| 2008 |
VAC14/Vac14 is composed entirely of HEAT repeats and functions as a scaffold protein for the PI(3,5)P2 regulatory complex, making direct contact with Fig4, Fab1, Vac7, and Atg18. A missense mutation (ingls mouse) in Vac14 prevents association with Fab1, generating a partial complex. Vac14 mediates three distinct mechanisms for the rapid interconversion of PI3P and PI(3,5)P2. |
Yeast and mouse genetic analysis, co-immunoprecipitation, structural prediction, analysis of ingls mouse mutant with biochemical characterization |
The EMBO journal |
High |
19037259
|
| 2003 |
In yeast, Vac14 is required for the vacuolar localization of the PI(3,5)P2 phosphatase Fig4; in the absence of Vac14, Fig4-GFP no longer localizes to the vacuole. Fig4 physically associates with Vac14 in a common membrane-associated complex. Vac14 both positively regulates Fab1 kinase activity and directs the localization/activation of Fig4. |
GFP localization microscopy, co-immunoprecipitation, in vitro phosphatase assay, yeast genetics (deletion mutants) |
Molecular biology of the cell |
High |
14528018
|
| 2007 |
Loss of Vac14 in mice results in near-complete loss of PI(3,5)P2 and defects in endosome-to-TGN retrograde trafficking, establishing Vac14 as an essential regulator of PI(3,5)P2 synthesis required for membrane trafficking in vivo. |
Vac14 knockout mouse, lipid analysis, membrane trafficking assays, vacuole morphology |
Proceedings of the National Academy of Sciences of the United States of America |
High |
17956977
|
| 2002 |
Vac14 is an upstream activator of Fab1-catalysed PI(3,5)P2 synthesis; vac14Δ cells make very little PI(3,5)P2 and fail to respond to hyperosmotic shock. FAB1 overexpression corrects vac14Δ defects. Vac14 is essential for regulated PI(3,5)P2 synthesis and for sorting of proteins to the vacuole lumen via multivesicular bodies. |
Yeast genetics (deletion mutants, overexpression), phosphoinositide lipid analysis, GFP trafficking assays, hyperosmotic shock |
Current biology : CB |
High |
12062051
|
| 2004 |
Human VAC14 (ArPIKfyve) physically associates with PIKfyve, co-fractionates and co-localizes with it on intracellular membranes, and positively regulates PIKfyve lipid kinase activity. siRNA knockdown of hVac14 decreases PIKfyve kinase activity and PI(3,5)P2 levels; ectopic expression increases PIKfyve kinase activity and PI(3,5)P2. |
Co-immunoprecipitation, co-fractionation, siRNA knockdown, in vitro lipid kinase assay, intracellular lipid labeling |
Molecular and cellular biology |
High |
15542851
|
| 2007 |
Mammalian VAC14 (ArPIKfyve) is part of a stable ternary complex with PIKfyve and Sac3 (the mammalian Fig4 ortholog). Sac3 co-fractionates and co-localizes with ArPIKfyve and PIKfyve. The ternary complex couples PI(3,5)P2 synthesis (PIKfyve) with turnover (Sac3) and regulates early endosome dynamics. |
Co-immunoprecipitation of endogenous proteins, subcellular fractionation, co-localization, in vitro phosphatase assay, siRNA knockdown with lipid measurements, in vitro endosome reconstitution assay |
The Journal of biological chemistry |
High |
17556371
|
| 2008 |
ArPIKfyve (VAC14) organizes the PIKfyve-ArPIKfyve-Sac3 (PAS) complex through both homomeric (self-interaction via conserved C-terminal domain) and heteromeric interactions. ArPIKfyve is the principal organizer, interacting with both Sac3 and PIKfyve; Sac3 is permissive for maximal PIKfyve-ArPIKfyve association. Introduction of C-terminal ArPIKfyve peptide disassembles the PAS complex and reduces PIKfyve lipid kinase activity in vitro. |
Co-immunoprecipitation in transfected cells with single/double/triple combinations, in vitro PIKfyve lipid kinase assay, dominant-negative peptide competition, GLUT4 translocation assay |
Journal of molecular biology |
High |
18950639
|
| 2009 |
Within the PAS complex, the Cpn60_TCP1 domain of PIKfyve is a major determinant for associating the ArPIKfyve-Sac3 subcomplex. Sac3 assembled in the PAS complex remains an active PI(3,5)P2 phosphatase; phosphatase-deficient Sac3(D488A) eliminates the vacuolar phenotype caused by kinase-deficient PIKfyve, demonstrating that Sac3 activity within the complex drives PI(3,5)P2 turnover. |
