Affinage

RAB8B

Ras-related protein Rab-8B · UniProt Q92930

Length
207 aa
Mass
23.6 kDa
Annotated
2026-04-28
12 papers in source corpus 9 papers cited in narrative 10 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RAB8B is a small Rab GTPase that functions redundantly with RAB8A to direct apical membrane trafficking and, together with RAB10, supports ciliogenesis (PMID:24213529). It promotes caveolin-dependent endocytosis of LRP6 to sustain Wnt/β-catenin signalling (PMID:24035388), mediates recycling-endosome-to-plasma-membrane transport exploited by West Nile virus and SARS-CoV-2 (PMID:26817838, PMID:42015392), and participates in regulated secretion through a guanine-nucleotide-dependent interaction with the TPR-domain protein TRIP8b (PMID:11278749). RAB8B expression in hepatocytes is post-transcriptionally suppressed by LXRα-induced miR-34a and let-7a, and its depletion impairs autophagosome–lysosome formation and lipophagy, contributing to hepatic steatosis (PMID:32557804).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2001 High

    Identification of a guanine-nucleotide-dependent RAB8B–TRIP8b interaction established RAB8B as a participant in regulated secretion, answering whether this GTPase has effectors beyond constitutive traffic.

    Evidence Yeast two-hybrid, in vitro binding, co-IP, and ACTH secretion assays in AtT20 cells

    PMID:11278749

    Open questions at the time
    • Structural basis of TRIP8b TPR–RAB8B recognition not resolved at atomic level
    • Whether TRIP8b interaction is required for secretion in non-pituitary cell types unknown
    • Downstream effectors linking RAB8B–TRIP8b to vesicle fusion machinery not identified
  2. 2003 Medium

    Localization of RAB8B to adherens junctions and cytoskeletal networks in the testis suggested a role in junction dynamics, extending RAB8B function beyond classical secretory trafficking.

    Evidence Immunohistochemistry, cytoskeletal co-sedimentation, and Sertoli–germ cell co-cultures

    PMID:12639940

    Open questions at the time
    • No loss-of-function experiment performed to confirm a causal role in junction assembly
    • Mechanism linking RAB8B to cytoskeletal association not defined
    • Relevance to adherens junction dynamics in other epithelia untested
  3. 2008 Medium

    Discovery of a physical RAB8B–otoferlin interaction at the trans-Golgi network in cochlear tissue connected RAB8B to auditory hair-cell vesicle trafficking and the DFNB9 deafness pathway, while biochemical dissection of the TRIP8b TPR domain clarified nucleotide-dependent binding specificity.

    Evidence Yeast two-hybrid, co-IP of native cochlear proteins, co-localization in HEK293 (otoferlin); in vitro mutagenesis and binding assays (TRIP8b TPR)

    PMID:18346465 PMID:18772196

    Open questions at the time
    • No functional rescue to demonstrate that RAB8B–otoferlin interaction is required for synaptic vesicle exocytosis
    • Whether RAB8B loss phenocopies hearing defects in vivo not tested
    • Crystal structure of RAB8B–TRIP8b complex unavailable
  4. 2013 High

    Genetic knockout studies resolved the long-standing question of RAB8A/RAB8B redundancy, demonstrating that both isoforms are collectively essential for apical—but not basolateral—trafficking, and revealed an additional redundancy with RAB10 in ciliogenesis.

    Evidence Rab8a/Rab8b single- and double-knockout mice with immunofluorescence; additional Rab10 siRNA in DKO cells

    PMID:24213529

    Open questions at the time
    • Molecular cargo or adaptor distinguishing apical from basolateral sorting by RAB8 isoforms not identified
    • Tissue-specific phenotypes of double KO beyond intestinal epithelia and kidney not fully catalogued
    • Mechanism by which RAB10 compensates for RAB8 loss in ciliogenesis unknown
  5. 2013 High

    Demonstrating that RAB8B promotes caveolin-dependent LRP6 endocytosis connected it to Wnt/β-catenin signal transduction, showing RAB8B can regulate signalling pathway output through receptor trafficking.

    Evidence RNAi screen, knockdown/overexpression, LRP6 phosphorylation and β-catenin assays, Xenopus and zebrafish morphants

    PMID:24035388

    Open questions at the time
    • Whether RAB8B acts directly on caveolae or indirectly through recycling endosome intermediates unclear
    • Identity of RAB8B effectors mediating LRP6 internalization not determined
    • Relevance to non-canonical Wnt pathways not addressed
  6. 2016 Medium

    Showing that RAB8B is required for recycling-endosome-to-plasma-membrane transport of West Nile virus particles defined the specific intracellular trafficking step controlled by RAB8B that is co-opted by viral egress.

