| 1999 |
SHANK3 (ProSAP2) PDZ domain directly binds SAPAP/GKAP family proteins, as demonstrated by yeast two-hybrid, co-immunoprecipitation, and co-transfection in HEK cells, establishing SHANK3 as a link between SAP90/PSD-95-bound membrane receptors and the cytoskeleton at glutamatergic synapses. |
Yeast two-hybrid, co-immunoprecipitation, co-transfection in HEK cells |
Biochemical and biophysical research communications |
High |
10527873
|
| 2005 |
Postsynaptic targeting of ProSAP2/SHANK3 in hippocampal neurons requires the integrity of the C-terminus, specifically a region encompassing the SAM domain; removal of 54 residues from the N-terminus of the minimal targeting construct resulted in diffuse cytoplasmic distribution, defining a novel C-terminal synaptic targeting signal. |
GFP-tagged deletion constructs expressed in hippocampal neurons, live imaging |
Journal of neurochemistry |
Medium |
15659222
|
| 2006 |
ProSAPiP1 is a novel binding partner of ProSAP2/SHANK3 PDZ domain; the complex co-immunoprecipitates and co-localizes at excitatory spines/synapses, and ProSAPiP1 links SPAR to synapses via ProSAP2/SHANK3, adding a new node to the PSD scaffold network. |
Co-immunoprecipitation, co-localization by confocal microscopy, yeast two-hybrid |
The Journal of biological chemistry |
Medium |
16522626
|
| 2007 |
Tissue-specific expression of SHANK3 (but not SHANK1 or SHANK2) is regulated by DNA methylation of its CpG islands: CpG islands are hypermethylated in tissues with low/absent SHANK3 protein and unmethylated in expressing tissues; SHANK3 protein is reduced in hippocampal neurons after methionine treatment and induced in HeLa cells after 5-Aza-2′-deoxycytidine treatment. |
Bisulfite sequencing, methionine treatment, 5-Aza-2′-deoxycytidine treatment, western blot |
Journal of neurochemistry |
High |
17419801
|
| 2011 |
Shank3 deletion in mice causes defects at striatal synapses and cortico-striatal circuits, demonstrating a critical role for SHANK3 in neuronal connectivity; electrophysiological and biochemical analyses revealed reduced postsynaptic density proteins at striatal synapses. |
Genetic mouse model (Shank3 deletion), electrophysiology, biochemical PSD fractionation, behavioral analysis |
Nature |
High |
21423165
|
| 2011 |
Loss of major Shank3 isoforms (exons 4-9 deletion) reduces synaptic levels of Homer1b/c, GKAP, and GluA1 at the PSD and attenuates activity-dependent redistribution of GluA1-containing AMPA receptors, impairing LTP in CA1 hippocampus. |
Genetic mouse model, PSD biochemical fractionation, western blot, electrophysiology (LTP recordings), immunofluorescence |
Human molecular genetics |
High |
21558424
|
| 2011 |
A C-terminal deletion mutation of Shank3 (Shank3ΔC) causes the mutant protein to interact with wild-type Shank3 and promote its polyubiquitination and redistribution to proteasomes, resulting in >90% reduction of Shank3 at synapses; similarly, the NR1 subunit of NMDA receptor shows increased polyubiquitination and reduced synaptic levels, leading to reduced NMDAR-dependent LTP and LTD and enhanced mGluR-dependent LTD. |
Genetic mouse model, co-immunoprecipitation, polyubiquitination assay, electrophysiology (LTP/LTD recordings), proteasome fractionation |
Cell |
High |
21565394
|
| 2011 |
SHANK3 knockdown in neuronal cultures specifically reduces synaptic expression of mGluR5 (but not other major synaptic proteins), impairs mGluR5-dependent ERK1/2 and CREB phosphorylation, impairs mGluR5-dependent LTD, and reduces mEPSC frequency; these effects are rescued by a positive allosteric modulator of mGluR5. |
RNAi knockdown in neuronal cultures, western blot, immunofluorescence, electrophysiology (mEPSC recording, LTD), ERK/CREB phosphorylation assays |
The Journal of biological chemistry |
High |
21795692
|
| 2011 |