Biochemical domain mapping with truncation/point mutants, vacuole morphology assay as functional readout, co-expression of catalytic mutants |
The Journal of biological chemistry |
High |
19840946
|
| 2010 |
ArPIKfyve (VAC14) stabilizes Sac3 protein by protecting it from rapid proteasome-dependent degradation. Knockdown of ArPIKfyve reduces Sac3 steady-state levels; overexpression of ArPIKfyve extends Sac3 half-life (from ~18.8 min). The pathogenic CMT4J mutation Sac3(I41T) cannot be stabilized by ArPIKfyve, suggesting failure of this stability mechanism underlies CMT4J pathogenesis. |
Cycloheximide chase assay, proteasome inhibitor experiments, siRNA knockdown, overexpression, co-immunoprecipitation |
The Journal of biological chemistry |
High |
20630877
|
| 2007 |
ArPIKfyve (VAC14) physically associates with PIKfyve in 3T3-L1 adipocytes in an insulin-independent manner. Loss of either ArPIKfyve or PIKfyve by siRNA depletes PI(3,5)P2 and reduces insulin-stimulated glucose uptake, GLUT4 surface accumulation, and Akt phosphorylation, establishing the ArPIKfyve-PIKfyve-PI(3,5)P2 axis as required for insulin-regulated GLUT4 translocation. |
siRNA knockdown, co-immunoprecipitation, in vitro lipid kinase assay on isolated membranes, glucose uptake assay, GLUT4 surface quantification |
Experimental cell research |
High |
17475247
|
| 2012 |
VAC14 localizes to endocytic organelles in fibroblasts and neurons, and shows pronounced synaptic localization in hippocampal neurons. Loss of VAC14 enhances miniature excitatory postsynaptic current amplitude and increases surface levels of AMPA receptor subunit GluA2, due to diminished regulated endocytosis of AMPA receptors. Re-introduction of VAC14 in postsynaptic cells reverses these effects. |
Immunofluorescence localization, electrophysiology (mEPSC recording) in Vac14-/- neurons, surface biotinylation of AMPA receptors, rescue by postsynaptic VAC14 re-expression |
The EMBO journal |
High |
22842785
|
| 2013 |
Vac14 forms a homodimer/multimer, and Vac14 multimerization is prerequisite for Fab1 complex assembly. Monomeric Vac14 mutants (with mutations in conserved C-terminal motifs) fail to interact with Fab1 or Fig4, have enlarged vacuoles, and cannot generate PI(3,5)P2 in response to hyperosmotic shock, demonstrating that Vac14 self-interaction is the first molecular event in Fab1 complex assembly. |
Co-immunoprecipitation with Vac14 mutants, yeast vacuole morphology, hyperosmotic shock PI(3,5)P2 synthesis assay, two-hybrid analysis |
The Journal of biological chemistry |
High |
23389034
|
| 2006 |
VAC14 interacts with the PDZ domain of neuronal nitric oxide synthase (nNOS) through a novel internal PDZ-recognition motif that is beta-finger independent. Deletion mapping and mutational analysis of Vac14 defined the essential residues of this internal motif. |
In vitro binding assays with Vac14 deletion constructs, mutational analysis of PDZ interaction motif |
FEBS letters |
Medium |
17161399
|
| 2004 |
In 3T3-L1 adipocytes, hyperosmotic stress induces a marked PI(3,5)P2 increase that is fully dependent on the ArPIKfyve-PIKfyve axis; siRNA depletion of either ArPIKfyve or PIKfyve abolishes the hyperosmotically activated PI(3,5)P2 rise. |
siRNA knockdown of ArPIKfyve and PIKfyve, 32P lipid labeling and measurement in 3T3-L1 adipocytes |
The Journal of biological chemistry |
Medium |
15546865
|
| 2017 |
Decreased VAC14 expression increases plasma membrane cholesterol, which facilitates Salmonella docking and invasion. The mechanism linking VAC14 to cholesterol homeostasis at the plasma membrane was established through siRNA knockdown and cholesterol measurement experiments. |
siRNA knockdown of VAC14, plasma membrane cholesterol quantification, Salmonella invasion assay, zebrafish infection model |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
28827342
|
| 2014 |
VAC14 interacts with Rab9 and the Rab7 GAP TBC1D15, linking the VAC14 complex to endolysosomal vesicular transport regulation. These interactions were validated by reciprocal co-immunoprecipitation and proximity ligation assay. |
Protein affinity purification combined with MudPIT mass spectrometry, reciprocal co-immunoprecipitation, proximity ligation assay |
Molecular & cellular proteomics : MCP |
