Affinage

CTTNBP2

Cortactin-binding protein 2 · UniProt Q8WZ74

Length
1663 aa
Mass
181.1 kDa
Annotated
2026-06-09
63 papers in source corpus 7 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CTTNBP2 is a neuron-specific cytoskeletal regulator that controls dendritic spine formation and the molecular organization of the postsynaptic compartment (PMID:23015759, PMID:32492416). It binds cortactin through its C-terminal proline-rich domain and governs cortactin mobility and distribution to shape F-actin organization and spine density and morphology (PMID:23015759); in parallel it recruits the PP2A regulatory subunits striatin and zinedin to dendritic spines (PMID:23015759). CTTNBP2 undergoes liquid-liquid phase separation via its C-terminal intrinsically disordered region to form synaptic condensates that co-recruit and retain SHANK3, while zinc binding to its N-terminal coiled-coil drives higher-order assembly and a liquid-to-gel transition that lowers CTTNBP2 mobility and enhances synaptic retention (PMID:35562389). Through this activity CTTNBP2 sustains brain zinc levels and the synaptic targeting of zinc-sensitive, autism-associated proteins of the NMDAR–SHANK pathway; its loss reduces brain zinc, disrupts postsynaptic density ultrastructure, and produces autism-like social deficits that are rescued by zinc supplementation or NMDAR co-agonism (PMID:32492416). Autism-linked mutations impair spine density through distinct mechanisms — loss of the cortactin-binding domain, disruption of an N-to-C intramolecular interaction, or aberrant microtubule association that mislocalizes the protein away from spines — and the corresponding knockin mice show reduced social interaction (PMID:33168105). The resulting social deficits are male-biased and map onto reduced activity in defined cortical circuits including the infralimbic prefrontal cortex, and can be rescued by chemogenetic circuit activation or by nutrient-sensitive (zinc, BCAA/mTOR) manipulations (PMID:36385662).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2012 High

    Established the founding molecular activity of CTTNBP2: how a neuron-specific protein could control dendritic spine formation by acting on the actin cytoskeleton and a phosphatase complex.

    Evidence Reciprocal Co-IP, subcellular fractionation, FRAP, and overexpression/knockdown in primary neurons

    PMID:23015759 PMID:23060955

    Open questions at the time
    • Did not define structural basis of cortactin binding
    • Functional role of PP2A/striatin recruitment to spines left mechanistically open
    • Distinction from paralog CTTNBP2NL noted but not fully resolved
  2. 2020 High

    Connected CTTNBP2 to brain zinc homeostasis and the NMDAR–SHANK synaptic pathway, providing a mechanistic and therapeutic link to autism phenotypes.

    Evidence Cttnbp2 knockout and ASD knockin mice, zinc measurement, synaptic fractionation, EM of PSD, and pharmacological rescue (zinc, D-cycloserine)

    PMID:32492416

    Open questions at the time
    • Did not establish how CTTNBP2 loss lowers brain zinc
    • Molecular mechanism linking zinc to synaptic protein retention not yet defined
  3. 2020 High

    Showed that distinct ASD-linked mutations converge on reduced spine density through divergent molecular defects, distinguishing cortactin-binding from microtubule-localization mechanisms.

    Evidence Co-IP with cortactin and microtubules, localization in hippocampal neurons, domain-deletion constructs, and M120I knockin behavioral assays

    PMID:33168105

    Open questions at the time
    • Did not resolve the intramolecular N–C interaction structurally
    • Behavioral testing limited to one knockin allele
  4. 2022 High

    Defined the physical basis for synaptic CTTNBP2 organization: zinc-regulated liquid-liquid phase separation that builds SHANK3-containing condensates and tunes their stability.

    Evidence Live imaging of phase separation, FRAP, domain mutagenesis, and zinc-supplementation rescue in ASD knockin mice

    PMID:35562389

    Open questions at the time
    • Stoichiometry of zinc binding to the coiled-coil not quantified
    • In vivo evidence that condensate state controls behavior remains indirect
  5. 2023 High

    Placed CTTNBP2 deficits within specific brain circuits and revealed sex-biased molecular consequences, linking the protein to nutrient/mTOR signaling.

    Evidence c-Fos mapping, chemogenetic (DREADD) ILA activation, proteomics, and dietary BCAA rescue in male mutant mice

    PMID:36385662

    Open questions at the time
    • Mechanistic basis of sex bias not fully resolved
    • How CTTNBP2 loss alters RRAGC/mTOR signaling not established
  6. 2025 Medium

    Extended the zinc rescue mechanism to protein synthesis, proposing that neuronal ribosome biogenesis underlies zinc-dependent spine and behavioral improvement in a sex-specific manner.

