Affinage

P4HA2

Prolyl 4-hydroxylase subunit alpha-2 · UniProt O15460

Length
535 aa
Mass
60.9 kDa
Annotated
2026-06-10
17 papers in source corpus 11 papers cited in narrative 12 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

P4HA2 encodes the catalytic α-subunit of collagen prolyl 4-hydroxylase isoenzyme II (C-P4H-II), an α2β2 tetrameric enzyme that converts proline residues in collagen chains to 4-hydroxyproline, a modification required for collagen triple-helix formation and thermal stability (PMID:26001784). Together with P4HA1, P4HA2 accounts entirely for prolyl 4-hydroxylation of type I collagen, as the remaining isoform P4HA3 cannot hydroxylate type I collagen (PMID:41999892); C-P4H-I can largely compensate for loss of C-P4H-II in endochondral bone development, but compound loss produces chondrodysplasia, reduced 4-hydroxyproline content, and biomechanically impaired matrix (PMID:26001784). P4HA2-dependent hydroxylation is required for normal extracellular matrix composition in vivo: loss of P4HA2 disrupts scleral and corneal collagen fibril arrangement, lowers collagen thermal stability, elevates fibronectin, reduces collagen I, and compromises visual acuity (PMID:41756678), and a loss-of-function missense variant that reduces P4HA2 expression and collagen hydroxylation underlies myopic axial elongation (PMID:29364500). Transcriptionally, P4HA2 is induced by HIF-1 under hypoxia (PMID:16877351) and by wild-type p53 (PMID:20504876), and is regulated downstream of an IGF-II→IGF1R/IR hybrid receptor→SOX9 profibrotic axis in lung fibroblasts (PMID:37510994). Beyond these collagen-modifying and regulatory roles, the broader signaling context captured here is limited to individual cell-type studies.

Mechanistic history

Synthesis pass · year-by-year structured walk · 12 steps
  1. 2006 Medium

    Established that P4HA2 is an oxygen-responsive gene, linking collagen post-translational modification capacity to hypoxic signaling.

    Evidence Primary human chondrocytes under 1% O2 with qPCR and pharmacological HIF-1 inhibition

    PMID:16877351

    Open questions at the time
    • No direct ChIP or promoter-binding evidence for HIF-1 occupancy
    • Pharmacological inhibitor may have off-target effects
    • Limited to chondrocytes
  2. 2007 Medium

    Placed P4HA2 upstream of HIF-1 in cardiac inflammatory signaling, indicating its loss can feed back into HIF-driven transcription with functional cardioprotective consequences.

    Evidence siRNA knockdown in HL-1 cardiomyocytes and murine ischemia-reperfusion model with chemokine, infarct-size, and leukocyte readouts

    PMID:17545479

    Open questions at the time
    • Mechanism by which P4HA2 loss activates HIF-1 not resolved
    • Single lab
    • Relationship to collagen hydroxylation activity unclear
  3. 2010 Medium

    Showed P4HA2 is a transcriptional target of wild-type p53, while revealing tumor-type-specific uncoupling of mRNA induction from protein output.

    Evidence p53 overexpression, shRNA knockdown, and chemical induction in glioblastoma cells with RT-PCR and western blot

    PMID:20504876

    Open questions at the time
    • Cause of the mRNA-to-protein uncoupling not identified
    • No direct p53 promoter-binding assay
    • Single tumor context
  4. 2012 Low

    Reported a context-dependent role for P4HA2 in regulating breast cancer cell proliferation and migration.

    Evidence Overexpression and siRNA knockdown in Hs578T cells with proliferation and migration assays

    PMID:22813596

    Open questions at the time
    • No mechanistic pathway placement beyond phenotype
    • Single cell line, single lab
    • Direction of effect not linked to collagen hydroxylation
  5. 2015 High

    Defined P4HA2's enzymatic identity and its functional redundancy with P4HA1, establishing C-P4H-II as the chondrocyte-predominant collagen prolyl 4-hydroxylase whose loss is largely compensable.

    Evidence P4ha2-/- and P4ha1+/-;P4ha2-/- mouse models with hydroxyproline quantification, collagen Tm, histology and atomic force microscopy

    PMID:26001784

    Open questions at the time
    • Degree of redundancy in non-chondrocyte tissues not fully mapped
    • Substrate selectivity between isoforms not defined
  6. 2018 Medium

    Demonstrated that P4HA2 catalytic activity is required for normal collagen hydroxylation in humans, linking loss-of-function to myopic axial elongation.