Medium |
24578385
|
| 2015 |
The ArPIKfyve-Sac3 heterodimer (VAC14-Sac3 binary complex) interacts with Synphilin-1 (Sph1) in brain, as identified by mass spectrometry. Modulation of ArPIKfyve/Sac3 levels alters aggregation properties of Sph1-GFP through mechanisms involving increased cytosolic partitioning and basal autophagy-mediated clearance. |
Mass spectrometry of brain-derived ArPIKfyve-Sac3 interactors, RNA silencing and overexpression in mammalian cell lines including primary neurons, GFP aggregation assays |
The Journal of biological chemistry |
Medium |
26405034
|
| 2021 |
BioID proximity labeling of Vac14 identified COPI subunit COPB1 and the GTPase Arf1 (required for COPI assembly) as proximal interactors of Vac14, validated by proximity ligation assay, suggesting a functional link between Vac14 and Golgi-associated COPI complex in endosomal dynamics. |
BioID proximity-dependent biotin labeling, mass spectrometry, proximity ligation assay |
Journal of proteome research |
Low |
34554760
|
| 2025 |
VAC14 forms a star-shaped pentameric scaffold (medium-resolution structure). Atomic-resolution AlphaFold2 prediction combined with cryo-EM maps revealed that disease-linked mutations reside at VAC14-VAC14 interfaces. Mutations disrupting VAC14 oligomerization cause defects in PI(3,5)P2 generation, VAC14 localization, and Fab1/PIKfyve activity. In human VAC14 KO cells, patient mutations are defective in PIKfyve-VAC14-FIG4 complex formation (pull-down), VAC14 oligomerization (fluorescence-detection size-exclusion chromatography), and colocalization with VPS35-positive endosomes. |
CryoEM structure, AlphaFold2 modeling, yeast genetics with oligomerization interface mutants, lipid analysis, pull-down assay in human KO cells, fluorescence-detection size-exclusion chromatography, colocalization microscopy |
Molecular biology of the cell |
High |
40305106
|
| 2016 |
VAC14 variants in the dimerization domain (p.Ala582Ser/p.Ser583Leu) cause pediatric neurological disease with PI(3,5)P2 deficiency. Vacuolization of patient fibroblasts was rescued by transfection of wild-type VAC14 cDNA, establishing that the patient variants are loss-of-function. |
Exome sequencing, patient fibroblast vacuole assay, rescue by wild-type VAC14 transfection |
American journal of human genetics |
Medium |
27292112
|
| 2023 |
PI(3,5)P2 synthesized by the FIG4-VAC14 pathway inhibits the lysosomal chloride transporter ClC-7. Knockout of CLCN7 corrects lysosomal swelling and partially corrects lysosomal hyperacidification in FIG4 null cells, and dominant-negative CLCN7 in Fig4 null mice improved growth, neurological function, and lifespan by 20%, placing VAC14/FIG4-dependent PI(3,5)P2 upstream of ClC-7 in lysosomal regulation. |
CLCN7/CLCN6 knockout in FIG4 null cells, dominant-negative CLCN7 in Fig4 null mouse, lysosomal morphology and pH assays, in vivo phenotyping |
PLoS genetics |
High |
37363915
|
| 2020 |
VAC14 homodimerization can be altered by missense mutations at the C-terminal dimerization domain; p.Leu648Phe and p.Ala562Val mutations enhance VAC14 homodimer formation compared to wildtype, while p.Arg623His does not, as measured in stably transfected SH-SY5Y cells. |
Stable overexpression in SH-SY5Y cells, co-immunoprecipitation to assess homodimer formation, patient fibroblast analysis |
Parkinsonism & related disorders |
Low |
32949958
|
| 2016 |
siRNA knockdown of VAC14 in stem cell-derived peripheral neuronal cells increased docetaxel sensitivity, measured by decreased neurite processes and branches, indicating VAC14 is required for peripheral neuronal resilience to taxane-induced damage. |
siRNA knockdown in stem cell-derived peripheral neurons, neurite morphology quantification after docetaxel treatment |
Clinical cancer research |
Low |
27143689
|
| 2024 |
Under ethanol stress in yeast, Vac14 dissociates from Atg18, its interaction partner in the Fab1 complex; this dissociation is linked to reduced PI(3,5)P2 levels caused by Fab1 downregulation, resulting in Atg18 membrane detachment and vacuole fusion. |
Fluorescence microscopy with PI(3,5)P2 sensor, genetic analysis with hyperactive Fab1 mutant, co-localization of Vac14 and Atg18 |
bioRxivpreprint |
Low |
|