Affinage

RAB8B

Ras-related protein Rab-8B · UniProt Q92930

Length
207 aa
Mass
23.6 kDa
Annotated
2026-06-10
12 papers in source corpus 10 papers cited in narrative 10 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RAB8B is a small Rab GTPase that controls multiple vesicular trafficking steps at the plasma membrane and secretory/endosomal pathways (PMID:24035388, PMID:24213529, PMID:11278749). It acts redundantly with RAB8A to mediate apical, but not basolateral, transport in polarized cells in vivo, where double knockout disrupts apical marker localization; additional loss of Rab10 in this background impairs ciliogenesis (PMID:24213529). RAB8B engages effectors in a guanine-nucleotide-dependent manner: it binds the TPR-domain protein TRIP8b through its GTP-bound state to stimulate regulated cAMP-induced ACTH secretion (PMID:11278749). It is also required for caveolin-dependent endocytosis of LRP6, thereby promoting Wnt/β-catenin signaling and induction of Wnt target genes (PMID:24035388). RAB8B further participates in trans-Golgi trafficking at cochlear ribbon synapses through interaction with the deafness protein otoferlin (PMID:18772196). In hepatocytes, RAB8B supports autophagosome/lysosome formation and lipophagy and is a direct target of LXRα-induced let-7a and miR-34a microRNAs (PMID:32557804).

Mechanistic history

Synthesis pass · year-by-year structured walk · 10 steps
  1. 2001 High

    Established the first RAB8B effector and a functional role, showing that RAB8B couples to the secretory machinery through a nucleotide-state-dependent interaction.

    Evidence Yeast two-hybrid, in vitro binding, co-IP with GTP/GDP-binding mutants, and ACTH secretion assay in AtT20 cells

    PMID:11278749

    Open questions at the time
    • Mechanism by which TRIP8b stimulates secretion downstream of RAB8B is not resolved
    • Endogenous vesicle population controlled by the RAB8B–TRIP8b complex not defined
  2. 2003 Low

    Linked RAB8B expression to junction assembly and cytoskeletal networks in the testis, but without direct perturbation of RAB8B.

    Evidence RT-PCR, immunohistochemistry, cytoskeletal co-fractionation, and germ cell co-culture in primary rat Sertoli cells

    PMID:12639940

    Open questions at the time
    • Correlative expression data only; no loss-of-function for RAB8B
    • Causal role in adherens junction assembly not established
  3. 2008 Medium

    Identified otoferlin as a RAB8B partner, placing RAB8B in trans-Golgi trafficking at cochlear ribbon synapses.

    Evidence Yeast two-hybrid (cochlear cDNA library), co-localization in HEK293, and reciprocal co-IP of native cochlear proteins

    PMID:18772196

    Open questions at the time
    • Functional consequence of the RAB8B–otoferlin interaction for hair cell secretion untested
    • Single lab; no in vivo RAB8B perturbation in the cochlea
  4. 2008 Low

    Characterized molecular determinants of the TRIP8b TPR domain that govern RAB8B binding specificity.

    Evidence In vitro binding assays and interface mutagenesis comparing TRIP8b and Pex5p

    PMID:18346465

    Open questions at the time
    • No cellular functional readout for RAB8B in this study
    • Physiological relevance of binding-affinity changes not tested
  5. 2013 High

    Demonstrated that RAB8B is required for caveolar endocytosis of LRP6 and for Wnt/β-catenin signal activation, defining a receptor-internalization role.

    Evidence RNAi screen, siRNA depletion, overexpression rescue, β-catenin and Wnt target gene assays, and Xenopus/zebrafish morphant models

    PMID:24035388

    Open questions at the time
    • Whether RAB8B acts directly on caveolar carriers or via an effector is unresolved
    • Generality across Wnt receptor types not defined
  6. 2013 High

    Established functional redundancy of RAB8B with RAB8A in apical transport in vivo and a combinatorial role with Rab10 in ciliogenesis.

    Evidence Rab8b-KO and Rab8a/Rab8b double-KO mice, apical/basolateral marker immunofluorescence, Rab10 knockdown, and cilia frequency analysis

    PMID:24213529

    Open questions at the time
    • Specific cargo and effectors mediating apical delivery not identified
    • Non-redundant RAB8B-specific functions not separated from RAB8A
  7. 2016 Medium

    Showed RAB8B routes West Nile virus particles from recycling endosomes to the plasma membrane for egress.

    Evidence RNAi knockdown, viral release quantification, and co-localization with recycling endosome markers

    PMID:26817838

    Open questions at the time
    • Direct interaction with viral components not shown
    • Effector linking RAB8B to recycling-endosome exocytosis unknown
  8. 2021 Medium

    Placed RAB8B under transcriptional/microRNA control by LXRα and tied its activity to autophagy and lipid metabolism in hepatocytes.

