| 2003 |
ArfGAP1-catalyzed GTP hydrolysis in Arf1 and COPI coat disassembly are stimulated over two orders of magnitude as membrane bilayer curvature increases toward that of a transport vesicle, establishing a mechanistic coupling between lipid packing/curvature and the timing of GTP hydrolysis during COPI vesicle budding. |
Time-resolved in vitro GTP hydrolysis and COPI disassembly assays on liposomes of controlled size |
Nature |
High |
14654841
|
| 2005 |
A central ~40-amino-acid ALPS (ArfGAP1 Lipid Packing Sensor) motif in ArfGAP1 is unstructured in solution but folds into an amphipathic helix upon inserting bulky hydrophobic residues between loosely packed lipids on highly curved membranes, and this motif is necessary for coupling ArfGAP1 GAP activity to membrane curvature. |
Site-directed mutagenesis, limited proteolysis, circular dichroism, liposome-binding assays |
The EMBO journal |
High |
15944734
|
| 2002 |
ARFGAP1 promotes COPI vesicle formation and cargo sorting by functioning as a stoichiometric component of the COPI coat; it binds directly to dilysine motifs of cargo proteins, and its presence at levels comparable to coatomer on reconstituted vesicles supports a coat function rather than purely an uncoating function. |
Reconstituted COPI vesicle formation from Golgi membranes with purified components; direct binding assays between GAP and dilysine cargo motifs |
The Journal of cell biology |
High |
12379802
|
| 2001 |
The cytoplasmic domain of p24β1 cargo protein binds directly to ArfGAP1 and inhibits ArfGAP1-mediated GTP hydrolysis on Arf1 bound to liposomes and Golgi membranes, providing a mechanism whereby cargo suppresses GAP activity during vesicle formation. |
Synthetic peptide binding assays; in vitro GTP hydrolysis assays on liposomes and Golgi membranes |
The Journal of cell biology |
High |
11748249
|
| 2005 |
ArfGAP1 catalytic activity is required for COPI vesicle formation from Golgi membranes, and ARF1 (not ARFGAP1) plays a key direct role in binding SNARE cargo proteins; ArfGAP1 promotes coatomer binding to cargo proteins. |
In vitro COPI vesicle reconstitution from Golgi membranes; cargo-binding assays with purified components |
The Journal of cell biology |
High |
15657398
|
| 2005 |
FRAP analysis in living cells shows that ArfGAP1 undergoes fast cytosol/Golgi exchange, with ~40% of exchange dependent on engagement with coatomer and Arf1; permanent Arf1 activation traps ArfGAP1 on Golgi in a coatomer-dependent manner, demonstrating interdependent roles in the COPI coat assembly-disassembly cycle in vivo. |
FRAP of GFP-tagged ArfGAP1, Arf1, and coatomer in living cells; pharmacological Arf1 activation |
The Journal of cell biology |
High |
15795316
|
| 2007 |
ArfGAP1 contains a second lipid-packing sensor motif (ALPS2) that also forms an amphipathic helix at the surface of small vesicles; ALPS2 reinforces membrane interaction ~40-fold relative to ALPS1 alone and contributes to Golgi localization of ArfGAP1 in vivo. |
Quantitative liposome-binding assays; circular dichroism; GFP localization in cells; mutagenesis |
Biochemistry |
High |
17253781
|
| 2005 |
Golgi localization of ArfGAP1 depends on hydrophobic residues (including Leu-207 and Trp-211) within a short stretch (residues 204–214); alanine substitution of these residues strongly diminishes Golgi localization and reduces in vitro GAP activity on Golgi-bound Arf1. |
Site-directed mutagenesis; GFP-fusion localization; in vitro GAP activity assay on Golgi membranes |
The Journal of biological chemistry |
High |
16316994
|
| 2008 |
Unlike ArfGAP2 and ArfGAP3 (which require coatomer for membrane recruitment), ArfGAP1 binds membranes directly in a curvature-dependent manner, demonstrating that ArfGAP1 is a membrane curvature-dependent ArfGAP with a distinct recruitment mechanism from the coatomer-dependent ArfGAPs. |
Membrane-binding assays with purified proteins; in vitro GAP activity assays in the presence/absence of coatomer |
The Journal of cell biology |
High |
19015319
|
| 2008 |
Catalytic amounts of ArfGAP1 significantly reduce the yield of purified COPI vesicles in a defined reconstitution assay, suggesting ArfGAP1 acts as an uncoating factor rather than a stoichiometric coat component under these conditions; Arf1 (not ArfGAP1) constitutes a stoichiometric component of the COPI coat. |
Defined reconstitution assay for COPI vesicle formation from Golgi membranes with titrated ArfGAP1; COPI vesicle purification and quantification |
Traffic |
Medium |
19055691
|
| 2009 |
