Affinage

SH3PXD2B

SH3 and PX domain-containing protein 2B · UniProt A1X283

Length
911 aa
Mass
101.6 kDa
Annotated
2026-04-28
13 papers in source corpus 6 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SH3PXD2B (TKS4) is a Src-phosphorylated scaffold protein that drives podosome assembly, ECM degradation, and cell migration through its PX domain and four SH3 domains. It localizes to podosomes in Src-transformed cells, where it is required for complete podosome rosette formation and recruitment of MT1-MMP; its tyrosine phosphorylation by Src is essential for these functions (PMID:19144821). SH3PXD2B interacts with cortactin and ADAM15 at podosomes and EGF-induced lamellipodia, and its loss impairs lamellipodia formation, cell spreading, and pericellular collagen remodeling, leading to fibrosis in vivo (PMID:21886807, PMID:33234702). Loss-of-function mutations in SH3PXD2B cause Frank-Ter Haar syndrome, a developmental disorder affecting skeletal, cardiovascular, and ocular tissues, as confirmed by human genetics and recapitulation in Tks4-null mice (PMID:20137777).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2009 High

    Establishing SH3PXD2B as a Src substrate required for podosome integrity and ECM degradation resolved how invadopodia/podosome scaffolding depends on tyrosine phosphorylation-driven adaptor recruitment.

    Evidence shRNA knockdown and Tks4-null MEFs with rescue by WT and phospho-mutant constructs, ECM degradation assays, immunofluorescence for MT1-MMP recruitment

    PMID:19144821

    Open questions at the time
    • Identity of the kinase-specific phosphotyrosine sites required for each downstream function not fully mapped
    • Mechanism by which SH3PXD2B recruits MT1-MMP to podosomes not defined at the structural level
    • Relative contributions of the PX domain versus SH3 domains to podosome targeting not dissected
  2. 2009 Medium

    Identification of ADAM15 as a binding partner of the fourth SH3 domain extended the podosome scaffold model to include transmembrane metalloproteinases beyond MT1-MMP.

    Evidence Co-immunoprecipitation and SH3 domain pulldown in Src-transfected fibroblasts

    PMID:19669234

    Open questions at the time
    • Functional consequence of the SH3PXD2B–ADAM15 interaction on ECM degradation not tested
    • No reciprocal validation or endogenous co-IP reported
    • Whether ADAM15 localizes to podosomes in an SH3PXD2B-dependent manner is untested
  3. 2010 High

    Linking SH3PXD2B loss-of-function to Frank-Ter Haar syndrome established a direct developmental requirement for podosome-mediated ECM remodeling in skeletal, cardiac, and ocular morphogenesis.

    Evidence Homozygosity mapping and sequencing in multiple FTHS families identifying five homozygous mutations; Tks4-null mice recapitulating FTHS phenotypes

    PMID:20137777

    Open questions at the time
    • Cell-type-specific contributions of SH3PXD2B to each affected organ system not resolved
    • Whether residual podosome function from TKS5 (SH3PXD2A) partially compensates in FTHS patients is unknown
  4. 2011 Medium

    Demonstrating that SH3PXD2B complexes with both Src and cortactin and is required for EGF-induced lamellipodia broadened its role from a podosome-restricted scaffold to a general actin-based protrusion regulator.

    Evidence Reciprocal co-immunoprecipitation of SH3PXD2B with Src and cortactin; siRNA knockdown with lamellipodia formation and cell spreading assays

    PMID:21886807

    Open questions at the time
    • Whether SH3PXD2B directly bridges Src to cortactin or forms separate binary complexes is unresolved
    • Signaling intermediates between EGF receptor and SH3PXD2B activation not identified
  5. 2020 Medium

    Zebrafish sh3pxd2b mutants revealed that SH3PXD2B-dependent podosome function is specifically required for collagen remodeling and fibrosis prevention, acting in a pathway distinct from MMP14.

    Evidence sh3pxd2b loss-of-function zebrafish (pretzel) with histological fibrosis analysis and phenotypic comparison to mmp14a/b knockouts

    PMID:33234702

    Open questions at the time
    • Molecular basis for the distinct spatiotemporal requirements of SH3PXD2B versus MMP14 in ECM remodeling is undefined
    • Whether fibrosis arises from failed collagen turnover or aberrant collagen deposition is not distinguished
    • Rescue experiments with mammalian SH3PXD2B in zebrafish not performed

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include the structural basis of SH3PXD2B scaffold assembly at podosomes, the full inventory of SH3 domain-dependent interactors, and how SH3PXD2B coordinates with TKS5 to regulate invadopodia versus podosomes in different cell types.
  • No high-resolution structural data for SH3PXD2B or its domain complexes
  • Functional redundancy versus division of labor with TKS5/SH3PXD2A not systematically tested
  • Role in cancer cell invasion established only at preprint level without peer-reviewed validation

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2
Localization
GO:0005886 plasma membrane 3 GO:0005856 cytoskeleton 2
Pathway
R-HSA-1474244 Extracellular matrix organization 2 R-HSA-162582 Signal Transduction 2

