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Showing TNPO2TRN2 is a alias.

TNPO2

Transportin-2 · UniProt O14787

Length
897 aa
Mass
101.4 kDa
Annotated
2026-06-10
16 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TNPO2 (Transportin-2) is a non-classical nuclear transport receptor whose dosage and cargo interactions govern nucleocytoplasmic distribution of developmental and neuronal proteins (PMID:34314705). It controls subcellular localization of estrogen receptor-α (ERα) by competitively binding the basic NLS of ERα against importin-α, thereby inhibiting importin-α/β-dependent ERα nuclear import rather than exporting it; this retention engages PY motifs of ERα and modulates downstream PI3K/AKT phosphorylation, with TNPO2 knockdown enhancing ERα nuclear localization (PMID:33122699). In neurons, TNPO2 is required for maintenance and survival, and both loss and gain of activity produce dosage-dependent developmental defects; pathogenic human variants confer graded severity that maps to functional domains, with RAN-binding-domain variants most deleterious, acidic-loop variants least, and cargo-binding-domain variants showing tissue-dependent effects (PMID:34314705). In gastric cancer cells, TNPO2 acts downstream of a DYNC1I1→SP1→P300 transcriptional axis to drive proliferation and suppress apoptosis via P21 (PMID:31605449). Additional binding partners and cargoes beyond these contexts have not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2019 Medium

    Established a transcriptional and pro-tumorigenic role for TNPO2 by placing it downstream of a defined regulatory cascade in cancer cells.

    Evidence Expression profiling, siRNA knockdown, ChIP for SP1 and P300-acetylated histones at the TNPO2 promoter, and proliferation/apoptosis assays in gastric cancer cells

    PMID:31605449

    Open questions at the time
    • The P21-dependent mechanism downstream of TNPO2 is not fully dissected
    • Whether TNPO2's transport function contributes to the proliferative phenotype is untested
  2. 2020 Medium

    Defined a specific molecular mechanism by which TNPO2 retains a cargo in the cytoplasm, showing it competes with importin-α at the cargo NLS rather than mediating export.

    Evidence Co-IP, siRNA knockdown with nuclear/cytoplasmic fractionation, phosphorylation assays, and PY-motif mutant ERα constructs

    PMID:33122699

    Open questions at the time
    • Demonstrated for ERα in one cell system; generality to other cargoes unknown
    • Direct competition kinetics with importin-α not quantified
  3. 2021 High

    Connected TNPO2 dosage and domain architecture to neuronal maintenance and human neurodevelopmental disease, mapping variant severity to specific functional domains.

    Evidence Drosophila RNAi, mutant alleles, and ectopic expression of wild-type and patient-variant TNPO2 with lethality, eye/wing morphology, and neuronal activity/survival readouts

    PMID:34314705

    Open questions at the time
    • Molecular cargoes underlying the neuronal requirement are not identified
    • Mechanistic link between domain-specific transport defects and fly phenotypes is inferred, not biochemically resolved
  4. 2023 Low

    Nominated a candidate developmental cargo/partner (MAB21L2) for TNPO2.

    Evidence Yeast two-hybrid screens using human adult retina and zebrafish embryo libraries

    PMID:36576422

    Open questions at the time
    • Single Y2H screen with no Co-IP or pulldown validation for the TNPO2-MAB21L2 pair
    • Functional consequence of any interaction untested
  5. 2026 Medium

    Tested whether TNPO2 mRNA shares the nuclear-envelope localization of its C. elegans ortholog, establishing a species-specific difference.

    Evidence smiFISH and fluorescence microscopy in U2OS, HeLa, and pluripotent stem cells (preprint)

    PMID:42239225

    Open questions at the time
    • Preprint, single lab
    • Negative mRNA-localization result does not address TNPO2 protein localization

Open questions

Synthesis pass · forward-looking unresolved questions
  • The full cargo repertoire of TNPO2 and how cargo selectivity, RAN-binding, and the acidic loop coordinate to drive its transport cycle remain undefined.
  • No structural model of TNPO2-cargo or TNPO2-RAN complexes in the corpus
  • Direct biochemical validation of most candidate cargoes absent

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140104 molecular carrier activity 1
Partners

