Affinage

ANAPC16

Anaphase-promoting complex subunit 16 · UniProt Q96DE5

Length
110 aa
Mass
11.7 kDa
Annotated
2026-06-09
7 papers in source corpus 3 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ANAPC16 (APC16) is a metazoan-specific subunit of the APC/C E3 ubiquitin ligase that contributes to the ubiquitination of cell-cycle substrates required for mitotic and meiotic progression (PMID:20392738, PMID:21775471). It is a bona fide component of the human APC/C present throughout the cell cycle, and its depletion reduces APC/C ubiquitin ligase activity toward mitotic substrates, phenocopying loss of other APC/C subunits (PMID:20392738). Structurally, APC16 resides in the Arc Lamp subcomplex together with CDC26, APC13, and the TPR proteins APC7, APC3, APC6, and APC8, where a single APC16 molecule binds asymmetrically to the symmetric APC3 homodimer and bridges APC3 to APC7, recruiting APC7 into the assembly (PMID:25490258). APC16 is conserved across metazoans but absent in fungi, with functional equivalents identified in C. elegans (emb-1/K10D2.4) and zebrafish (PMID:20392738); in C. elegans, loss of emb-1 arrests one-cell embryos in metaphase of meiosis I and is genetically suppressed and enhanced by known APC/C regulators, and it is additionally required for mitotic germline proliferation, placing APC16 firmly within the APC/C pathway for both meiotic and mitotic cell division (PMID:21775471).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2010 High

    Established that APC16 is a genuine, constitutive subunit of the human APC/C rather than a transient interactor, and that it is functionally required for APC/C ligase activity.

    Evidence Tandem-affinity purification, reciprocal co-IP, and siRNA knockdown coupled to APC/C activity assays in human cells

    PMID:20392738

    Open questions at the time
    • Did not resolve where APC16 sits structurally within the complex
    • Mechanism by which depletion lowers ligase activity not defined
  2. 2010 Medium

    Defined APC16 as a metazoan-specific APC/C subunit by showing functional equivalence of C. elegans and zebrafish orthologs, distinguishing it from fungal APC/C architecture.

    Evidence Sequence homology analysis with depletion/complementation in C. elegans and zebrafish (single lab)

    PMID:20392738

    Open questions at the time
    • Functional equivalence based on depletion phenotype only
    • No biochemical demonstration that orthologs occupy the same APC/C position
  3. 2011 High

    Placed APC16/EMB-1 within the APC/C pathway controlling meiotic progression, answering whether its loss specifically disrupts cell-division control.

    Evidence Genetic epistasis with temperature-sensitive mutants, double-mutant analysis, and suppressor/enhancer screens in C. elegans

    PMID:21775471

    Open questions at the time
    • Does not identify the molecular step in meiosis I that APC16 enables
    • Substrate(s) whose ubiquitination requires APC16 not defined
  4. 2011 Medium

    Extended APC16's role beyond meiosis by showing a requirement in mitotic germline proliferation, consistent with a general APC/C function.

    Evidence Loss-of-function genetic analysis in C. elegans germline (single lab)

    PMID:21775471

    Open questions at the time
    • Mitotic phenotype characterized at cellular but not molecular level
    • Relationship between meiotic and mitotic requirements not dissected
  5. 2014 High

    Provided the structural basis for APC16 function, showing how it physically assembles part of the APC/C by bridging APC3 to APC7.

    Evidence X-ray crystallography of APC3Δloop alone and bound to the APC16 C-terminal domain, with biochemical mapping and mutagenesis

    PMID:25490258

    Open questions at the time
    • Structural work used isolated APC3-APC16 module, not the holo-APC/C
    • Functional consequence of disrupting the asymmetric APC3-APC16 interface not tested in cells

Open questions

Synthesis pass · forward-looking unresolved questions
  • How APC16-mediated APC7 recruitment quantitatively shapes APC/C substrate selectivity and activity in vivo remains unresolved.
  • No defined set of substrates dependent specifically on the APC16-APC7 module
  • Regulation of APC16 across cell-cycle phases not characterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2
Pathway
R-HSA-1640170 Cell Cycle 3 R-HSA-392499 Metabolism of proteins 1
Partners
Complex memberships
APC/CArc Lamp subcomplex

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 Crystal structures of APC3Δloop alone and in complex with the C-terminal domain of APC16 revealed that one APC16 molecule binds asymmetrically to the symmetric APC3 homodimer, establishing the structural basis for APC3-APC16 interaction and showing how APC16 recruits APC7 to APC3 within the APC/C Arc Lamp subcomplex. X-ray crystallography, biochemical mapping, mutagenesis Journal of molecular biology High 25490258
2014 APC16 is located in the Arc Lamp subcomplex of the APC/C together with CDC26, APC13, and TPR proteins (APC7, APC3, APC6, APC8), where it mediates assembly by bridging APC3 and APC7. Structural analysis (crystallography) and biochemical fractionation Journal of molecular biology High 25490258
2010 APC16 is a bona fide subunit of the human APC/C, present in APC/C complexes throughout the cell cycle; depletion of APC16 reduces APC/C ubiquitin ligase activity toward mitotic substrates and phenocopies depletion of other APC/C subunits. Tandem-affinity purification, co-immunoprecipitation, siRNA knockdown with APC/C activity assays Journal of cell science High 20392738
2010 APC16 is conserved in metazoans but not fungi; C. elegans K10D2.4 and zebrafish zgc:110659 are functional equivalents of human APC16, establishing its role as a metazoan-specific APC/C subunit. Sequence homology analysis combined with functional complementation/depletion experiments in C. elegans and zebrafish Journal of cell science Medium 20392738
2011 C. elegans emb-1 encodes the APC16 homolog K10D2.4; emb-1 loss-of-function arrests one-cell embryos in metaphase of meiosis I, and the phenotype is enhanced in double mutants with other APC/C subunits and suppressed by known APC/C suppressors, placing APC16/EMB-1 within the APC/C pathway for meiotic progression. Genetic epistasis (double mutant analysis), temperature-sensitive mutants, genetic suppressor/enhancer screens Genetics High 21775471
2011 In addition to its meiotic role, C. elegans APC16 (EMB-1) is required for mitotic proliferation of the germline, indicating a mitotic function consistent with its role as an APC/C subunit. Loss-of-function genetic analysis in C. elegans Genetics Medium 21775471

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Structure of an APC3-APC16 complex: insights into assembly of the anaphase-promoting complex/cyclosome. Journal of molecular biology 31 25490258
2010 APC16 is a conserved subunit of the anaphase-promoting complex/cyclosome. Journal of cell science 26 20392738
2020 Alkyl-carbon chain length of two distinct compounds and derivatives are key determinants of their anti-Acanthamoeba activities. Scientific reports 13 32286337
2011 emb-1 encodes the APC16 subunit of the Caenorhabditis elegans anaphase-promoting complex. Genetics 13 21775471
2020 Drug combinations as effective anti-leishmanials against drug resistant Leishmania mexicana. RSC medicinal chemistry 9 33479685
2025 A genome-wide scan of non-coding RNAs and enhancers for refractive error and myopia. Human genetics 3 39774722
2022 Correlations of expression of nuclear and mitochondrial genes in triploid fish. G3 (Bethesda, Md.) 1 35924985

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