pompe patients using computational analysis. BioImpacts : BI 4 35411297
2021 Characterizing RNA Pseudouridylation by Convolutional Neural Networks. Genomics, proteomics & bioinformatics 4 33631424
2020 Proteomics reveals region-specific hemostatic alterations in response to mechanical ventilation in a preterm lamb model of lung injury. Thrombosis research 4 33075590
2014 Structure of the small Dictyostelium discoideum myosin light chain MlcB provides insights into MyoB IQ motif recognition. The Journal of biological chemistry 4 24790102
2024 Deficiency in Prader-Willi syndrome gene necdin leads to attenuated cardiac contractility. iScience 3 38832028
2022 Identification and genetic analysis of rare variants in myosin family genes in 412 Han Chinese congenital heart disease patients. Molecular genetics & genomic medicine 2 35993536
2024 Whole Genome Linkage and Association Analyses Identify DLG Associated Protein-1 as a Novel Positional and Biological Candidate Gene for Muscle Strength: The Long Life Family Study. The journals of gerontology. Series A, Biological sciences and medical sciences 1 38808484
2022 Analysis of Plasmodium falciparum myosin B ATPase activity and structure in complex with the calmodulin-like domain of its light chain MLC-B. The Journal of biological chemistry 1 36273584
2025 Influence of Myosin Regulatory Light Chain and Myosin Light Chain Kinase on the Physiological Function of Inner Ear Hair Cells. Journal of the Association for Research in Otolaryngology : JARO 0 40240732
2025 Analysis of the transcriptional mechanisms of yellowfin tuna (Thunnus albacares) juveniles in response to acute cold stress in brain and muscle tissues. Comparative biochemistry and physiology. Part A, Molecular & integrative physiology 0 41412545
2025 Myosin Regulatory Light Chain Silencing: Function, Mechanisms, and Therapeutic Implications in Pancreatic Cancer. Acta scientific microbiology 0 41938721