    Evidence Puromycin pulse labeling, proteomics, spine morphometry, and sex-stratified zinc dietary manipulation (preprint)

    Open questions at the time
    • Preprint, single lab, not peer-reviewed
    • Direct link from CTTNBP2 protein activity to translation machinery not biochemically demonstrated

Open questions

Synthesis pass · forward-looking unresolved questions
  • How the cytoskeletal/condensate functions of CTTNBP2 mechanistically feed into zinc homeostasis, mTOR/translation, and the male-biased circuit phenotype remains unresolved.
  • No molecular mechanism linking CTTNBP2 loss to reduced brain zinc
  • Structural model of zinc binding and phase transition lacking
  • Causal chain from condensate state to circuit-level social behavior not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 3 GO:0098772 molecular function regulator activity 1 GO:0140313 molecular sequestering activity 1
Localization
GO:0005886 plasma membrane 3 GO:0005856 cytoskeleton 2
Pathway
R-HSA-112316 Neuronal System 3 R-HSA-1266738 Developmental Biology 2
Complex memberships
CTTNBP2-SHANK3 synaptic condensatePP2A complex

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2012 CTTNBP2 interacts with cortactin and regulates cortactin mobility and distribution in neurons, controlling dendritic spine formation. CTTNBP2 also interacts with striatin and zinedin (regulatory B subunits of PP2A), targeting the PP2A complex to dendritic spines. CTTNBP2NL, despite also binding cortactin, does not regulate dendritic spinogenesis and is associated with stress fibers rather than dendritic spines. Co-immunoprecipitation, subcellular fractionation/localization, overexpression and knockdown in neurons, HEK293 cell binding assays Molecular biology of the cell High 23015759
2012 CTTNBP2 is a neuron-specific protein that regulates F-actin cytoskeletal organization by controlling the mobility and distribution of cortactin, thereby influencing dendritic spine density and morphology. Live imaging, fluorescence recovery after photobleaching (FRAP), overexpression and knockdown in cultured neurons Communicative & integrative biology Medium 23060955
2020 CTTNBP2 deficiency reduces zinc levels in the brain, impairs synaptic targeting of zinc-related autism-associated proteins (including NMDAR-SHANK pathway components), and disrupts dendritic spine formation and postsynaptic density ultrastructure. Zinc supplementation rescues synaptic expression of CTTNBP2-regulated proteins. Administration of D-cycloserine (NMDAR co-agonist) and zinc supplementation improve social behaviors in Cttnbp2-deficient mice. Cttnbp2 knockout and ASD-linked knockin mice, zinc measurement, synaptic fractionation, electron microscopy of postsynaptic density, behavioral assays, pharmacological rescue Cell reports High 32492416
2022 CTTNBP2 undergoes liquid-liquid phase separation (LLPS) via its C-terminal intrinsically disordered region, forming self-assembled condensates that facilitate SHANK3 co-condensation at dendritic spines. Zinc binds the N-terminal coiled-coil region of CTTNBP2, promoting higher-order assemblies and a liquid-to-gel phase transition that reduces CTTNBP2 mobility and enhances synaptic retention of CTTNBP2 condensates. ASD-linked mutations alter condensate formation and synaptic retention, and these defects are ameliorated by zinc supplementation. Live imaging of phase separation in neurons, FRAP, deletion/domain mutant analysis, ASD knockin mouse behavioral assays, zinc supplementation rescue Nature communications High 35562389
2020 Three ASD-linked mutations in CTTNBP2 (M120I, R533*, D570Y) impair dendritic spine density through divergent molecular mechanisms: R533* lacks the C-terminal proline-rich domain required for cortactin interaction; M120I disrupts cortactin interaction via an N-C terminal intramolecular interaction; D570Y increases microtubule association, causing dendritic (non-spine) localization of CTTNBP2 and reducing its synaptic function. Heterozygous M120I knockin mice exhibit reduced social interaction. Co-immunoprecipitation of CTTNBP2 with cortactin and microtubule, subcellular localization in hippocampal neurons, knockin mouse behavioral assays, domain deletion constructs Acta neuropathologica communications High 33168105
2023 Cttnbp2 mutation results in male-biased social deficits associated with reduced neural activity in seven brain regions including the infralimbic area (ILA) of the medial prefrontal cortex upon social stimulation. Chemogenetic activation of ILA rescues social deficits in male mutant mice. Male-specific downregulation of synaptic zinc-binding proteins (SHANK2, PSD-95) and female-specific upregulation of RRAGC (mTOR upstream regulator) are identified. Increased BCAA intake activates mTOR and rescues neuronal responses and social behaviors in male Cttnbp2 mutant mice. C-FOS staining, chemogenetic (DREADD) manipulation, proteomics, behavioral assays, dietary BCAA supplementation Brain : a journal of neurology High 36385662
2013 In Brown Swiss cattle, non-synonymous mutations (lysine to glutamic acid, and synonymous) in CTTNBP2 are among 41 concordant diagnostic SNPs for Weaver Syndrome (Bovine Progressive Degenerative Myeloencephalopathy), implicating CTTNBP2 in neurological disease in this breed. Genome-wide SNP association mapping, whole genome sequencing, haplotype analysis across 841 animals PloS one Low 23527149
2025 In male Cttnbp2 ASD mutant mice, zinc supplementation enhances ribosome biogenesis and increases dendritic spine density and size, alleviating male-biased social deficits. Neurons (not astrocytes) respond to zinc to enhance protein synthesis. Female Cttnbp2 mutants are resilient to differential zinc intake, associated with elevated mTOR phosphorylation and increased translational initiation factor levels in female brains. Puromycin pulse labeling for protein synthesis, proteomic/bioinformatic analysis, dendritic spine morphometry, behavioral assays, zinc dietary manipulation in sex-stratified cohorts bioRxivpreprint Medium
2025 Supplement cocktails containing zinc, branched-chain amino acids (BCAA), and serine improve social behaviors in Cttnbp2+/M120I ASD mouse models, altering synaptic and metabolic proteomes, consistent with a role for CTTNBP2 in nutrient-sensitive synaptic regulation. Behavioral assays, synaptic proteomics, dietary supplementation in Cttnbp2+/M120I knockin mice bioRxivpreprint Low