ArfGAP1 ALPS motifs bind exclusively to membrane tubes (positively curved membranes, radius threshold ~35 nm) and not to flat giant vesicle membranes; mixing catalytic amounts of ArfGAP1 with Arf1-GTP on tube-connected vesicles generates a smooth Arf1 gradient along the tube, demonstrating spatial regulation of Arf1 activity by membrane curvature sensing. |
Membrane tube pulling from giant vesicles using molecular motors and optical tweezers; fluorescence microscopy of labeled proteins |
The EMBO journal |
High |
19927117
|
| 2005 |
ArfGAP1-induced GTP hydrolysis disassembles AP-1 adaptor oligomers from membranes; AP-1 stimulates ArfGAP1 activity in a reciprocal interaction, suggesting a role for AP-1 in regulating the Arf1 GTPase timer. |
In vitro reconstitution with purified AP-1, Arf1, liposomes, and ArfGAP1; gel filtration/sedimentation to detect oligomers |
Molecular biology of the cell |
Medium |
16093346
|
| 2010 |
ArfGAP1 interacts with coat proteins through tryptophan-based motifs in its C-terminal region: a (329)WETF sequence binds clathrin adaptors AP-1 and AP-2, while the extreme C-terminal motif (405)AADEGWDNQNW is required for coatomer binding via the δ-subunit of the coatomer adaptor-like subcomplex. |
GST pulldown with peptides; mutagenesis; peptide competition; reporter fusion assay in vivo |
Biochemical and biophysical research communications |
Medium |
20211604
|
| 2011 |
Distinct regions of ARFGAP1 separately interact with AP-2 and coatomer; selectively disrupting the ARFGAP1–AP-2 interaction inhibits AP-2-dependent endocytosis, while disrupting ARFGAP1–coatomer interaction inhibits COPI transport, showing ARFGAP1 participates in both pathways through independent coat-binding regions. |
Co-immunoprecipitation; dominant-negative and deletion mutant analysis; transport assays |
Nature cell biology |
High |
21499258
|
| 2008 |
ARFGAP1 binds directly to the C-terminus of GAT-1 (GABA transporter-1), and surface expression of a COPII-independent GAT-1 mutant (GAT1-RL/AS) requires ARFGAP1; correct axonal targeting of GAT-1 requires COPII-dependent ER export and is lost for the ARFGAP1-dependent bypass mutant. |
Co-immunoprecipitation/pull-down; siRNA knockdown; immunofluorescence in neuronal cells |
The Journal of neuroscience |
Medium |
19020038
|
| 2012 |
ArfGAP1 acts as a GTPase-activating protein for LRRK2, markedly enhancing LRRK2 GTP hydrolysis activity; ArfGAP1 also promotes LRRK2 kinase activity; reciprocally, LRRK2 directly phosphorylates ArfGAP1 in vitro; silencing ArfGAP1 rescues G2019S LRRK2-induced neurite shortening in primary cortical neurons. |
Co-immunoprecipitation in mammalian cells and brain lysates; in vitro GTPase assay; in vitro kinase assay; siRNA knockdown with neurite morphology readout |
PLoS genetics |
High |
22363216
|
| 2012 |
ArfGAP1 is the first identified GAP for LRRK2, binding predominantly via the WD40 and kinase domains of LRRK2; ArfGAP1 increases LRRK2 GTPase activity and regulates LRRK2 toxicity in vitro and in Drosophila; LRRK2 inhibits ArfGAP1 GAP activity while ArfGAP1 reduces LRRK2 autophosphorylation and kinase activity; Δ64-ArfGAP1 (dominant-negative) and shRNA knockdown of ArfGAP1 reduce LRRK2 toxicity. |
In vitro GTPase assay; in vitro kinase assay; co-immunoprecipitation; dominant-negative expression; Drosophila in vivo toxicity assay; shRNA knockdown |
The Journal of neuroscience |
High |
22423108
|
| 2011 |
ArfGAP1 promotes COPI vesicle formation by facilitating coatomer polymerization: ArfGAP1 increases coatomer-induced LUV deformation and, with cargo peptides, supports self-assembly of coatomer into spherical structures in the absence of membranes; ArfGAP1 overexpression in vivo induces vesicle accumulation while allowing normal COPI cargo trafficking. |
Electron microscopy of LUV deformation; coatomer self-assembly assay; in vivo overexpression with trafficking assay |
Cellular logistics |
Medium |
22279613
|
| 2011 |
The non-catalytic C-terminal domain of ARFGAP1 (residues sufficient in GAP273 truncation) regulates actin cytoskeleton reorganization by inhibiting Rac1 activation upstream of Rac1; overexpression of constitutively active Rac1 or ARF6 suppresses the actin/spreading defects caused by this domain. |
Overexpression of truncation mutants; live-cell imaging; Rac1 activation assays; epistasis with constitutively active GTPases |
PloS one |
Medium |
21483700
|
| 2014 |
HCV NS5A interacts with ARFGAP1 via a conserved cluster of positively charged amino acids in NS5A; this interaction hijacks ARFGAP1 to remove the PI4P phosphatase Sac1 (a COPI cargo) from the HCV replication site, thereby maintaining high PI4P levels required for HCV RNA replication. |