Zinc sequestration by amyloid-beta prevents association of Zn2+ ions with ProSAP2/SHANK3, leading to reduced ProSAP2/Shank3 at the PSD and decreased synapse density; zinc supplementation or pre-saturation of Aβ with zinc countered these effects, demonstrating zinc-dependent regulation of SHANK3 scaffold assembly. |
Cell-based Zn2+ binding assay, rat hippocampal cultures, zinc supplementation, immunofluorescence, synapse density quantification, APP-PS1 mouse model |
Molecular neurodegeneration |
Medium |
21939532
|
| 2012 |
Synaptic levels of ProSAP2/SHANK3 regulate AMPA and NMDA receptor-mediated synaptic transmission and modulate presynaptic structure/function through Neurexin-Neuroligin transsynaptic signaling; ASD-associated mutations in SHANK3 disrupt both postsynaptic receptor signaling and transsynaptic signaling. |
Overexpression and knockdown in rat hippocampal neurons, electrophysiology (AMPAR/NMDAR EPSCs), immunofluorescence of pre/postsynaptic proteins |
The Journal of neuroscience |
Medium |
23100419
|
| 2013 |
SHANK3 expression restores excitatory synaptic transmission deficits in iPSC-derived neurons from Phelan-McDermid syndrome patients; IGF1 treatment promotes formation of mature excitatory synapses lacking SHANK3 but containing PSD95 and NMDA receptors, demonstrating SHANK3's role in excitatory synapse function in human neurons. |
iPSC-derived neurons from PMDS patients, lentiviral SHANK3 re-expression, IGF1 treatment, electrophysiology (synaptic transmission recordings), immunofluorescence |
Nature |
High |
24132240
|
| 2013 |
Shank3 deficiency induces NMDA receptor hypofunction via actin cytoskeleton disruption through the Rac1/PAK/cofilin signaling pathway; Shank3 siRNA reduces NR1 surface expression and NMDAR currents, effects blocked by actin stabilizers and constitutively active Rac1 or PAK, and occluded by Rac1/PAK inhibitors or cofilin activation. |
siRNA knockdown in rat cortical cultures, whole-cell patch clamp (NMDAR currents), surface biotinylation, immunocytochemistry (F-actin), pharmacological manipulation of Rac1/PAK/cofilin pathway |
The Journal of neuroscience |
High |
24089484
|
| 2013 |
Rich2 (Rho-GAP interacting CIP4 homolog 2) is a new Shank3 binding partner identified by proteomics; Rich2-Shank3 interaction increases in dendritic spines during LTP; Rich2 controls AMPA receptor GluA1 exocytosis; disruption of the Rich2-Shank3 complex inhibits spine enlargement and GluA1 exocytosis during LTP. |
Proteomic screen, BRET microscopy, siRNA knockdown, interfering mimetic peptide, AMPA receptor exocytosis assay, spine morphology analysis |
The Journal of neuroscience |
High |
23739967
|
| 2013 |
ProSAP2/Shank3 undergoes activity-dependent synapse-to-nucleus shuttling in hippocampal neurons; a schizophrenia-associated de novo mutation (R1117X) causes constitutive nuclear accumulation independent of synaptic activity and alters transcription of schizophrenia risk genes (Synaptotagmin 1, LRRTM1), identifying novel nuclear interaction partners. |
Immunofluorescence, live imaging, activity manipulation (TTX/bicuculline), nuclear/synaptic fractionation, transcriptional analysis |
Experimental neurology |
Medium |
24382453
|
| 2013 |
The Shank3 ankyrin repeat region is regulated by an intramolecular interaction with the adjacent SPN (Shank/ProSAP N-terminal) domain, which restricts access of ligands Sharpin and α-fodrin; ASD-associated L68P mutation disrupts this intramolecular blockade, resulting in a gain-of-function with enhanced binding to these ligands. |
Binding assays in heterologous cells, expression of wild-type and mutant Shank3 in neurons, electrophysiology (rescue experiments after knockdown) |
The Journal of biological chemistry |
Medium |
23897824
|
| 2014 |
Shank3 gene displays extensive mRNA and protein isoforms from multiple intragenic promoters and alternative splicing; isoform expression is brain-region/cell-type specific, developmentally regulated, activity-dependent, and epigenetically controlled; different Shank3 isoforms show distinct subcellular distributions and differential effects on dendritic spine morphology in hippocampal neurons. |
