| 2006 |
Human PAICS forms a homo-octamer with an octameric carboxylase core and four peripheral dimers formed by the synthetase domains. Each AIRc active site is formed by structural elements from three AIRc domains, demonstrating that the octamer is essential for carboxylation activity. Four tunnel systems connecting the AIRc and SAICARs active sites were identified, suggesting intermediate (CAIR) channeling between the two active sites. |
X-ray crystallography (crystal structure at 2.8 Å resolution); functional complementation analyses to identify active sites |
Journal of molecular biology |
High |
17224163
|
| 2009 |
Zebrafish paics encodes a bifunctional enzyme catalyzing steps 6 and 7 of IMP synthesis; loss-of-function causes pigmentation defects (absent xanthophore/iridophore pigment, reduced melanin) and microphthalmia due to defects in cell cycle exit of retinoblasts. Genetic epistasis showed pigmentation defects depend on GTP synthesis pathway deficiency and microphthalmia on ATP synthesis pathway deficiency, placing paics at a bifurcation point in purine biosynthesis affecting two independent downstream pathways. |
Zebrafish recessive mutant analysis; maternal-zygotic and maternal-effect mutant analysis; genetic epistasis with separable ATP/GTP pathway outputs; purine supplementation rescue |
Development (Cambridge, England) |
High |
19570845
|
| 1995 |
The chicken GPAT (PPAT) and AIRC (PAICS) genes are divergently transcribed from a ~230 bp intergenic bidirectional promoter. An initiator-like element overlapping the AIRC transcription start site plays a central role in coordinating expression of both genes; removal of GC/CCAAT boxes from the AIRC proximal half disrupts bidirectional transcription. |
Deletion mutagenesis in a bireporter vector transfected into HepG2 and chicken LMH cells; gel retardation, DNase I, and methylation interference assays with HeLa nuclear proteins |
The Journal of biological chemistry |
Medium |
7836476
|
| 1997 |
NRF-1 and Sp1 bind to a cluster of sites (nt 215–260) in the human GPAT-AIRC bidirectional promoter; NRF-1 is required for stable Sp1 binding at this locus, and point mutations in the NRF-1 site or flanking Sp1 sites decrease expression of both GPAT and AIRC (PAICS) in transfected HepG2 cells. |
Promoter deletion and point-mutation analysis in transfected HepG2 cells; gel retardation assays identifying NRF-1 and Sp1 binding |
Nucleic acids research |
Medium |
9108165
|
| 1988 |
The bovine PAIS (PAICS) gene is syntenic with PRGS (PPAT) and SOD1, mapping to cattle syntenic group U10, which is conserved with human chromosome 21; this synteny was established by somatic cell hybrid complementation requiring bovine PAIS for growth on selective media. |
Somatic cell genetics with cow-hamster hybrid cell lines; enzyme electrophoresis for biochemical marker concordance |
Biochemical genetics |
Medium |
3377762
|
| 2019 |
A homozygous missense mutation p.Lys53Arg in PAICS reduces the catalytic activity of the enzyme to ~10% in patient fibroblasts and ~25% in recombinant purified protein compared to wild-type, establishing a direct catalytic deficiency. The mutation also prevents purinosome formation in patient fibroblasts, which was rescued by transfection with wild-type but not mutant PAICS. |
Enzyme activity assay in patient skin fibroblasts and recombinant E. coli-expressed protein; purinosome formation assessed by transfection rescue |
Human molecular genetics |
High |
31600779
|
| 2020 |
Crystal structures of human PAICS in complex with native ligands revealed CAIR bound in both AIRc and SAICARs active sites and SAICAR bound in the SAICARs domain, as well as a structure with SAICAR and an ATP analog in the SAICARs active site. These structures define the architecture of both active sites and substrate/product binding modes. |
X-ray crystallography of PAICS complexes with native substrates and ATP analog |
The Journal of biological chemistry |
High |
32571877
|
| 2020 |
PAICS knockdown is required for growth and survival of prostate cancer cells, as demonstrated by clonogenic survival and cell viability assays. |
Gene knockdown with clonogenic survival and cell viability assays in prostate cancer cell lines |
The Journal of biological chemistry |
Medium |
32571877
|
| 2022 |