    Evidence siRNA knockdown with quantification of WNV release and immunofluorescence co-localization in neuroblastoma cells

    PMID:26817838

    Open questions at the time
    • Whether RAB8B acts via VAMP-3 or other SNAREs in WNV egress not determined
    • Contribution of RAB8A redundancy not fully controlled
    • Applicability to other flaviviruses not tested
  7. 2021 High

    Identification of LXRα–miR-34a/let-7a as a transcriptional–post-transcriptional axis that suppresses RAB8B revealed how metabolic signalling regulates autophagy and lipophagy through RAB8B abundance in hepatocytes.

    Evidence LXRα KO mouse, ChIP, 3′ UTR luciferase reporter, autophagy flux and mitochondrial respiration assays

    PMID:32557804

    Open questions at the time
    • Direct autophagosome/lysosome fusion step requiring RAB8B not molecularly defined
    • Whether RAB8B overexpression alone rescues steatosis in vivo not shown
    • Other Rab GTPases potentially co-regulated by the same miRNAs not characterized
  8. 2026 Medium

    Extending the viral-hijacking paradigm to SARS-CoV-2 showed that RAB8B modulates VAMP-3 clustering and intracellular trafficking during coronavirus infection, establishing RAB8B as a broadly exploited host factor.

    Evidence siRNA silencing in SARS-CoV-2-infected CaCo-2 cells with viral infection quantification and molecular dynamics simulations

    PMID:42015392

    Open questions at the time
    • Direct RAB8B–VAMP-3 physical interaction not confirmed by co-IP or pull-down
    • Relative contribution of RAB8A versus RAB8B in coronavirus trafficking not delineated
    • Mechanism by which SARS-CoV-2 specifically engages RAB8B not identified

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include the identity of RAB8B-specific effectors and GEFs that distinguish it from RAB8A, the structural basis of its interaction with TRIP8b and otoferlin, and whether RAB8B loss causes developmental or auditory phenotypes in vivo.
  • No RAB8B-specific GEF or GAP identified
  • Atomic-resolution structure of RAB8B with any effector unavailable
  • In vivo auditory phenotype of RAB8B single knockout not reported

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003924 GTPase activity 4
Localization
GO:0005886 plasma membrane 2 GO:0031410 cytoplasmic vesicle 2 GO:0005794 Golgi apparatus 1 GO:0005856 cytoskeleton 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 5 R-HSA-162582 Signal Transduction 1 R-HSA-1852241 Organelle biogenesis and maintenance 1 R-HSA-9612973 Autophagy 1