RT-PCR, quantitative real-time RT-PCR, western blot, cellular imaging of isoform-specific GFP constructs in hippocampal neurons |
Molecular autism |
Medium |
25071925
|
| 2015 |
SHANK3 interacts with TRPV1 via its proline-rich region in dorsal root ganglion sensory neurons and regulates TRPV1 surface expression; Shank3 haploinsufficiency reduces capsaicin-induced spontaneous pain, DRG neuron inward currents, and spinal cord synaptic currents, establishing a peripheral mechanistic role for SHANK3 in pain signaling. |
Co-immunoprecipitation (SHANK3-TRPV1), surface expression assay, patch clamp electrophysiology, conditional knockout (Nav1.8-Cre), behavioral pain assays |
Neuron |
High |
27916453
|
| 2016 |
SHANK3 mutations severely and specifically impair hyperpolarization-activated cation (Ih) channels; SHANK3 protein interacts with HCN channel proteins (HCN1, HCN2, HCN4); chronic pharmacological blockage of Ih channels reproduces SHANK3 mutation phenotypes (altered neuronal morphology and synaptic connectivity), suggesting Ih channelopathy mediates downstream effects. |
Engineered conditional mutations in human neurons, electrophysiology (Ih current recording), co-immunoprecipitation (SHANK3-HCN), pharmacological Ih blockade, mouse Shank3-deficient neurons |
Science |
High |
26966193
|
| 2016 |
Shank3 deficiency causes down-regulation of Akt-mTORC1 signaling through enhanced phosphorylation and activation of PP2A regulatory subunit B56β due to increased steady-state levels of its kinase CLK2; pharmacological/genetic Akt activation or CLK2 inhibition relieves synaptic deficits in Shank3-deficient and PMDS patient-derived neurons. |
Quantitative phosphoproteomics, pharmacological and genetic manipulation (CLK2 inhibition, Akt activation), electrophysiology in patient iPSC-derived neurons, behavioral assays in Shank3-deficient mice |
Science |
High |
26847545
|
| 2016 |
Re-expression of Shank3 in adult mice (after developmental absence) improves synaptic protein composition, spine density, and neural function in the striatum, and rescues social interaction deficits and repetitive grooming, but not anxiety or motor coordination deficits, demonstrating partial reversibility of Shank3-dependent phenotypes. |
Conditional knock-in mouse model (inducible Shank3 re-expression), western blot, spine density analysis, electrophysiology, behavioral assays |
Nature |
High |
26886798
|
| 2016 |
Shank3 deficiency increases nuclear localization of β-catenin (a Shank3-binding protein), which induces HDAC2 upregulation and social deficits; HDAC2 knockdown in PFC rescues social deficits; romidepsin (HDAC inhibitor) treatment elevates expression and histone acetylation of Grin2a and actin-regulatory genes, restoring NMDA-receptor function and actin filaments. |
Co-immunoprecipitation (Shank3-β-catenin), nuclear fractionation, HDAC2 knockdown, HDAC inhibitor treatment, NMDA receptor electrophysiology, ChIP (histone acetylation), behavioral assays |
Nature neuroscience |
High |
29531362
|
| 2016 |
Zinc stabilizes Shank3 at the postsynaptic density; zinc supplementation increases Shank3 labeling intensity at PSD and prevents reversal of NMDA-induced Shank3 accumulation, demonstrated by pre-embedding immunogold electron microscopy. |
Pre-embedding immunogold electron microscopy, depolarization (high K+) and NMDA treatment, zinc supplementation in dissociated rat hippocampal cultures |
PloS one |
Medium |
27144302
|
| 2017 |
Shank3 protein interaction with ZIP4 (zinc uptake transporter) was demonstrated by co-immunoprecipitation; SHANK3-deficient enterocytes show decreased expression of ZIP2 and ZIP4 correlating with SHANK3 levels, and reduced ZIP4 co-localizes with SHANK3 at the plasma membrane, identifying a role for SHANK3 in intestinal zinc homeostasis. |