PAICS physically interacts with all other known de novo purine biosynthesis (DNPB) enzymes (except amidophosphoribosyltransferase/PPAT) and with MTHFD1, as demonstrated by bimolecular fluorescence complementation in live cells and co-immunoprecipitation of StrepTag-labeled PAICS reintegrated into PAICS-knockout HeLa cells. These interactions occur in both purine-depleted and purine-rich conditions. C-terminal tagging of PAICS disrupts these interactions and correlates with impaired DNPB activity and perturbed IMP partitioning into AMP and GMP. |
Bimolecular fluorescence complementation (BiFC) in live cells; Co-IP with StrepTag-labeled PAICS in CRISPR knockout HeLa cells; metabolic flux analysis of DNPB intermediates |
The Journal of biological chemistry |
High |
35331738
|
| 2022 |
Time-course mass spectrometric analysis of 13C-bicarbonate incorporation demonstrated that the SAICAR synthetase domain of PAICS selectively uses enzyme-generated CAIR over exogenously added CAIR, providing biochemical evidence for substrate channeling of CAIR between the two active sites of PAICS. |
Time-course mass spectrometry with 13C-bicarbonate isotope tracing using recombinant human PAICS |
Biochemistry |
High |
35285625
|
| 2022 |
Density functional theory calculations based on PAICS crystal structures elucidated the reaction mechanism: AIRc carboxylation proceeds in two steps (C-C bond formation forming isoCAIR, then deprotonation assisted by an active-site histidine); SAICARs phosphorylation of CAIR precedes condensation with aspartate; three active-site magnesium ions bind substrates and stabilize transition states. |
Quantum chemical (DFT) calculations using large active-site models built from crystal structures; barriers compared to experimental kinetic data |
Journal of the American Chemical Society |
Medium |
35914774
|
| 2023 |
K6-polyubiquitination of PAICS by the Cul5/ASB11-based ubiquitin E3 ligase recruits UBAP2 (a ubiquitin-binding protein with intrinsically disordered regions) to induce phase separation and drive purinosome assembly. ASB11 upregulation upon purinosome-inducing stress (via relief of H3K9me3/HP1α transcriptional silencing) triggers this cascade. In human melanoma, constitutive ASB11 overexpression drives purinosome formation supporting proliferation and tumorigenesis. |
Co-immunoprecipitation; ubiquitination assays; phase separation/condensate imaging; CRISPR/genetic manipulation; xenograft tumor model |
Molecular cell |
High |
37848033
|
| 2013 |
Crystal structure of invertebrate (Trichoplusia ni) PAICS at 2.8 Å resolution confirmed the bifunctional domain architecture is highly conserved across divergent species and provided insights into substrate binding; comparison with human and prokaryotic homologs revealed a conserved enzymatic framework. |
X-ray crystallography (SAD phasing) of insect PAICS; comparative structural analysis |
Proteins |
Medium |
23553965
|
| 2015 |
PAICS knockdown modulates pyruvate kinase activity, and PAICS expression is induced by L-glutamine. A glutamine antagonist (DON) blocked glutamine-mediated induction of PAICS and reduced pyruvate kinase activity, placing PAICS expression under metabolic regulation by glutamine in lung cancer cells. |
Gene knockdown and overexpression studies; pyruvate kinase activity assay; DON treatment; cell proliferation and invasion assays |
Oncotarget |
Medium |
26140362
|
| 2016 |
PAICS expression in prostate cancer is transcriptionally regulated by MYC; the BET bromodomain inhibitor JQ1 reduces PAICS expression and causes loss of MYC occupancy at the PAICS promoter. PAICS knockdown inhibits proliferation and invasion in prostate cancer cells in vitro and in vivo (CAM and xenograft models). |
BET inhibitor (JQ1) treatment; ChIP showing loss of MYC occupancy on PAICS promoter; siRNA/shRNA knockdown; CAM and murine xenograft models |
The Prostate |
Medium |
27550065
|
| 2018 |
PAICS expression is negatively regulated post-transcriptionally by miR-128, which binds the PAICS 3'-UTR. In bladder cancer cells, PAICS induces EMT by positively regulating SNAI1 and reducing E-cadherin expression. |
3'-UTR luciferase reporter assay; miR-128 overexpression; qRT-PCR and immunoblot for SNAI1 and E-cadherin; in vitro proliferation/invasion and in vivo CAM assays |
Neoplasia |
Medium |
30121007
|
| 2018 |
