Affinage

PARD6A

Partitioning defective 6 homolog alpha · UniProt Q9NPB6

Length
346 aa
Mass
37.4 kDa
Annotated
2026-06-10
10 papers in source corpus 10 papers cited in narrative 10 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PARD6A (Par6alpha) is a scaffold polarity protein that organizes aPKC-containing complexes to coordinate centrosome positioning, cytoskeletal dynamics, and polarized cell migration (PMID:15475953, PMID:23264737). It binds atypical PKC directly through its PB1 domain, and this Par6alpha/aPKC module phosphorylates Akt1 at Thr34 to restrain insulin-induced Akt1 activation and glycogen synthesis (PMID:17335965), and partitions Lgl1 into a Par6alpha-aPKCzeta complex at the leading edge of migrating cells, where aPKCzeta phosphorylation of Lgl1 blocks its association with non-muscle myosin IIA (PMID:24213535). Par6alpha is recruited to the centrosome through interactions with Par6gamma and with the microtubule-binding protein Hook2, which binds the aPKC-binding domain of Par6alpha; from the centrosome it controls recruitment of components such as p150(Glued) to govern ciliogenesis, microtubule organization, and centrosome reorientation during migration (PMID:23264737, PMID:27624926). In cancer, Par6alpha couples PKCiota to Rac1 activation: the PKCiota-Par6alpha complex retains the Rho GEF Ect2 in the cytoplasm and induces MMP-10 to drive transformed, anchorage-independent growth and invasion, with Par6alpha mutants unable to bind PKCiota or couple to Rac1 failing to support transformation (PMID:19617897, PMID:18427549). PARD6A further promotes epithelial-mesenchymal transition and metastasis through integrin beta1-ILK-SNAIL1 signaling and through induction of the downstream effector Serpina3 (PMID:35379775, PMID:39300216).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2004 Medium

    Established that Par6alpha acts upstream of centrosomal cytoskeletal organization, linking a polarity protein to centrosome positioning during directed cell migration.

    Evidence Live imaging of cytoskeletal dynamics and centrosome positioning following mPar6alpha overexpression in glial-guided migrating neurons

    PMID:15475953

    Open questions at the time
    • Based on overexpression, leaving endogenous requirement undefined
    • Molecular partners mediating the centrosomal effect not identified here
  2. 2007 Medium

    Defined a direct PB1-domain interaction between Par6alpha and aPKC and showed the complex acts as a kinase scaffold that negatively regulates Akt1 signaling.

    Evidence Deletion mutagenesis (DeltaPB1, T34A-Akt1), phosphorylation assay, and glycogen synthesis reconstitution in C2C12 myoblasts

    PMID:17335965

    Open questions at the time
    • Performed in overexpression context
    • Physiological setting of Akt1 inhibition by Par6alpha/aPKC not established beyond myoblasts
  3. 2008 High

    Showed Par6alpha is a required adaptor coupling PKCiota to Rac1 activation and MMP-10 induction, establishing it as an effector node in oncogenic transformation.

    Evidence RNAi knockdown with domain-mutant rescue (K19A, DeltaCRIB) and in vivo subcutaneous tumor assays in NSCLC cells

    PMID:18427549

    Open questions at the time
    • Mechanism by which the complex activates Rac1 not fully resolved at this stage
    • Generality beyond NSCLC unknown
  4. 2009 Medium

    Identified Ect2 as the GEF physically bound by the PKCiota-Par6alpha complex, explaining how the complex activates Rac1 by retaining Ect2 in the cytoplasm.

    Evidence Reciprocal Co-IP, RNAi of PKCiota/Par6alpha/Ect2, Rac1 activity assays, and subcellular localization in NSCLC cells

    PMID:19617897

    Open questions at the time
    • Structural basis of the Ect2 interaction not defined
    • How cytoplasmic retention triggers Rac1 GEF activity not detailed
  5. 2012 Medium

    Placed Par6alpha downstream of Par6gamma for centrosomal targeting and showed Par6alpha controls centrosomal protein recruitment affecting ciliogenesis and centrosome reorientation.

    Evidence siRNA depletion of Par6gamma, Co-IP with Par6alpha, and immunofluorescence of centrosomal composition

    PMID:23264737

    Open questions at the time
    • Direct vs indirect Par6gamma-Par6alpha association not distinguished
    • Mechanism of p150(Glued) recruitment unresolved
  6. 2013 Medium

    Resolved how Par6alpha-aPKCzeta and Lgl1 act at the leading edge, showing aPKCzeta phosphorylation of Lgl1 switches it away from NMII-A binding.

