Affinage

SFN

14-3-3 protein sigma · UniProt P31947

Round 2 corrected
Length
248 aa
Mass
27.8 kDa
Annotated
2026-04-28
57 papers in source corpus 9 papers cited in narrative 9 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SFN (14-3-3σ/Stratifin) is a p53-inducible scaffold protein that enforces cell-cycle checkpoints and modulates cytoskeletal signaling by sequestering phosphorylated client proteins in the cytoplasm. Upon DNA damage, p53-driven transcription upregulates SFN, which sequesters the cyclin B1–Cdc2 complex in the cytoplasm to prevent mitotic entry; loss of both SFN alleles causes mitotic catastrophe, establishing it as essential for the G2/M DNA-damage checkpoint (PMID:9659898, PMID:10524633). SFN also binds and inhibits cyclin–CDK2 complexes to restrain S-phase entry and proliferation, and is itself targeted for proteasomal degradation by the RING-finger E3 ligase Efp, linking its turnover to estrogen-receptor signaling in breast cancer (PMID:10767298, PMID:12075357). Beyond cell-cycle control, SFN engages a broad phospho-dependent interactome that includes cytoskeletal regulators such as AKAP-Lbc (suppressing Rho activation), LIMK2/Cofilin (promoting actin remodeling), and MYH9 (promoting renal fibrosis), positioning it as a versatile adaptor coupling mitogenic and cytoskeletal pathways (PMID:15324660, PMID:37946061, PMID:38986830).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 1997 High

    Identifying SFN as a p53-responsive gene that arrests cells at G2/M answered how the p53 checkpoint reaches the mitotic machinery and established a direct transcriptional link between DNA damage and cell-cycle inhibition.

    Evidence Quantitative expression profiling in irradiated colorectal cancer cells, reporter assays mapping a p53-responsive element, overexpression causing G2 arrest

    PMID:9659898

    Open questions at the time
    • Direct binding partner through which G2 arrest is achieved was not identified
    • Relevance outside colorectal cancer cells untested
  2. 1999 High

    Somatic knockout revealed that SFN is essential for G2/M checkpoint maintenance by sequestering cyclin B1–Cdc2 in the cytoplasm, resolving the molecular mechanism of the arrest first observed in 1997 and showing that loss leads to mitotic catastrophe.

    Evidence Both-allele knockout in HCT116 cells, subcellular fractionation of cyclin B1 and Cdc2, cell-cycle and viability analysis

    PMID:10524633

    Open questions at the time
    • Phospho-dependent binding site on Cdc2 or cyclin B1 not mapped
    • Whether other 14-3-3 isoforms compensate partially was not resolved
  3. 2000 High

    Demonstration that SFN also binds and inhibits cyclin–CDK2 complexes extended its checkpoint role from G2/M into G1/S control and showed it can suppress anchorage-independent growth, broadening its tumor-suppressive function.

    Evidence Co-immunoprecipitation of SFN with cyclin–CDK2 in vitro and in vivo, CDK kinase assays, soft-agar colony formation in breast cancer lines

    PMID:10767298

    Open questions at the time
    • Specific phosphosite(s) mediating the SFN–cyclin-CDK2 interaction not mapped
    • Relative contribution of CDK2 inhibition versus Cdc2 sequestration to growth arrest unclear
  4. 2002 High

    Identification of the RING-finger E3 ligase Efp as the enzyme targeting SFN for proteasomal degradation explained how SFN protein levels are kept low in proliferating cells and connected SFN turnover to estrogen-receptor signaling in breast cancer.

    Evidence In vitro ubiquitin ligase assay, Efp knockout MEFs, antisense knockdown, xenograft model

    PMID:12075357

    Open questions at the time
    • Ubiquitylation site(s) on SFN not determined
    • Whether Efp-mediated degradation is p53-dependent or independent not tested
  5. 2004 High

    Proteomic cataloguing of ~200 14-3-3-associated proteins revealed a large cytoskeletal-regulatory clientele and defined a specific mechanism — phospho-dependent binding to AKAP-Lbc suppressing Rho activation — establishing SFN-family members as general adaptors linking kinase signaling to cytoskeletal remodeling.