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2009 Tks4 (SH3PXD2B) is tyrosine phosphorylated by Src and localizes to rosettes of podosomes in Src-transformed fibroblasts; loss of Tks4 results in incomplete podosome formation, inhibited ECM degradation, and failure to recruit MT1-MMP to podosomes. Tyrosine phosphorylation sites of Tks4 are required for efficient rescue of both phenotypes. shRNA knockdown, mouse embryo fibroblasts from Tks4-null mice, rescue experiments with wild-type and phosphorylation-site mutants, ECM degradation assay, immunofluorescence localization Molecular biology of the cell High 19144821
2009 SH3PXD2B localizes to podosomes in Src-transfected fibroblasts and, through its last (fourth) SH3 domain, associates with ADAM15, a transmembrane member of the ADAM metalloproteinase family. Immunofluorescence localization in Src-transfected fibroblasts; co-immunoprecipitation/pulldown demonstrating SH3 domain-mediated interaction with ADAM15 Mammalian genome Medium 19669234
2011 SH3PXD2B forms a complex with Src (is phosphorylated by Src) and forms a complex with cortactin via the C-terminal region of cortactin; SH3PXD2B co-localizes with cortactin to Src-induced podosomes, EGF-induced membrane ruffles, and lamellipodia. Loss of SH3PXD2B inhibits EGF-induced lamellipodia/membrane ruffle formation and reduces cell spreading. Co-immunoprecipitation of SH3PXD2B with Src and cortactin, immunofluorescence co-localization, siRNA knockdown with phenotypic readout (cell spreading and lamellipodia formation assays) PloS one Medium 21886807
2010 Loss-of-function mutations in SH3PXD2B (encoding the TKS4 podosome adaptor protein) cause Frank-Ter Haar syndrome, establishing TKS4's essential role in embryonic skeletal, cardiovascular, and ocular development through its podosome/invadopodia function. Homozygosity mapping, sequencing of SH3PXD2B in FTHS families, identification of five homozygous mutations; phenotypic analysis of Tks4-null mice recapitulating FTHS features American journal of human genetics High 20137777
2020 Loss of sh3pxd2b in zebrafish (pretzel mutant) causes dermal and musculoskeletal fibrosis rather than the severe skeletal abnormalities seen in mmp14a/b knockouts, indicating that SH3PXD2B-dependent podosome function is specifically required for collagen/ECM remodeling and prevention of fibrosis, and that sh3pxd2b and mmp14 act in distinct spatiotemporal contexts for ECM remodeling. sh3pxd2b loss-of-function zebrafish mutant (pretzel) with histological analysis of fibrosis; comparison to mmp14a/b knockout zebrafish by genetic epistasis/phenotypic analysis Biology open Medium 33234702
2024 Mass spectrometry pulldown identified interacting partners of SH3PXD2B relevant to cell migration; SH3PXD2B knockdown inhibited breast cancer and lung cancer cell migration, and its upregulation promoted migration, implicating the SH3 domains in driving epithelial-to-mesenchymal transition. Mass spectrometry pulldown of SH3PXD2B interactors, immunoblotting validation, immunofluorescence, shRNA knockdown and overexpression with migration assay, in vivo bioluminescent IVIS metastasis imaging bioRxivpreprint Low bio_10.1101_2024.10.16.618596

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2009 The novel adaptor protein Tks4 (SH3PXD2B) is required for functional podosome formation. Molecular biology of the cell 153 19144821
2010 Disruption of the podosome adaptor protein TKS4 (SH3PXD2B) causes the skeletal dysplasia, eye, and cardiac abnormalities of Frank-Ter Haar Syndrome. American journal of human genetics 82 20137777
2011 Anterior segment dysgenesis and early-onset glaucoma in nee mice with mutation of Sh3pxd2b. Investigative ophthalmology & visual science 52 21282566
2009 The podosomal-adaptor protein SH3PXD2B is essential for normal postnatal development. Mammalian genome : official journal of the International Mammalian Genome Society 47 19669234
2011 The homolog of the five SH3-domain protein (HOFI/SH3PXD2B) regulates lamellipodia formation and cell spreading. PloS one 34 21886807
2013 Mutations in SH3PXD2B cause Borrone dermato-cardio-skeletal syndrome. European journal of human genetics : EJHG 30 24105366
2011 Sh3pxd2b mice are a model for craniofacial dysmorphology and otitis media. PloS one 29 21818352
2017 Identification of two novel SH3PXD2B gene mutations in Frank-Ter Haar syndrome by exome sequencing: Case report and review of the literature. Gene 16 28694206
2012 Localization of SH3PXD2B in human eyes and detection of rare variants in patients with anterior segment diseases and glaucoma. Molecular vision 10 22509100
2023 Comprehensive bioinformatics and experimental analysis of SH3PXD2B reveals its carcinogenic effect in gastric carcinoma. Life sciences 5 37211344
2024 Identification of a novel SH3PXD2B::FER fusion in a case of plexiform myofibroblastic tumor and review of the literature. Genes, chromosomes & cancer 4 39660974
2022 The Role of the Disrupted Podosome Adaptor Protein (SH3PXD2B) in Frank-Ter Haar Syndrome. Genes 4 35205281
2020 The novel zebrafish model pretzel demonstrates a central role for SH3PXD2B in defective collagen remodelling and fibrosis in Frank-Ter Haar syndrome. Biology open 2 33234702