Source papers

Stage 0 corpus · 63 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1992 TGEV corona virus ORF4 encodes a membrane protein that is incorporated into virions. Virology 130 1316677
1998 The early region 4 orf4 protein of human adenovirus type 5 induces p53-independent cell death by apoptosis. Journal of virology 121 9696808
2012 Identification and functional analysis of the novel ORF4 protein encoded by porcine circovirus type 2. Journal of virology 110 23152517
1997 Posttranslational processing and identification of a neutralization domain of the GP4 protein encoded by ORF4 of Lelystad virus. Journal of virology 94 9223499
2003 Complement regulation by Kaposi's sarcoma-associated herpesvirus ORF4 protein. Journal of virology 81 12477863
2007 Genetic analysis of varicella-zoster virus ORF0 to ORF4 by use of a novel luciferase bacterial artificial chromosome system. Journal of virology 80 17581997
2001 The adenovirus E4-ORF4 splicing enhancer protein interacts with a subset of phosphorylated SR proteins. The EMBO journal 80 11179230
2001 Induction of ppGpp synthesis in Streptomyces coelicolor A3(2) grown under conditions of nutritional sufficiency elicits actII-ORF4 transcription and actinorhodin biosynthesis. Molecular microbiology 65 11123695
1989 Open reading frame 5 (ORF5), encoding a ferredoxinlike protein, and nifQ are cotranscribed with nifE, nifN, nifX, and ORF4 in Rhodobacter capsulatus. Journal of bacteriology 53 2708314
2020 CTTNBP2 Controls Synaptic Expression of Zinc-Related Autism-Associated Proteins and Regulates Synapse Formation and Autism-like Behaviors. Cell reports 51 32492416
2012 CTTNBP2, but not CTTNBP2NL, regulates dendritic spinogenesis and synaptic distribution of the striatin-PP2A complex. Molecular biology of the cell 51 23015759
2004 Activation of adenovirus type 2 early region 4 ORF4 cytoplasmic death function by direct binding to Src kinase domain. The Journal of biological chemistry 46 15070897
2006 Human coronavirus 229E encodes a single ORF4 protein between the spike and the envelope genes. Virology journal 39 17194306
2005 Varicella-zoster virus ORF4 latency-associated protein is important for establishment of latency. Journal of virology 38 15890936
2012 Identification of the actinorhodin monomer and its related compound from a deletion mutant of the actVA-ORF4 gene of Streptomyces coelicolor A3(2). Bioorganic & medicinal chemistry letters 37 22765902
2021 Ectopic Expression of Genotype 1 Hepatitis E Virus ORF4 Increases Genotype 3 HEV Viral Replication in Cell Culture. Viruses 36 33430442
1996 redD and actII-ORF4, pathway-specific regulatory genes for antibiotic production in Streptomyces coelicolor A3(2), are transcribed in vitro by an RNA polymerase holoenzyme containing sigma hrdD. Journal of bacteriology 36 8655533
2014 ORF4-protein deficient PCV2 mutants enhance virus-induced apoptosis and show differential expression of mRNAs in vitro. Virus research 34 24503223
2006 Persistent high frequencies of varicella-zoster virus ORF4 protein-specific CD4+ T cells after primary infection. Journal of virology 34 16973581
2022 Phase separation and zinc-induced transition modulate synaptic distribution and association of autism-linked CTTNBP2 and SHANK3. Nature communications 33 35562389
1994 Cloning, expression, and sequence analysis of the ORF4 gene of the porcine reproductive and respiratory syndrome virus MN-1b. Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc 31 7948197