    Evidence Mass spectrometry interactome in HEK293 cells, hierarchical clustering, PKA-dependent phosphosite validation, in vivo Rho activation assay

    PMID:15324660

    Open questions at the time
    • Contribution of the sigma isoform versus other 14-3-3 paralogs was not distinguished
    • Functional consequences for cell morphology not quantified at single-cell level
  6. 2012 Medium

    Discovery of the SFN–SPARC complex in keratinocyte-conditioned media and its regulation of type I collagen synthesis in fibroblasts extended SFN function to extracellular matrix homeostasis and implicated it in dermal fibrosis.

    Evidence Co-immunoprecipitation from conditioned media, MS identification, 3D modeling, immunoblot in normal vs. fibrotic tissue

    PMID:22422640

    Open questions at the time
    • Binding interface and stoichiometry of SFN–SPARC complex undefined
    • Whether SFN acts intracellularly before secretion or extracellularly not resolved
    • Single-lab observation not independently replicated
  7. 2023 Medium

    Placing SFN upstream of LIMK2/Cofilin phosphorylation in cervical cancer cells provided a defined signaling axis through which SFN promotes actin remodeling, invasion, and migration, revealing a pro-tumorigenic role distinct from its classical tumor-suppressive checkpoint function.

    Evidence SFN overexpression and silencing, transwell/scratch assays, actin-tracker staining, Western blot for LIMK2/p-LIMK2/Cofilin/p-Cofilin

    PMID:37946061

    Open questions at the time
    • Whether SFN directly binds LIMK2 or acts via an intermediary is unknown
    • Applicability beyond cervical cancer cells not tested
    • Single-lab study
  8. 2024 Medium

    Identification of MYH9 as a cytoplasmic binding partner of SFN in renal tubular cells, with SFN knockdown alleviating fibrosis in a UUO model, provided in vivo evidence that the SFN–MYH9 axis drives organ fibrosis beyond the skin.

    Evidence LC-MS/MS interactome, co-IP, immunofluorescence co-localization, siRNA knockdown, UUO mouse model

    PMID:38986830

    Open questions at the time
    • Mechanism by which SFN binding maintains MYH9 expression/stability not defined
    • Whether the pro-fibrotic role involves canonical 14-3-3 phospho-binding unknown
    • Single-lab study

Open questions

Synthesis pass · forward-looking unresolved questions
  • A unifying structural and biophysical model explaining how SFN selectively engages its diverse clients — checkpoint kinases, cytoskeletal regulators, and extracellular matrix modulators — and how isoform-specific features distinguish it from other 14-3-3 paralogs remains to be established.
  • No crystal structure of SFN bound to a client phosphopeptide has been reported in this timeline
  • Isoform-specific residues conferring client selectivity are unmapped
  • Relative contribution of SFN's tumor-suppressive vs. pro-fibrotic/pro-invasive functions in vivo is unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 6 GO:0098772 molecular function regulator activity 3
Localization
GO:0005829 cytosol 2 GO:0005576 extracellular region 1
Pathway
R-HSA-1640170 Cell Cycle 3 R-HSA-162582 Signal Transduction 2 R-HSA-5357801 Programmed Cell Death 2 R-HSA-73894 DNA Repair 2