    Evidence LXRα-KO mice, ChIP, 3′UTR luciferase reporter, miRNA transfection, autophagy flux, and oxygen consumption assays

    PMID:32557804

    Open questions at the time
    • Molecular step by which RAB8B promotes autophagosome/lysosome formation not defined
    • Single lab; effectors in lipophagy unidentified
  9. 2025 Low

    Implicated a PFKM–RAB8B axis in exosome release and chemoresistance in lung adenocarcinoma.

    Evidence Metabolomics, RAB8B expression modulation, exosome characterization, and apoptosis/glycolysis assays in chemoresistant LUAD cells

    PMID:42057963

    Open questions at the time
    • No direct PFKM–RAB8B binding or reconstitution shown
    • Mechanism connecting RAB8B to exosome biogenesis undefined
  10. 2026 Low

    Suggested RAB8B modulates VAMP-3 clustering and trafficking to support SARS-CoV-2 infection.

    Evidence Molecular dynamics simulations and siRNA silencing in SARS-CoV-2-infected CaCo-2 cells with infection quantification

    PMID:42015392

    Open questions at the time
    • Direct control of VAMP-3 by RAB8B not mechanistically demonstrated
    • Computational predictions not validated by binding data

Open questions

Synthesis pass · forward-looking unresolved questions
  • The full set of RAB8B-specific GEFs, GAPs, and effectors that distinguish its functions from RAB8A across distinct trafficking routes remains undefined.
  • No structural model of RAB8B effector complexes
  • RAB8B-specific (non-redundant) cargo not catalogued
  • Regulatory GEF/GAP network unmapped

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003924 GTPase activity 2
Localization
GO:0005886 plasma membrane 2 GO:0005768 endosome 1 GO:0005794 Golgi apparatus 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 4 R-HSA-162582 Signal Transduction 1 R-HSA-9612973 Autophagy 1

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 RAB8B is required for caveolar (caveolin-dependent) endocytosis of LRP6 and for Wnt/β-catenin signaling; RAB8B depletion reduces LRP6 activity, β-catenin accumulation, and induction of Wnt target genes, whereas RAB8B overexpression promotes LRP6 activity and internalization and rescues inhibition of caveolar endocytosis. RNAi screen, loss-of-function (siRNA depletion), gain-of-function (overexpression), β-catenin accumulation assay, Wnt target gene induction, Xenopus and zebrafish morphant models Cell reports High 24035388
2013 Rab8a and Rab8b are functionally redundant and together are essential for apical (but not basolateral/dendritic) transport in vivo; double-knockout mice show mislocalisation of apical markers and die earlier than Rab8a single-knockouts. Neither Rab8a nor Rab8b alone is required for ciliogenesis, but additional loss of Rab10 in the double-knockout greatly reduces the percentage of ciliated cells. Rab8b-knockout mouse generation, Rab8a/Rab8b double-knockout mouse, immunofluorescence of apical/basolateral markers, Rab10 siRNA knockdown in double-KO cells, cilia morphology/frequency analysis Journal of cell science High 24213529
2001 Rab8b interacts with TRIP8b (a TPR-domain protein) in a guanine-nucleotide-dependent but prenylation-independent manner; both Rab8b and TRIP8b stimulate cAMP-induced ACTH secretion from AtT20 cells, implicating them in the regulated secretory pathway. Yeast two-hybrid screen, in vitro binding assay, co-immunoprecipitation, Rab8b GTP/GDP-binding mutants, stable cell lines, ACTH secretion assay The Journal of biological chemistry High 11278749
2008 Rab8b GTPase physically interacts with otoferlin (the DFNB9 deafness protein) as identified by yeast two-hybrid screen in cochlear cDNA library, confirmed by co-localization in HEK293 cells and co-immunoprecipitation of both tagged and native proteins from cochlea, suggesting Rab8b participates in trans-Golgi trafficking at ribbon synapses. Yeast two-hybrid screen (cochlear cDNA library), transient co-expression and co-localization in HEK293 cells, co-immunoprecipitation (tagged and native proteins from cochlea) Human molecular genetics Medium 18772196
2016 Rab8b regulates intracellular trafficking of West Nile virus particles from recycling endosomes to the plasma membrane for secretion; RNAi-mediated depletion of Rab8b significantly decreases WNV particle release and causes accumulation of WNV particles in recycling endosomes. RNAi knockdown of Rab8b, quantification of WNV particles in supernatant vs. wild-type cells, co-localization of Rab8 and WNV antigen by immunofluorescence, recycling endosome marker analysis The Journal of biological chemistry Medium 26817838
2003 Rab8B localises to the basal compartment of the testis, co-distributes with E-cadherin, associates with actin, intermediate filament, and microtubule cytoskeletal networks, and its expression increases during adherens junction assembly in Sertoli cells and in response to germ cell co-culture or germ cell-conditioned medium. RT-PCR, immunohistochemistry, co-fractionation with cytoskeletal networks, high-density Sertoli cell culture, germ cell co-culture, conditioned medium experiments, pharmacological disruption of junction integrity in adult rats Endocrinology Low 12639940
2008 The TPR domain of TRIP8b (originally identified as a Rab8b-interacting protein) has distinct but overlapping substrate specificities compared with the peroxisomal receptor Pex5p; changes in surrounding residues or conformational state of binding partners profoundly alter TRIP8b–Rab8b binding activity. In vitro binding assays comparing TPR-domain proteins with Rab8b and PTS1 peptides, mutagenesis of binding interfaces Biochimica et biophysica acta Low 18346465
2021 LXRα activation suppresses RAB8B expression in hepatocytes by transcriptionally inducing let-7a and miR-34a microRNAs, which directly inhibit RAB8B (confirmed by 3′UTR luciferase assay); reduced RAB8B impairs autophagosome/lysosome formation, blocks lipophagy, and reduces mitochondrial fuel oxidation. LXRα knockout mice on high-fat diet, chromatin immunoprecipitation (LXRα at let-7a/miR-34a promoters), 3′UTR luciferase reporter assay for RAB8B, miRNA transfection, autophagy flux assays, mitochondrial oxygen consumption rate measurement Hepatology Medium 32557804
2025 PFKM (phosphofructokinase muscle isoform) promotes chemoresistance in lung adenocarcinoma by upregulating RAB8B expression, which in turn regulates exosome release; the PFKM–RAB8B axis modulates apoptosis and glycolytic metabolism in drug-resistant cells. Targeted metabolomics, correlation of PFKM activity with exosome release, RAB8B expression modulation, exosome characterization, apoptosis and glycolysis assays in chemoresistant LUAD cells Journal of pharmaceutical analysis Low 42057963
2026 RAB8B modulates VAMP-3 clustering and intracellular trafficking in SARS-CoV-2-infected cells; silencing of RAB8B reduced viral infection by 30–76% in CaCo-2 cells. Molecular dynamics simulations, in vitro siRNA silencing of Rab8b in SARS-CoV-2-infected CaCo-2 cells, VAMP-3 clustering assay, viral infection quantification Journal of medical virology Low 42015392