2018 Caspase-Dependent Apoptosis Induction via Viral Protein ORF4 of Porcine Circovirus 2 Binding to Mitochondrial Adenine Nucleotide Translocase 3. Journal of virology 30 29491154
1994 Genetics of the serine cycle in Methylobacterium extorquens AM1: identification, sequence, and mutation of three new genes involved in C1 assimilation, orf4, mtkA, and mtkB. Journal of bacteriology 29 7961516
2002 High-yield actinorhodin production in fed-batch culture by a Streptomyces lividans strain overexpressing the pathway-specific activator gene actll-ORF4. Journal of industrial microbiology & biotechnology 26 12074050
2020 Autism-linked mutations of CTTNBP2 reduce social interaction and impair dendritic spine formation via diverse mechanisms. Acta neuropathologica communications 25 33168105
2018 An analysis of two open reading frames (ORF3 and ORF4) of rat hepatitis E virus genome using its infectious cDNA clones with mutations in ORF3 or ORF4. Virus research 25 29471051
2020 lncRNA HEIH accelerates cell proliferation and inhibits cell senescence by targeting miR-3619-5p/CTTNBP2 axis in ovarian cancer. Menopause (New York, N.Y.) 21 33110047
2019 Granzyme B Cleaves Multiple Herpes Simplex Virus 1 and Varicella-Zoster Virus (VZV) Gene Products, and VZV ORF4 Inhibits Natural Killer Cell Cytotoxicity. Journal of virology 18 31462576
2016 Functional Characterization of EscK (Orf4), a Sorting Platform Component of the Enteropathogenic Escherichia coli Injectisome. Journal of bacteriology 18 27795324
2016 The ORF4 protein of porcine circovirus type 2 antagonizes apoptosis by stabilizing the concentration of ferritin heavy chain through physical interaction. The Journal of general virology 16 27030984
2013 Fine mapping for Weaver syndrome in Brown Swiss cattle and the identification of 41 concordant mutations across NRCAM, PNPLA8 and CTTNBP2. PloS one 15 23527149
2020 Generation of a porcine reproductive and respiratory syndrome virus expressing a marker gene inserted between ORF4 and ORF5a. Archives of virology 13 32474688
2020 ORF4 of the Temperate Archaeal Virus SNJ1 Governs the Lysis-Lysogeny Switch and Superinfection Immunity. Journal of virology 13 32522850
2009 orf4 of the Bacillus cereus sigB gene cluster encodes a general stress-inducible Dps-like bacterioferritin. Journal of bacteriology 13 19429618
2007 Molecular characterization of the rhesus rhadinovirus (RRV) ORF4 gene and the RRV complement control protein it encodes. Journal of virology 13 17287274
2015 Porcine circovirus type 2 ORF4 protein binds heavy chain ferritin. Journal of biosciences 12 26333394
1996 Intracellular distribution of the ORF4 gene product of varicella-zoster virus is influenced by the IE62 protein. The Journal of general virology 12 8757993
2015 Determination of the proteins encoded by BmBDV VD1-ORF4 and their interacting proteins in BmBDV-infected midguts. Current microbiology 10 25561406
2007 The orf4 gene of the enterobacterial ICE, R391, encodes a novel UV-inducible recombination directionality factor, Jef, involved in excision and transfer of the ICE. FEMS microbiology letters 10 17504243
2023 Sex bias in social deficits, neural circuits and nutrient demand in Cttnbp2 autism models. Brain : a journal of neurology 9 36385662
2021 Sequence to structure analysis of the ORF4 protein from Hepatitis E virus. Bioinformation 9 35539889
2021 Carrot mottle virus ORF4 movement protein targets plasmodesmata by interacting with the host cell SUMOylation system. The New phytologist 8 33774829
2017 Myeloablation-associated deletion of ORF4 in a human coronavirus 229E infection. NPJ genomic medicine 8 29263840