Co-immunoprecipitation; mutational analysis of NS5A; siRNA knockdown of ARFGAP1; PI4P level measurement; HCV replication assay |
Journal of virology |
Medium |
24623438
|
| 2014 |
ARFGAP1 associates transiently with lipid droplets upon oleate addition in hepatocytes; cAMP addition shifts ARFGAP1 from lipid droplets to the Golgi; overexpression and knockdown of ARFGAP1 affect lipid droplet formation. |
Fluorescence microscopy; subcellular fractionation; overexpression and siRNA knockdown with lipid droplet quantification |
PloS one |
Medium |
25397679
|
| 2021 |
ArfGAP1 interacts with mTORC1 in the absence of amino acids and inhibits mTORC1 lysosomal localization and activation; the ALPS motifs of ArfGAP1 are required for this interaction and regulation of mTORC1 activity. |
Co-immunoprecipitation; lysosomal fractionation; mTORC1 activity assays; ALPS motif mutants; amino acid stimulation/deprivation |
The EMBO journal |
Medium |
33988249
|
| 2021 |
ArfGAP1 directly interacts with GTP-bound Arl1 and exhibits GAP activity toward Arl1 in vitro; ArfGAP1 overexpression (but not GAP activity-deficient mutant) causes dissociation of Arl1 from the TGN; ArfGAP1 knockdown impairs endosome-to-TGN retrograde transport of Shiga toxin B-subunit, similar to constitutively active Arl1. |
In vitro GTPase assay; activity pull-down; GFP-Arl1 localization; Shiga toxin trafficking assay; siRNA knockdown |
FASEB journal |
Medium |
33715220
|
| 2021 |
ARFGAP1 promotes constitutive endocytosis of the glutamate transporter EAAT3 via its GAP activity using ARF6 as the substrate; a single phenylalanine residue (F508) in the EAAT3 C-terminus is required for ARFGAP1-promoted AP-2-dependent endocytosis; ARFGAP1 was identified as an EAAT3-interacting protein by mass spectrometry. |
Mass spectrometry; co-immunoprecipitation; GAP activity-deficient mutants; endocytosis assays; mutagenesis of F508 |
Frontiers in physiology |
Medium |
34040545
|
| 2017 |
ArfGAP1 controls actin cytoskeleton reorganization downstream of Arf1 and phospholipase D1 (PLD1) via the M3 muscarinic receptor pathway, restricting Mycobacterium tuberculosis entry into epithelial cells; ArfGAP1 silencing leads to uncontrolled actin reorganization and increased Mtb uptake, while infection by Shigella flexneri and Yersinia pseudotuberculosis is unaffected. |
siRNA knockdown; actin imaging; bacterial entry assays with multiple pathogens; genetic pathway analysis |
EMBO reports |
Medium |
29141986
|
| 2014 |
Phosphatidic acid generated by phospholipase D2 (PLD2) is required for ArfGAP1 recruitment to Golgi membranes; inhibition or depletion of PLD2 prevents ArfGAP1 Golgi localization. |
PLD2 inhibition and siRNA depletion; fluorescence microscopy of ArfGAP1 localization |
PloS one |
Medium |
25354038
|
| 2026 |
LRRK2 phosphorylates ArfGAP1 within its ALPS2 motif at residues Ser284, Thr291, and Thr292 in vitro; phospho-mimicking mutations at these sites impair ArfGAP1 Golgi localization, redirect it to the cytoplasm, increase its interaction with mitochondrial VDAC proteins, block Golgi-derived vesicle formation after ER stress, and impair neurite outgrowth inhibition; phospho-null mutations protect against G2019S LRRK2 neurotoxicity. |
In vitro kinase assay with site-directed mutagenesis; phospho-null and phospho-mimetic mutant analysis; subcellular localization; interactome analysis; primary neuron morphology assay |
Frontiers in molecular neuroscience |
Medium |
42094986
|
| 2023 |
In Drosophila border cells, ArfGAP1 is required to maintain receptor tyrosine kinases (guidance receptors) at the plasma membrane; loss of ArfGAP1 increases receptor levels in late endosomes, increases late endosome/lysosome number and size, reduces directional chemotaxis, and genetic interactions suggest ArfGAP1 acts on Lrrk to regulate receptor sorting. |
Drosophila genetics; fluorescence imaging of receptor localization; endosome/lysosome quantification; genetic interaction analysis |
iScience |
Medium |
37599820
|
| 2025 |
ATG2A localizes to extra-Golgi ARFGAP1-positive puncta during autophagosome biogenesis; ARFGAP1 itself is dispensable for macroautophagy but marks membranes that associate with the autophagic machinery; when autophagosome formation or early secretory pathway is perturbed, ARFGAP1 and Rab1a accumulate at ectopic sites with autophagic components. |
Proximity labeling (BioID); fluorescence microscopy; siRNA depletion; co-immunoprecipitation |
bioRxivpreprint |
Low |
40196537
|