Co-immunoprecipitation (ZIP4-SHANK3), SHANK3 knockdown in Caco-2 cells, iPSC-derived enterocytes from PMDS patients, immunohistochemistry in Shank3αβ KO mice |
Scientific reports |
Medium |
28345660
|
| 2017 |
SHANK3 regulates intestinal barrier function by modulating ZO-1 expression through a PKCε-dependent pathway; SHANK3 overexpression enhances ZO-1 expression while knockdown reduces it; SHANK3 KO mice show leaky epithelial barrier. |
SHANK3 overexpression/knockdown in intestinal epithelial cells, SHANK3 KO mouse model, TEER/paracellular permeability assays, western blot (ZO-1, PKCε), immunoblotting |
Inflammatory bowel diseases |
Medium |
28906292
|
| 2018 |
USP8 is a deubiquitinating enzyme that regulates SHANK3 ubiquitination and protein levels; USP8 enhances SHANK3 and SHANK1 protein levels via deubiquitination, increases dendritic spine density, and is essential for activity-dependent changes in SHANK3 protein levels. |
Co-immunoprecipitation (USP8-SHANK3), ubiquitination assay, USP8 overexpression/knockdown in primary rat neurons, western blot, dendritic spine analysis |
The Journal of neuroscience |
Medium |
29735556
|
| 2019 |
An ASD-linked missense variant at Shank3 S685 disrupts recruitment of ABI1 and the WAVE complex to the PSD, impairing synapse and dendritic spine development; this function is independent of Shank3's binding to GKAP and Homer, demonstrating modular independent functions of Shank3. |
In vivo phosphorylation profiling, co-immunoprecipitation (Shank3-ABI1/WAVE complex), knock-in mouse model with S685 mutation, dendritic spine analysis, behavioral assays |
Molecular psychiatry |
Medium |
30610205
|
| 2019 |
Conditional knockout of Shank3 in the anterior cingulate cortex (ACC) is sufficient to cause excitatory synaptic dysfunction and social interaction deficits; selective enhancement of ACC activity, SHANK3 restoration in ACC, or systemic AMPA receptor-positive modulator administration improved social behavior in Shank3 mutant mice. |
Conditional knockout (region-specific Cre), electrophysiology (excitatory synaptic transmission), behavioral assays, pharmacological rescue |
Nature neuroscience |
High |
31332372
|
| 2019 |
ERK2 binds Shank3 directly and phosphorylates it at three residues to promote poly-ubiquitination-dependent degradation; genetic deletion or pharmacological inhibition of ERK2 increases Shank3 protein abundance in vivo. |
Kinome-wide siRNA screen, ERK2-Shank3 co-immunoprecipitation/binding, phosphorylation assay, ubiquitination assay, in vivo pharmacological/genetic ERK2 inhibition, western blot |
Molecular psychiatry |
High |
30696942
|
| 2019 |
SHANK3 mutations increase histone methyltransferases EHMT1/2 and H3K9me2 in prefrontal cortex; EHMT1/2 inhibition or knockdown rescues autism-like social deficits and restores NMDAR-mediated synaptic function; Arc was identified as a causal downstream factor for NMDAR function rescue. |
Western blot (EHMT1/2, H3K9me2 in Shank3 KD mice and human postmortem brains), EHMT1/2 inhibitor (UNC0642) treatment, EHMT knockdown in PFC, electrophysiology (NMDAR currents), behavioral assays |
Molecular psychiatry |
High |
30659288
|
| 2020 |
SHANK3 localizes to Z-discs in skeletal muscle sarcomeres and co-immunoprecipitates with α-ACTININ; SHANK3 deficiency leads to shortened Z-discs, impaired acetylcholine receptor clustering at neuromuscular junctions, and motor deficits rescued by troponin activator Tirasemtiv. |
Co-immunoprecipitation (SHANK3-α-ACTININ), immunofluorescence (Z-disc localization), hiPSC-derived myotubes, Shank3Δ11-/- mice, PMDS patient muscle biopsies, behavioral rescue with Tirasemtiv |
Science translational medicine |
High |
32522805
|
| 2020 |
CaMKIIα directly binds Shank3 between residues 829–1130; mutation of Shank3 residues 949Arg-Arg-Lys951 to alanines disrupts CaMKII binding; both Shank3 binding to CaMKII and to LTCCs is required for depolarization-induced CREB phosphorylation and c-Fos expression, establishing Shank3 as a required scaffold for LTCC-to-nucleus signaling. |