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2020 TNPO2 is involved in E2-dependent cytoplasmic retention of oestrogen receptor-α (ERα) via the proline/tyrosine (PY) motifs of ERα. TNPO2 does not mediate nuclear export of ERα but instead competitively binds to the basic nuclear localisation signal (NLS) of ERα with importin-α to inhibit importin-α/β-dependent ERα nuclear import. TNPO2 knockdown enhances nuclear localisation of ERα and reduces PI3K/AKT phosphorylation in the presence of E2. Co-immunoprecipitation, siRNA knockdown with nuclear/cytoplasmic fractionation, phosphorylation assays; PY-motif mutant ERα constructs Scientific reports Medium 33122699
2021 Drosophila dTnpo (ortholog of TNPO2) is expressed in a subset of neurons and is essential for neuronal maintenance and function; RNAi-mediated downregulation in mature neurons disrupts neuronal activity and survival. Both loss and gain of dTnpo activity cause developmental defects (eye/wing deformities, lethality) in a dosage-dependent manner. Human TNPO2 variants associated with neurodevelopmental delay cause more or less severe developmental abnormalities in flies compared to wild-type TNPO2 when ectopically expressed, with severity correlating with variant position: RAN-binding domain variants are most toxic, acidic loop variants least toxic, and cargo-binding domain variants show tissue-dependent effects. Drosophila RNAi knockdown, mutant alleles, ectopic expression of wild-type and variant TNPO2; phenotypic readouts (lethality, eye/wing morphology, neuronal activity/survival) American journal of human genetics High 34314705
2019 TNPO2 operates downstream of DYNC1I1 in gastric cancer cells. DYNC1I1 upregulates TNPO2 expression by upregulating SP1, which recruits and binds to P300-acetylated TNPO2 promoter region histones to promote TNPO2 expression. TNPO2 in turn promotes gastric cancer cell proliferation and inhibits apoptosis through a mechanism potentially dependent on functional expression of P21. Expression profiling chip, siRNA knockdown, chromatin immunoprecipitation (ChIP) for SP1 and P300-acetylated histones at TNPO2 promoter, cell proliferation and apoptosis assays Cancer medicine Medium 31605449
2023 TNPO2 was identified as an interacting partner of MAB21L2 in yeast two-hybrid screens using human adult retina and zebrafish embryo libraries, suggesting TNPO2 can bind to this developmental/eye protein. Yeast two-hybrid (Y2H) screen Developmental dynamics Low 36576422
2026 TNPO2 mRNA does not localize to the nuclear envelope in human U2OS, HeLa, or pluripotent stem cells (negative finding), in contrast to its C. elegans ortholog IMB-2. TNPO1 protein (but not specifically TNPO2 protein) localizes to the nucleus and its periphery. smiFISH and fluorescence microscopy in multiple human cell lines bioRxivpreprint Medium 42239225

Source papers

Stage 0 corpus · 16 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2021 TNPO2 variants associate with human developmental delays, neurologic deficits, and dysmorphic features and alter TNPO2 activity in Drosophila. American journal of human genetics 36 34314705
2014 Expression status of candidate genes in mesothelioma tissues and cell lines. Mutation research 29 25771974
2023 Identifying Candidate Genes for Litter Size and Three Morphological Traits in Youzhou Dark Goats Based on Genome-Wide SNP Markers. Genes 26 37372363
2019 Interferon-Inducible MicroRNA miR-128 Modulates HIV-1 Replication by Targeting TNPO3 mRNA. Journal of virology 25 31341054
2020 Transportin-2 plays a critical role in nucleocytoplasmic shuttling of oestrogen receptor-α. Scientific reports 17 33122699
2011 Transportin 1 in the mouse brain: appearance in regions of neurogenesis, cerebrospinal fluid production/sensing, and circadian clock. The Journal of comparative neurology 15 21452213
2023 Enlightening the path to NSCLC biomarkers: Utilizing the power of XAI-guided deep learning. Computer methods and programs in biomedicine 14 37866126
2019 TNPO2 operates downstream of DYNC1I1 and promotes gastric cancer cell proliferation and inhibits apoptosis. Cancer medicine 12 31605449
2019 Development of a novel gene signature in patients without Helicobacter pylori infection gastric cancer. Journal of cellular biochemistry 9 31633246
2023 Identification of Distinct Genetic Profiles of Palindromic Rheumatism Using Whole-Exome Sequencing. Arthritis & rheumatology (Hoboken, N.J.) 7 37219934
2023 Identification of HSPA8 as an interacting partner of MAB21L2 and an important factor in eye development. Developmental dynamics : an official publication of the American Association of Anatomists 5 36576422
2024 Integration of the cancer cell secretome and transcriptome reveals potential noninvasive diagnostic markers for bladder cancer. Proteomics. Clinical applications 3 38196148
2022 NeuroSCORE is a genome-wide omics-based model that identifies candidate disease genes of the central nervous system. Scientific reports 1 35361823
2026 Differential mRNA localization of karyopherin-β2 homologs in C. elegans and humans. bioRxiv : the preprint server for biology 0 42239225
2025 High-throughput behavioural phenotyping of 25 C. elegans disease models including patient-specific mutations. BMC biology 0 41013606
2025 A Rare Missense Variant in TNPO2 in an Individual With a Neurodevelopmental Disability. American journal of medical genetics. Part A 0 41311105

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