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 RAB8B (along with RAB8A) is essential for apical transport in vivo; Rab8a/Rab8b double-knockout mice show mislocalisation of apical markers (accumulating in three intracellular patterns) while basolateral/dendritic transport is unaffected, demonstrating functional redundancy between the two isoforms for apical trafficking. Rab8b-knockout and Rab8a/Rab8b double-knockout mouse models with immunofluorescence localisation of apical and basolateral markers Journal of cell science High 24213529
2013 Simultaneous loss of Rab8a and Rab8b has little effect on ciliogenesis, but additional knockdown of Rab10 in double-knockout cells greatly reduces the percentage of ciliated cells, placing Rab8a/Rab8b and Rab10 in a partly redundant pathway controlling ciliogenesis. Rab8a/Rab8b double-knockout mice combined with siRNA knockdown of Rab10; quantification of ciliated cell frequency Journal of cell science High 24213529
2013 RAB8B is required for caveolin-dependent endocytosis of LRP6 and for Wnt/β-catenin signalling; RAB8B depletion reduces LRP6 activity, β-catenin accumulation, and Wnt target gene induction, whereas RAB8B overexpression promotes LRP6 internalization and rescues inhibition of caveolar endocytosis. RNAi screen followed by RAB8B knockdown/overexpression assays measuring LRP6 phosphorylation, β-catenin levels, target gene expression, and endocytosis; validated in Xenopus and zebrafish morphants Cell reports High 24035388
2001 RAB8B interacts directly with TRIP8b (a TPR-domain protein); the interaction requires a guanine nucleotide but not prenylation of Rab8b, and both proteins stimulate cAMP-induced ACTH secretion from AtT20 cells, placing them in the regulated secretory pathway. Yeast two-hybrid screen, in vitro binding assay, co-immunoprecipitation, Rab8b mutant analysis, stable cell lines measuring ACTH release The Journal of biological chemistry High 11278749
2003 RAB8B localises to the basal compartment of the testis at sites of adherens junctions and associates with actin, intermediate filament, and microtubule cytoskeletal networks; its expression increases during junction assembly and is reduced concomitant with germ-cell loss, implicating it in adherens junction dynamics. Immunohistochemistry, cytoskeletal co-sedimentation/association assays, RT-PCR, high-density Sertoli cell cultures and germ-cell co-cultures, drug treatment model (ADJM) Endocrinology Medium 12639940
2008 RAB8B physically interacts with otoferlin (mutated in DFNB9 deafness) as identified by yeast two-hybrid and confirmed by co-immunoprecipitation of native cochlear proteins and co-localisation in HEK293 cells, suggesting RAB8B participates in trans-Golgi trafficking in cochlear hair cells. Yeast two-hybrid screen, co-expression and co-localisation in HEK293 cells, co-immunoprecipitation of native cochlear proteins Human molecular genetics Medium 18772196
2016 RAB8B is required for trafficking of West Nile virus (WNV) particles from recycling endosomes to the plasma membrane; Rab8b knockdown significantly decreases WNV particle release and causes accumulation of viral particles in recycling endosomes. RNAi knockdown, quantification of WNV particles in supernatant, immunofluorescence co-localisation of WNV antigen with Rab8 in neuroblastoma cells The Journal of biological chemistry Medium 26817838
2021 LXRα suppresses RAB8B expression in hepatocytes by transcriptionally inducing let-7a and miR-34a microRNAs that directly target the Rab8b 3′ UTR; reduced RAB8B impairs autophagosome/lysosome formation and lipophagy, contributing to hepatic steatosis. LXRα KO mouse, chromatin immunoprecipitation (ChIP) for let-7a/miR-34a promoters, 3′ UTR luciferase reporter assay, autophagy flux assays, mitochondrial oxygen consumption rate measurement Hepatology High 32557804
2008 The TPR domain of TRIP8b (the RAB8B-interacting partner) has distinct but overlapping substrate specificities compared to the related PTS1 receptor Pex5p; the conformational/nucleotide state of Rab8b alters binding affinity, and surrounding residues modulate recognition by the TPR domain. In vitro binding assays with purified proteins, mutagenesis of TPR domain and Rab8b variants, comparison with Pex5p Biochimica et biophysica acta Medium 18346465
2026 RAB8B modulates VAMP-3 clustering and intracellular trafficking in SARS-CoV-2-infected cells; silencing of Rab8b reduced viral infection by 30–76%, identifying RAB8B as a host factor hijacked during coronavirus infection. Molecular dynamics simulations, in vitro siRNA silencing assays in SARS-CoV-2-infected CaCo-2 cells with quantification of viral infection Journal of medical virology Medium 42015392

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 Rab8a and Rab8b are essential for several apical transport pathways but insufficient for ciliogenesis. Journal of cell science 108 24213529
2003 Rab8B GTPase and junction dynamics in the testis. Endocrinology 55 12639940
2013 RAB8B is required for activity and caveolar endocytosis of LRP6. Cell reports 54 24035388
2011 Trafficking and gating of hyperpolarization-activated cyclic nucleotide-gated channels are regulated by interaction with tetratricopeptide repeat-containing Rab8b-interacting protein (TRIP8b) and cyclic AMP at distinct sites. The Journal of biological chemistry 54 21504900
2001 Rab8b and its interacting partner TRIP8b are involved in regulated secretion in AtT20 cells. The Journal of biological chemistry 53 11278749
2008 Rab8b GTPase, a protein transport regulator, is an interacting partner of otoferlin, defective in a human autosomal recessive deafness form. Human molecular genetics 43 18772196
2021 Liver X Receptor Alpha Activation Inhibits Autophagy and Lipophagy in Hepatocytes by Dysregulating Autophagy-Related 4B Cysteine Peptidase and Rab-8B, Reducing Mitochondrial Fuel Oxidation. Hepatology (Baltimore, Md.) 36 32557804
2016 Rab8b Regulates Transport of West Nile Virus Particles from Recycling Endosomes. The Journal of biological chemistry 30 26817838
2008 Comparison of the PTS1- and Rab8b-binding properties of Pex5p and Pex5Rp/TRIP8b. Biochimica et biophysica acta 19 18346465
2020 FGF2 Affects Parkinson's Disease-Associated Molecular Networks Through Exosomal Rab8b/Rab31. Frontiers in genetics 16 33101391
2021 Arabidopsis RAB8A, RAB8B and RAB8D Proteins Interact with Several RTNLB Proteins and are Involved in the Agrobacterium tumefaciens Infection Process. Plant & cell physiology 9 34255832
2026 Multiorgan Molecular Landscape of Severe COVID-19 Revealed by Consensus Gene Signatures and RAB8B Targeting. Journal of medical virology 0 42015392