2013 Identification of Bombyx mori bidensovirus VD1-ORF4 reveals a novel protein associated with viral structural component. Current microbiology 8 23328902
2012 Neuron-specific regulation on F-actin cytoskeletons: The role of CTTNBP2 in dendritic spinogenesis and maintenance. Communicative & integrative biology 8 23060955
1999 The putative Orf4 of broad-host-range conjugative plasmid R446 could Be related to the H-NS family of bacterial nucleoid-associated proteins. Plasmid 8 10087216
1996 Enhancement of varicella-zoster virus infection in cell lines expressing ORF4- or ORF62-encoded proteins. Journal of medical virology 8 8877757
2023 Immunization of Mice with Virus-Like Vesicles of Kaposi Sarcoma-Associated Herpesvirus Reveals a Role for Antibodies Targeting ORF4 in Activating Complement-Mediated Neutralization. Journal of virology 7 36757205
2014 Nuclear localization signals of varicella zoster virus ORF4. Virus genes 5 24398930
2013 A regulatory gene (ECO-orf4) required for ECO-0501 biosynthesis in Amycolatopsis orientalis. Journal of basic microbiology 5 23681482
2022 Dendritic Spine in Autism Genetics: Whole-Exome Sequencing Identifying De Novo Variant of CTTNBP2 in a Quad Family Affected by Autism Spectrum Disorder. Children (Basel, Switzerland) 4 36670631
2017 Effects of Shield1 on the viral replication of varicella‑zoster virus containing FKBP‑tagged ORF4 and 48. Molecular medicine reports 3 29115621
2025 Characterization of ActVI-ORF3 and ActVI-ORF4 as Lactonizing and Delactonizing Enzymes in Relation to Metabolic Flux in Actinorhodin Biosynthesis. Chembiochem : a European journal of chemical biology 2 40051137
2023 Porcine Circovirus 2 Increases the Frequency of Transforming Growth Factor-β via the C35, S36 and V39 Amino Acids of the ORF4. Viruses 2 37515288
2023 Human neurotropic polyomavirus, JC virus, late coding region encodes a novel nuclear protein, ORF4, which targets the promyelocytic leukemia nuclear bodies (PML-NBs) and modulates their reorganization. Virology 2 37741199
2019 [Combination of mass spectrometry and GST pull-down techniques to study potential interacting protein of PCV2 ORF4]. Sheng wu gong cheng xue bao = Chinese journal of biotechnology 2 30756533
2007 Low expression of ORF4, a dominant negative variant of peroxisome proliferator-activated receptor gamma, in colorectal adenocarcinoma. Oncology reports 2 17611675
2005 Cloning and expression of a functionally active truncated N-glycosylated KSHV ORF4/KCP/kaposica in the methylotrophic yeast Pichia pastoris. Annals of the New York Academy of Sciences 2 16387704
2025 Changes in ORF4 of HCoV-229E under different culture conditions. The Journal of general virology 1 40638224
2007 [Construction and the immunogenicity of the recombinant Modified Vaccinia Virus Ankala co-expressing ORF4, ORF5 and ORF6 genes of porcine reproductive and Respiratory Syndrome Virus NJ-a strain]. Wei sheng wu xue bao = Acta microbiologica Sinica 1 17552247
2007 [Expression and subcellular localization of the ORF4 gene of barley yellow dwarf virus GAV strain in baculovirus-insect cell expression system]. Sheng wu gong cheng xue bao = Chinese journal of biotechnology 1 18257245
2026 Human Coronavirus 229E Uses ORF4/4a to Antagonize the Host Restriction Factor SERINC5. MedComm 0 42253925
2023 Human adenovirus oncolytic properties and the inhibitory role of E4 orf4 and E4 orf6/7 on endogenously activated NF-κB. Biochemistry and biophysics reports 0 38205184

Missed literature

Know a paper Affinage missed for CTTNBP2? Flag it for the maintainers and the community.

No submissions yet.