Co-immunoprecipitation from mouse forebrain, direct binding assay with purified CaMKIIα, site-directed mutagenesis, shRNA/rescue in hippocampal neurons, CREB phosphorylation and c-Fos expression assays |
The Journal of neuroscience |
High |
32019829
|
| 2020 |
Truncating mutations in SHANK3 that remove postsynaptic targeting sequences expose a nuclear localization signal in the N-terminal part of the protein; truncated SHANK3 interacts with β-catenin via the PDZ domain of SHANK3 and armadillo repeats of β-catenin, sequestering both in nuclear bodies and strongly repressing β-catenin-dependent transcriptional activation. |
Subcellular localization analysis (immunofluorescence, fractionation), co-immunoprecipitation (truncated Shank3-β-catenin), luciferase transcriptional reporter assays, NLS identification and mutagenesis |
Journal of neurochemistry |
Medium |
32202324
|
| 2021 |
Two ASD-associated missense mutations in SHANK3 cause distinct changes in secondary and tertiary protein structure, increased conformational fluctuations (by SAXS and biophysical analysis), and result in altered synaptic targeting and changes in protein turnover at synaptic sites in rat primary hippocampal neurons. |
SAXS, biophysical structural analysis, FRAP in rat hippocampal neurons, synaptic localization analysis |
eLife |
Medium |
33945465
|
| 2021 |
SHANK3 directly interacts with actin through its SPN domain; this interaction is inhibited by an intramolecular closed conformation where the adjacent ARR domain covers the actin-binding interface; actin and Rap1 compete for binding to SHANK3; SHANK3-actin interaction regulates dendritic spine morphology in neurons. |
Molecular simulations, targeted mutagenesis, actin co-sedimentation assay, co-immunoprecipitation, dendritic spine morphology analysis in neurons, integrin activity assay in cancer cells |
Current biology |
High |
34610274
|
| 2022 |
Phosphorylation of Shank3 at S1586 and S1615 bidirectionally gates homeostatic synaptic scaling: sites are hypophosphorylated during scaling up (via PP2A activity) and hyperphosphorylated during scaling down; phosphomimetic mutations prevent scaling up while phosphodeficient mutations prevent scaling down; these phosphorylation states modify Shank3 synaptic localization. |
Deep-scale quantitative phosphoproteomics, immunoaffinity isolation, phosphomimetic/phosphodeficient mutagenesis, PP2A pharmacological inhibition, synaptic scaling assay, Shank3 synaptic localization analysis in neocortical neurons |
eLife |
High |
35471151
|
| 2022 |
SHANK3 interacts with STIM1 via direct binding and promotes proteasome-mediated degradation of STIM1; STIM1 downregulation via SHANK3 induces Nrf2 Ser40 phosphorylation, Nrf2 nuclear translocation, and upregulation of antioxidant genes (NQO1, HO-1), protecting against ischemia/reperfusion-induced oxidative stress and inflammation. |
Co-immunoprecipitation (Shank3-STIM1), Shank3 conditional KO and double KO (Shank3+Stim1), western blot (Nrf2, NQO1, HO-1), in vitro HT22 cell assays, in vivo I/R mouse model |
Redox biology |
Medium |
38064762
|
| 2022 |
CTTNBP2 facilitates SHANK3 co-condensation at dendritic spines through liquid-liquid phase separation; zinc binding to CTTNBP2 promotes liquid-to-gel phase transition, reducing CTTNBP2 mobility and enhancing stability/synaptic retention of CTTNBP2-SHANK3 condensates. |
Co-condensation assays, FRAP, phase separation assays, zinc supplementation, ASD mutation analysis, behavioral assays in mice |
Nature communications |
Medium |
35562389
|
| 2022 |
ADNP interacts with SHANK3 and actin in mouse brain extracts; NAP (ADNP-derived peptide) normalizes Shank3-Adnp-actin interactions as shown by actin co-immunoprecipitation, and NAP treatment ameliorates behavior in Shank3 InsG3680 mutant mice. |