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 Rab8a and Rab8b are essential for several apical transport pathways but insufficient for ciliogenesis. Journal of cell science 108 24213529
2013 RAB8B is required for activity and caveolar endocytosis of LRP6. Cell reports 55 24035388
2003 Rab8B GTPase and junction dynamics in the testis. Endocrinology 55 12639940
2011 Trafficking and gating of hyperpolarization-activated cyclic nucleotide-gated channels are regulated by interaction with tetratricopeptide repeat-containing Rab8b-interacting protein (TRIP8b) and cyclic AMP at distinct sites. The Journal of biological chemistry 54 21504900
2001 Rab8b and its interacting partner TRIP8b are involved in regulated secretion in AtT20 cells. The Journal of biological chemistry 53 11278749
2008 Rab8b GTPase, a protein transport regulator, is an interacting partner of otoferlin, defective in a human autosomal recessive deafness form. Human molecular genetics 43 18772196
2021 Liver X Receptor Alpha Activation Inhibits Autophagy and Lipophagy in Hepatocytes by Dysregulating Autophagy-Related 4B Cysteine Peptidase and Rab-8B, Reducing Mitochondrial Fuel Oxidation. Hepatology (Baltimore, Md.) 38 32557804
2016 Rab8b Regulates Transport of West Nile Virus Particles from Recycling Endosomes. The Journal of biological chemistry 31 26817838
2008 Comparison of the PTS1- and Rab8b-binding properties of Pex5p and Pex5Rp/TRIP8b. Biochimica et biophysica acta 19 18346465
2020 FGF2 Affects Parkinson's Disease-Associated Molecular Networks Through Exosomal Rab8b/Rab31. Frontiers in genetics 16 33101391
2026 Multiorgan Molecular Landscape of Severe COVID-19 Revealed by Consensus Gene Signatures and RAB8B Targeting. Journal of medical virology 0 42015392
2025 PFKM promotes chemoresistance in lung adenocarcinoma by regulating RAB8B mediated exosome release. Journal of pharmaceutical analysis 0 42057963

Missed literature

Know a paper Affinage missed for RAB8B? Flag it for the maintainers and the community.

No submissions yet.