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1997 14-3-3sigma (SFN) is a p53-regulated inhibitor of G2/M progression. It is strongly induced by gamma irradiation and DNA-damaging agents via a p53-responsive element 1.8 kb upstream of its transcription start site. Exogenous introduction of 14-3-3sigma into cycling cells results in G2 arrest, functionally analogous to fission yeast rad24/rad25. Quantitative gene expression analysis in CRC cell lines, reporter assays identifying p53-responsive element, exogenous overexpression with cell cycle analysis Molecular cell High 9659898
1999 14-3-3sigma (SFN) is required to maintain G2/M arrest after DNA damage by sequestering cyclin B1 and Cdc2 in the cytoplasm, preventing their nuclear entry. Knockout of both 14-3-3sigma alleles in human colorectal cancer cells leads to mitotic catastrophe upon DNA damage, demonstrating its essential role in the DNA damage checkpoint. Human somatic-cell knockout (both alleles inactivated), cell cycle analysis, subcellular fractionation of cyclin B1 and Cdc2 Nature High 10524633
2000 14-3-3sigma (SFN) associates with cyclin-CDK2 complexes in vitro and in vivo via shared cyclin-CDK2 binding motifs. Overexpression of 14-3-3sigma inhibits cyclin-CDK activity, blocks cell cycle entry, inhibits cell proliferation, and prevents anchorage-independent growth in breast cancer cell lines. Expression cloning via CDK2 association, co-immunoprecipitation in vitro and in vivo, cell proliferation and anchorage-independent growth assays The Journal of biological chemistry High 10767298
2002 Efp, an estrogen-receptor alpha target gene product and RING-finger E3 ubiquitin ligase, targets 14-3-3sigma (SFN) for proteolysis. This Efp-mediated degradation of 14-3-3sigma promotes breast tumor cell proliferation; loss of Efp results in accumulation of 14-3-3sigma and reduced cell growth. Ubiquitin ligase assay (RING-finger-dependent), in vivo mouse xenograft model, antisense knockdown, mouse embryonic fibroblast knockout analysis Nature High 12075357
2004 14-3-3 proteins (including SFN/14-3-3sigma) associate with approximately 170 unique proteins in HEK293 cells, with a large subset regulating cytoskeletal architecture. 14-3-3 binding to AKAP-Lbc (a RhoGEF) via a phospho-dependent site (induced by PKA) suppresses Rho activation in vivo, defining a mechanism by which 14-3-3 proteins control cell morphology and membrane dynamics. Mass spectrometry of 14-3-3-associated proteins, domain-based hierarchical clustering, tandem proteomic and biochemical validation, in vivo Rho activation assay Current biology : CB High 15324660
2005 14-3-3sigma (SFN) is a member of the 14-3-3 protein family that interacts with over 200 target proteins via phosphoserine-dependent and phosphoserine-independent mechanisms, regulating cell cycle, cell growth, differentiation, survival, apoptosis, migration and spreading. Its expression is regulated by p53 upon DNA damage and by epigenetic deregulation (CpG methylation silencing found in multiple human cancer types). Review consolidating multiple experimental studies; methylation analysis Cell research Medium 15857577
2012 SFN (14-3-3sigma/stratifin) forms a complex with SPARC in keratinocyte-conditioned media, as determined by co-immunoprecipitation and 3D modeling. This SPARC/SFN complex controls type I collagen synthesis and expression in fibroblasts, and both proteins are differentially expressed between normal and fibrotic tissue, implicating this interaction in regulation of matrix deposition and prevention of dermal fibrotic conditions. Protein purification from keratinocyte-conditioned media, mass spectrometry identification, co-immunoprecipitation, 3D structural modeling, immunoblot in fibrotic tissues Journal of cellular biochemistry Medium 22422640
2023 SFN (Stratifin) regulates cervical cancer cell invasion, migration, cytoskeletal remodeling, proliferation, and apoptosis through the LIMK2/Cofilin signaling pathway. SFN overexpression upregulates LIMK2, p-LIMK2, Cofilin, and p-Cofilin, while SFN silencing has opposite effects, placing SFN upstream of LIMK2/Cofilin in this pathway. SFN overexpression and silencing cellular models, transwell and scratch assays, flow cytometry, EdU staining, Actin-Tracker cytoskeletal staining, Western blotting, immunofluorescence Molecular biotechnology Medium 37946061
2024 SFN (Stratifin) promotes renal fibrosis in chronic kidney disease by physically binding to MYH9 (non-muscle myosin heavy chain 9) in the cytoplasm of renal tubular epithelial cells. SFN knockdown reduces MYH9 expression and alleviates fibrosis markers Col-1 and α-SMA both in TGF-β1-injured cells and in a UUO mouse model. LC-MS/MS interactome, co-immunoprecipitation, immunofluorescence co-localization, siRNA knockdown in vitro, UUO mouse model in vivo European journal of pharmacology Medium 38986830