Co-immunoprecipitation (Shank3-Adnp-actin) from mouse brain, NAP treatment, behavioral assays in Shank3 InsG3680 mice |
Molecular psychiatry |
Medium |
35538192
|
| 2022 |
Cardiac Shank3 directly binds CaMKII (demonstrated by IP assay), and this interaction increases in the aged heart; enhanced Shank3/CaMKII binding impedes mitochondrial translocation of CaMKII, inhibiting Parkin-mediated mitophagy and causing mitochondrial dysfunction and cardiac damage. |
Co-immunoprecipitation (cardiac Shank3-CaMKII), cardiac-specific Shank3 conditional KO, mitophagy assays, mitochondrial function assays |
Redox biology |
Medium |
36436456
|
| 2023 |
Shank3 in vagal sensory neurons (nodose ganglion) regulates TRPM2 expression; Shank3 deficiency in Nav1.8-expressing sensory neurons or selective Shank3 knockdown in vagal neurons impairs body temperature regulation and increases LPS-induced systemic inflammation (IL-6), identifying a peripheral, non-synaptic role for SHANK3. |
Conditional Shank3 KO (Nav1.8-Cre), Shank3/Trpm2 knockdown in nodose ganglion, RNAscope in situ hybridization, LPS inflammation model, body temperature measurement |
Frontiers in immunology |
Medium |
36845137
|
| 2009 |
ProSAPiP2 is a novel binding partner of ProSAP2/SHANK3 PDZ domain, expressed in neurons, localized to dendrites and spines and enriched in the PSD; it interacts with actin, potentially linking PSD components to the cytoskeleton. |
Co-immunoprecipitation, immunofluorescence, PSD fractionation, actin binding assay |
Biochemical and biophysical research communications |
Low |
19481056
|
| 2015 |
miR-7, miR-34a, and miR-504 post-transcriptionally regulate SHANK3 expression through direct binding sites in the 3' UTR; overexpression or inhibition of miR-7 and miR-504 affected dendritic spines in hippocampal neurons in a Shank3-dependent manner. |
Luciferase reporter assay (miRNA 3' UTR binding), lentiviral miRNA overexpression in hippocampal neurons, western blot, spine morphology analysis |
Molecular brain |
Medium |
26572867
|
| 2018 |
Shank3 deficiency causes Ih channelopathy in thalamocortical neurons; Shank3 increases HCN channel surface expression in heterologous systems; Shank3Δ13-16 deficiency causes reduction in HCN2 expression and Ih current amplitude, altered resting membrane potential, increased input resistance, and abnormal spike firing—phenotypes resembling HCN2-/- TC neurons. |
Heterologous expression of Shank3 isoforms with HCN channels (surface expression assay), electrophysiology (Ih current recording) in thalamocortical neurons from Shank3 KO mice, comparison with HCN2-/- mice |
The Journal of physiology |
High |
29327340
|
| 2024 |
Shank3 mutation (InsG3680) impairs glutamatergic signaling in oligodendrocytes and reduces expression of myelination-related transcripts and proteins in vivo; SHANK3 has a postsynaptic role in oligodendrocyte precursor cells similar to its role in neurons, and SHANK3 deficiency impairs myelin ultrastructure and axonal conductivity. |
InsG3680 mouse model, iPSC-derived OLs from patient with InsG3680 mutation, electrophysiology (OPC glutamatergic responses), western blot, electron microscopy (myelin ultrastructure), axonal conductivity measurement |
Science advances |
Medium |
39392881
|
| 2025 |
Shank3 SAM domain-mediated oligomerization is essential for the PSD condensate to form a glass-like material state through network percolation; disruption of Shank3 SAM oligomerization softens the PSD condensate, impairs synaptic transmission and plasticity, and causes autistic-like behavior in mice; reconstituted PSD condensate forms a soft glass material without irreversible amyloid structure. |
Reconstituted PSD condensate (in vitro phase separation), rheology (material property measurement), SAM domain oligomerization mutagenesis, electrophysiology (synaptic transmission/plasticity), behavioral assays in knock-in mice |
Cell |
High |
40848728
|