    Evidence Co-IP, in vitro binding and filament assembly assays, phosphorylation assays, and localization in migrating cells

    PMID:24213535

    Open questions at the time
    • Functional consequence of the Lgl1 switch for migration not quantified
    • Competition dynamics in vivo not measured
  7. 2016 Medium

    Identified Hook2 as a centrosomal recruitment factor that binds the aPKC-binding domain of Par6alpha, providing a physical mechanism for Par6alpha centrosomal localization during migration.

    Evidence Co-IP, domain mapping, and siRNA depletion of Hook2 with immunofluorescence of centrosomal PAR6alpha

    PMID:27624926

    Open questions at the time
    • Competition between Hook2 and aPKC for the same Par6alpha domain not resolved
    • Relationship to the Par6gamma recruitment pathway unclear
  8. 2022 Medium

    Extended Par6alpha's oncogenic role to EMT, defining an integrin beta1-ILK-SNAIL1 axis driving metastasis in ovarian cancer.

    Evidence siRNA/overexpression of PARD6A with epistasis to SNAIL1/ILK and in vitro and in vivo metastasis assays

    PMID:35379775

    Open questions at the time
    • Direct molecular link between Par6alpha and integrin beta1-ILK not defined
    • Whether this acts through aPKC scaffolding unknown
  9. 2024 Medium

    Identified Serpina3 as a transcriptional/downstream effector through which PARD6A drives lung adenocarcinoma proliferation and invasion.

    Evidence PARD6A knockdown/overexpression with RNA-seq, Serpina3 rescue/silencing epistasis, and subcutaneous tumor model

    PMID:39300216

    Open questions at the time
    • Mechanism connecting PARD6A to Serpina3 induction not defined
    • Whether Serpina3 axis intersects the PKCiota-Rac1 pathway unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • How Par6alpha's polarity-scaffolding activity (aPKC/Lgl1/centrosome) is mechanistically reconciled with its distinct oncogenic outputs (Rac1-MMP-10, EMT-SNAIL1, Serpina3) within a single regulatory framework remains unresolved.
  • No unifying structural or regulatory model linking polarity and oncogenic functions
  • Endogenous physiological role in normal tissue largely uncharacterized
  • Upstream signals controlling complex assembly not defined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 3 GO:0098772 molecular function regulator activity 3
Localization
GO:0005815 microtubule organizing center 3 GO:0005856 cytoskeleton 2 GO:0005829 cytosol 1
Pathway
R-HSA-1643685 Disease 3 R-HSA-162582 Signal Transduction 2
Complex memberships
Lgl1-Par6alpha-aPKCzeta complexPKCiota-Par6alpha-Ect2 complexPar6alpha-aPKC complex