Source papers

Stage 0 corpus · 57 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2005 Towards a proteome-scale map of the human protein-protein interaction network. Nature 2090 16189514
2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America 1479 12477932
2006 A probability-based approach for high-throughput protein phosphorylation analysis and site localization. Nature biotechnology 1336 16964243
2016 ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure. Cell 1233 26777405
2015 The BioPlex Network: A Systematic Exploration of the Human Interactome. Cell 1118 26186194
2017 Architecture of the human interactome defines protein communities and disease networks. Nature 1085 28514442
1997 14-3-3sigma is a p53-regulated inhibitor of G2/M progression. Molecular cell 1081 9659898
2015 A human interactome in three quantitative dimensions organized by stoichiometries and abundances. Cell 1015 26496610
2014 A proteome-scale map of the human interactome network. Cell 977 25416956
2020 A reference map of the human binary protein interactome. Nature 849 32296183
1999 14-3-3Sigma is required to prevent mitotic catastrophe after DNA damage. Nature 773 10524633
2021 Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell 705 33961781
2011 Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in bioinformatics 656 21873635
2008 Large-scale proteomics and phosphoproteomics of urinary exosomes. Journal of the American Society of Nephrology : JASN 607 19056867
2004 Protein kinases C and D mediate agonist-dependent cardiac hypertrophy through nuclear export of histone deacetylase 5. Molecular and cellular biology 445 15367659
2004 The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome research 438 15489334
2022 OpenCell: Endogenous tagging for the cartography of human cellular organization. Science (New York, N.Y.) 432 35271311
2006 CaM kinase II selectively signals to histone deacetylase 4 during cardiomyocyte hypertrophy. The Journal of clinical investigation 430 16767219
2010 Global analysis of TDP-43 interacting proteins reveals strong association with RNA splicing and translation machinery. Journal of proteome research 422 20020773
2015 Panorama of ancient metazoan macromolecular complexes. Nature 407 26344197
2004 Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. Current biology : CB 386 15324660
2015 Aerobic glycolysis tunes YAP/TAZ transcriptional activity. The EMBO journal 362 25796446
2002 Efp targets 14-3-3 sigma for proteolysis and promotes breast tumour growth. Nature 322 12075357
2014 Unbiased screen for interactors of leucine-rich repeat kinase 2 supports a common pathway for sporadic and familial Parkinson disease. Proceedings of the National Academy of Sciences of the United States of America 296 24510904
2005 Prohibitin is required for Ras-induced Raf-MEK-ERK activation and epithelial cell migration. Nature cell biology 296 16041367
2012 USP4 is regulated by AKT phosphorylation and directly deubiquitylates TGF-β type I receptor. Nature cell biology 277 22706160
2012 A high-throughput approach for measuring temporal changes in the interactome. Nature methods 273 22863883
2000 Association of the cyclin-dependent kinases and 14-3-3 sigma negatively regulates cell cycle progression. The Journal of biological chemistry 264 10767298
2022 Tau interactome maps synaptic and mitochondrial processes associated with neurodegeneration. Cell 256 35063084
2005 14-3-3 proteins--an update. Cell research 253 15857577
2016 Simultaneous Targeting of Bladder Tumor Growth, Survival, and Epithelial-to-Mesenchymal Transition with a Novel Therapeutic Combination of Acetazolamide (AZ) and Sulforaphane (SFN). Targeted oncology 44 26453055
2005 Mutation analysis of FANCD2, BRIP1/BACH1, LMO4 and SFN in familial breast cancer. Breast cancer research : BCR 41 16280053
2011 Proteomic analysis of psoriatic skin tissue for identification of differentially expressed proteins: up-regulation of GSTP1, SFN and PRDX2 in psoriatic skin. International journal of molecular medicine 40 21805023
2019 LINC01128 expedites cervical cancer progression by regulating miR-383-5p/SFN axis. BMC cancer 31 31779593