PAICS knockdown in breast cancer cells blocks G1-S cell cycle transition, suppresses Cyclin E, upregulates Cyclin D1, P21, and CDK4, and activates PARP and caspase-3 while downregulating Bcl-2 and Bcl-xl, inducing apoptosis. |
Lentiviral shRNA knockdown; flow cytometry for cell cycle analysis; Western blot for cell cycle and apoptosis markers |
Biological research |
Medium |
30097015
|
| 2020 |
In colorectal cancer cells, PAICS expression is transcriptionally activated by MYC (BET inhibitor JQ1 reduces PAICS expression) and negatively regulated by miR-128. PAICS knockdown upregulates E-cadherin (EMT marker) and reduces tumor growth and metastatic dissemination to liver, lungs, and bone in mice. |
JQ1 treatment; miR-128 overexpression; stable PAICS knockdown; murine xenograft and metastasis model with PET imaging |
Cancers |
Medium |
32218208
|
| 2020 |
PAICS interacts with HDAC1 and HDAC2 in gastric cancer cells; PAICS deficiency decreases RAD51 expression, impairs RAD51 recruitment to DNA damage sites by reducing HDAC1/2 deacetylase activity, and thereby prevents DNA damage repair, sensitizing cells to cisplatin. |
Co-immunoprecipitation (PAICS–HDAC1/HDAC2 interaction); RAD51 ChIP at damage sites; HDAC activity assay; cisplatin sensitivity assay in vitro and in vivo |
Cell death & disease |
Medium |
32632107
|
| 2022 |
PAICS promotes FAK phosphorylation in breast cancer cells; miR-4731-5p inhibits this by targeting PAICS mRNA. PAICS-dependent FAK phosphorylation drives glycolysis, EMT, migration, and invasion, defining a miR-4731-5p/PAICS/FAK signaling axis. |
Luciferase 3'-UTR reporter confirming miR-4731-5p targets PAICS; Western blot for FAK phosphorylation; functional assays for glycolysis and EMT; xenograft model |
Cell death discovery |
Medium |
35379785
|
| 2023 |
PAICS interacts with DYRK3 kinase and co-regulates purinosome formation in oral squamous cell carcinoma; disrupting PAICS inhibits purinosome formation and affects survival of radiation-resistant OSCC cells. The DYRK3/PAICS axis contributes to radiotherapy resistance. |
In vitro cell models of radiation-resistant OSCC; protein interaction assays; GSK-626616 (DYRK3 inhibitor); purinosome formation imaging; in vivo tumor model |
International journal of molecular sciences |
Low |
38139175
|
| 2025 |
ACSS2 directly interacts with PAICS and promotes its acetylation; acetylated PAICS undergoes autophagy-mediated degradation, limiting purine biosynthesis and reducing dNTP pools, which exacerbates cytoplasmic chromatin fragment accumulation and drives the senescence-associated secretory phenotype (SASP). |
Co-immunoprecipitation (ACSS2–PAICS interaction); acetylation assays; autophagy inhibition experiments; Acss2 pharmacological inhibition and deletion in mice; dNTP pool measurement; SASP marker analysis |
Nature communications |
Medium |
40021646
|
| 2025 |
In lung cancer cells, GART deletion inhibits the PAICS-Akt-β-catenin signaling pathway, suggesting GART acts upstream of PAICS to activate Akt-β-catenin and promote proliferation and migration. |
GART knockdown; qRT-PCR and Western blot for PAICS, p-Akt, and β-catenin; xenograft tumor model |
Frontiers in oncology |
Low |
40201340
|
| 2026 |
PAICS loss-of-function in zebrafish (paics knockout) recapitulates cerebellar neuronal loss, neuromuscular junction disruption, motor impairment, and widespread DNA damage repair defects including suppression of key DNA repair pathways. Restoring paics expression in C9orf72-deficient zebrafish resolves DNA damage and preserves Purkinje and Granule cells, identifying PAICS as a critical mediator of cerebellar neuronal survival downstream of C9orf72. |
Zebrafish paics knockout; single-cell transcriptomics; rescue by paics re-expression in C9orf72 zebrafish; DNA damage assays; neuromuscular junction and motor behavioral analysis |
Brain : a journal of neurology |
Medium |
41810938
|
| 2026 |
IRF4 transcriptionally activates PAICS in DLBCL cells; PAICS physically interacts with LDHA and augments its activity, skewing the NAD+/NADH balance toward metabolic immunosuppression (elevated TGF-β and IL-10, reduced IFN-γ, enhanced CD8+ T cell exhaustion). This defines an IRF4-PAICS-LDHA axis. |
Co-immunoprecipitation (PAICS–LDHA interaction); LDHA activity assay; ChIP or transcriptional assay for IRF4-PAICS; cytokine profiling; PAICS/LDHA knockdown with T cell co-culture assays; tumor model |
NPJ precision oncology |
Low |
41991742
|