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 Overexpression of mPar6alpha disrupts the perinuclear tubulin cage, retargets PKCzeta and gamma-tubulin away from the centrosome, and inhibits centrosomal motion and neuronal migration along glial fibers, indicating Par6alpha mediates signaling that coordinates cytoskeletal dynamics at the centrosome during glial-guided neuronal migration. Live imaging of cytoskeletal dynamics in migrating neurons; overexpression of mPar6alpha with readout of centrosome positioning, tubulin cage integrity, and neuronal migration Nature neuroscience Medium 15475953
2009 In NSCLC cells, Ect2 (a Rho GEF) is mislocalized to the cytoplasm where it physically binds the PKCiota-Par6alpha complex; knockdown of either PKCiota or Par6alpha causes Ect2 to redistribute to the nucleus. This PKCiota-Par6alpha-Ect2 complex activates Rac1, driving transformed growth and invasion. RNA interference knockdown of PKCiota, Par6alpha, and Ect2; co-immunoprecipitation of complex; Rac1 activity assays; subcellular localization by immunofluorescence Oncogene Medium 19617897
2008 PKCiota activates Rac1 in NSCLC cells through a PKCiota-Par6alpha complex that drives anchorage-independent growth and invasion via induction of MMP-10 expression. Par6alpha mutants unable to bind PKCiota (K19A) or couple to Rac1 (DeltaCRIB) fail to restore transformation and MMP-10 expression in Par6alpha-deficient cells. RNAi knockdown of PKCiota, Par6alpha, Rac1, and MMP-10; rescue with wild-type and domain mutants of Par6alpha; in vitro and in vivo (subcutaneous tumor) assays Oncogene High 18427549
2013 Lgl1 forms two distinct complexes in vivo: Lgl1-NMII-A and Lgl1-Par6alpha-aPKCzeta. Phosphorylation of Lgl1 by aPKCzeta prevents its interaction with NMII-A and affects its cellular localization. The Lgl1-Par6alpha-aPKCzeta complex localizes to the leading edge of migrating cells, and aPKCzeta and NMII-A compete to bind the same domain of Lgl1. Co-immunoprecipitation; in vitro binding and filament assembly assays; phosphorylation assays; immunofluorescence localization in migrating cells Journal of cell science Medium 24213535
2012 Par6gamma depletion causes loss of Par6alpha from the centrosome; Par6alpha in turn controls centrosomal protein recruitment through p150(Glued), affecting ciliogenesis, microtubule organization, and centrosome reorientation during migration. Par6gamma was shown to associate with Par6alpha. Par6gamma depletion (siRNA); immunofluorescence for centrosomal protein composition; co-immunoprecipitation of Par6gamma with Par6alpha Journal of cell science Medium 23264737
2016 Hook2 (a microtubule-binding protein) interacts with PAR6alpha via its C-terminal domain binding the aPKC-binding domain of PAR6alpha, and this interaction localizes PAR6alpha to the centrosome during polarized cell migration. Depletion of Hook2 reduces PAR6alpha at the centrosome; overexpression of Hook2 recruits PAR6alpha, aPKC, and PAR3 to aggresomes. Co-immunoprecipitation; siRNA depletion of Hook2; immunofluorescence of centrosomal PAR6alpha; domain mapping Scientific reports Medium 27624926
2007 Par6alpha interacts directly with aPKC (via its PB1 domain), and the Par6alpha/aPKC complex inhibits insulin-induced Akt1 activation by aPKC-mediated phosphorylation of Akt1 at Thr34. A DeltaPB1-Par6alpha mutant that cannot bind aPKC does not inhibit Akt1 activation; T34A-Akt1 is resistant to Par6alpha/aPKC-mediated inhibition and restores insulin-induced glycogen synthesis. Deletion mutagenesis; overexpression in C2C12 myoblasts; phosphorylation assay on Akt1 T34; glycogen synthesis reconstitution Molecular and cellular endocrinology Medium 17335965
2022 PARD6A promotes EMT in ovarian cancer cells via integrin beta1-ILK-SNAIL1 signaling, modulating E-cadherin and vimentin expression. PARD6A knockdown suppressed and overexpression promoted EMT and metastasis in vitro and in vivo. siRNA knockdown and overexpression of PARD6A; knockdown/overexpression of SNAIL1 and ILK; in vitro migration/invasion assays; in vivo metastasis model Cell death & disease Medium 35379775
2024 PARD6A promotes lung adenocarcinoma cell proliferation, migration, and invasion through induction of Serpina3; ectopic Serpina3 expression rescues defects caused by PARD6A knockdown, and Serpina3 silencing impedes the enhanced phenotype caused by PARD6A overexpression. PARD6A knockdown and overexpression; RNA-seq to identify downstream targets; Serpina3 rescue and knockdown experiments; in vitro proliferation/migration/invasion assays; subcutaneous tumor mouse model Cancer gene therapy Medium 39300216
2017 Par6alpha is necessary for neuronal differentiation of bone marrow mesenchymal stem cells; siRNA silencing of Par6alpha impairs MSC-to-neuron-like cell differentiation. Let-7f-5p directly targets Par6alpha mRNA (validated by luciferase reporter assay), and downregulation of let-7f-5p during differentiation increases Par6alpha expression. siRNA knockdown of Par6alpha; luciferase reporter assay for let-7f-5p targeting; gain- and loss-of-function of let-7f-5p Biochemical and biophysical research communications Low 29155179

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2004 Par6alpha signaling controls glial-guided neuronal migration. Nature neuroscience 240 15475953
2009 Ect2 links the PKCiota-Par6alpha complex to Rac1 activation and cellular transformation. Oncogene 119 19617897
2008 Matrix metalloproteinase-10 is a critical effector of protein kinase Ciota-Par6alpha-mediated lung cancer. Oncogene 80 18427549
2013 The tumor suppressor Lgl1 forms discrete complexes with NMII-A and Par6α-aPKCζ that are affected by Lgl1 phosphorylation. Journal of cell science 29 24213535
2022 Partitioning defective 6 homolog alpha (PARD6A) promotes epithelial-mesenchymal transition via integrin β1-ILK-SNAIL1 pathway in ovarian cancer. Cell death & disease 21 35379775
2012 Par6γ is at the mother centriole and controls centrosomal protein composition through a Par6α-dependent pathway. Journal of cell science 19 23264737
2016 Hook2, a microtubule-binding protein, interacts with Par6α and controls centrosome orientation during polarized cell migration. Scientific reports 15 27624926
2007 The Par6alpha/aPKC complex regulates Akt1 activity by phosphorylating Thr34 in the PH-domain. Molecular and cellular endocrinology 11 17335965
2017 MicroRNA let-7f-5p regulates neuronal differentiation of rat bone marrow mesenchymal stem cells by targeting Par6α. Biochemical and biophysical research communications 10 29155179
2024 PARD6A promotes lung adenocarcinoma cell proliferation and invasion through Serpina3. Cancer gene therapy 1 39300216

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