2017 In vitro Biological Effects of Sulforaphane (SFN), Epigallocatechin-3-gallate (EGCG), and Curcumin on Breast Cancer Cells: A Systematic Review of the Literature. Nutrition and cancer 31 28872903
2017 Novel sulforaphane-enabled self-microemulsifying delivery systems (SFN-SMEDDS) of taxanes: Formulation development and in vitro cytotoxicity against breast cancer cells. International journal of pharmaceutics 27 29195916
2016 Hormetic Potential of Sulforaphane (SFN) in Switching Cells' Fate Towards Survival or Death. Mini reviews in medicinal chemistry 27 26586127
2010 Outcome prediction and risk assessment by quantitative pyrosequencing methylation analysis of the SFN gene in advanced stage, high-risk, neuroblastic tumor patients. International journal of cancer 25 19626586
2019 Crucifera sulforaphane (SFN) inhibits the growth of nasopharyngeal carcinoma through DNA methyltransferase 1 (DNMT1)/Wnt inhibitory factor 1 (WIF1) axis. Phytomedicine : international journal of phytotherapy and phytopharmacology 23 31394414
2019 H19/miR-675-5p Targeting SFN Enhances the Invasion and Metastasis of Nasalpharyngeal Cancer Cells. Current molecular pharmacology 19 31677258
2020 The promyelocytic leukemia protein isoform PML1 is an oncoprotein and a direct target of the antioxidant sulforaphane (SFN). Biochimica et biophysica acta. Molecular cell research 17 32243901
2017 SFN-SIQ, SFNSL and skin biopsy of 55 cases with small fibre involvement. The International journal of neuroscience 15 29077516
2023 Stratifin (SFN) Regulates Cervical Cancer Cell Proliferation, Apoptosis, and Cytoskeletal Remodeling and Metastasis Progression Through LIMK2/Cofilin Signaling. Molecular biotechnology 11 37946061
2012 SPARC/SFN interaction, suppresses type I collagen in dermal fibroblasts. Journal of cellular biochemistry 11 22422640
2023 Knockdown of lncRNA SNHG16 Attenuates the Proliferation and Radioresistance of Nasopharyngeal Carcinoma Cells by Mediating miR-31-5p/SFN Axis. Radiation research 10 36520963
2022 Quantitative Expression of SFN, lncRNA CCDC18-AS1, and lncRNA LINC01343 in Human Breast Cancer as the Regulator Biomarkers in a Novel ceRNA Network: Based on Bioinformatics and Experimental Analyses. Genetics research 10 36160032
2007 DNA methylation patterns of the CDH1, RARB, and SFN genes in choroid plexus tumors. Cancer genetics and cytogenetics 10 18036402
2022 SFN Enhanced the Radiosensitivity of Cervical Cancer Cells via Activating LATS2 and Blocking Rad51/MDC1 Recruitment to DNA Damage Site. Cancers 8 35454780
2019 Promoter-associated DNA methylation & expression profiling of genes (FLT 3, EPB41L3 & SFN) in patients with oral squamous cell carcinoma in the Khasi & Jaintia population of Meghalaya, India. The Indian journal of medical research 7 32048621
2019 Carcinogen-induced tumors in SFN-transgenic mice harbor a characteristic mutation spectrum of human lung adenocarcinoma. Cancer science 5 31144406
2018 DNA methylation patterns of the S100A14, POU2F3 and SFN genes in equine sarcoid tissues. Research in veterinary science 5 30086514
2024 Antidepressant effects of sulforaphane (SFN) and its derivatives SLL-III-9 and SLL-III-120 and their potential underlying mechanisms based on the microbiota-gut-brain axis. Food & function 4 39370907
2018 The Mitochondrial Genes BAK1, FIS1 and SFN are Linked with Alterations in Mitochondrial Membrane Potential in Barrett's Esophagus. International journal of molecular sciences 4 30404157
2016 Low BIK outside-inside-out interactive inflammation immune-induced transcription-dependent apoptosis through FUT3-PMM2-SQSTM1-SFN-ZNF384. Immunologic research 4 26423071
2020 Multiple omics analysis of the protective effects of SFN on estrogen-dependent breast cancer cells. Molecular biology reports 3 32342433
2024 SFN promotes renal fibrosis via binding with MYH9 in chronic kidney disease. European journal of pharmacology 2 38986830
2015 On the formation of SFn (-) (n = 1-6) anions via a novel route and their properties. Rapid communications in mass spectrometry : RCM 1 26405793