    Evidence Whole-exome sequencing plus patient-derived fibroblast assays (RT-qPCR, western blot, collagen hydroxylation)

    PMID:29364500

    Open questions at the time
    • Single family/variant
    • No animal rescue of the specific variant
    • Mechanism connecting reduced hydroxylation to ocular axial growth not detailed
  7. 2023 Medium

    Positioned P4HA2 within an IGF-II→IGF1R/IR hybrid receptor→SOX9 profibrotic axis in lung fibroblasts.

    Evidence Primary human lung fibroblasts with IGF-II treatment, receptor knockdown/inhibition, SOX9 siRNA, RT-qPCR and western blot

    PMID:37510994

    Open questions at the time
    • No direct SOX9 promoter-binding evidence at P4HA2
    • Single lab
    • In vivo fibrosis relevance not established
  8. 2025 Low

    Proposed a pVHL-independent mechanism whereby P4HA1/2-driven collagen production sustains HIF-1α and HIF-2α levels in VHL-deficient ccRCC.

    Evidence P4HA1/P4HA2 knockdown/knockout in ccRCC cells with HIF-α western blots and collagen production assays (preprint)

    Open questions at the time
    • Preprint, not peer-reviewed
    • Mechanistic link between collagen production and HIF-α translation/transcription only partial
    • Single lab
  9. 2025 Low

    Linked P4HA2 to PI3K/Akt/mTOR survival signaling and quercetin-induced apoptosis in hepatocellular carcinoma cells.

    Evidence siRNA knockdown with quercetin treatment and pharmacological pathway modulators in HCC cells; viability and apoptosis assays

    PMID:40347062

    Open questions at the time
    • Mechanistic link between P4HA2 and PI3K/Akt is indirect
    • No biochemical reconstitution
    • Single lab
  10. 2026 Medium

    Established that P4HA2-mediated collagen hydroxylation is required for proper scleral/corneal ECM composition and refractive function in vivo.

    Evidence P4ha2-/- mice and CRISPR P4HA2-knockout HEK293 cells with electron microscopy, hydroxylation quantification and western blots

    PMID:41756678

    Open questions at the time
    • Mechanism connecting fibronectin elevation/collagen I reduction not fully resolved
    • Single lab
  11. 2026 High

    Showed that prolyl 4-hydroxylation of type I collagen is mediated exclusively by P4HA1 and P4HA2, with P4HA3 unable to substitute.

    Evidence CRISPR P4ha3-/- and P4ha1-/-;P4ha2-/- cells with direct C-P4H activity assays, hydroxyproline, collagen Tm, pepsin-resistance and fibril assembly assays

    PMID:41999892

    Open questions at the time
    • Isoform-specific substrate preferences across collagen types not fully mapped
    • Single lab
  12. 2026 Low

    Placed P4HA2 downstream of the circadian transcription factor BMAL1 in a glucose-responsive collagen synthesis pathway in chondrocytes.

    Evidence BMAL1 siRNA knockdown in primary human chondrocytes under high glucose with RT-qPCR, western blot and collagen II quantification

    PMID:41630778

    Open questions at the time
    • No direct BMAL1 promoter-binding evidence
    • Single method per readout
    • Single lab

Open questions

Synthesis pass · forward-looking unresolved questions
  • How the multiple upstream transcriptional inputs (HIF-1, p53, SOX9, BMAL1) are integrated to set P4HA2-dependent collagen hydroxylation in specific tissues, and the precise mechanism linking P4HA2/collagen production to HIF-α stabilization, remain unresolved.
  • No unified model integrating the distinct transcriptional regulators
  • pVHL-independent HIF-α mechanism unconfirmed in peer review
  • Tissue-specific isoform redundancy incompletely mapped

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140096 catalytic activity, acting on a protein 3 GO:0016491 oxidoreductase activity 2
Pathway
R-HSA-1474244 Extracellular matrix organization 2 R-HSA-392499 Metabolism of proteins 2
Partners
Complex memberships
collagen prolyl 4-hydroxylase (C-P4H-II)

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 C-P4H-II (encoded by P4HA2) is an α2β2 tetrameric collagen prolyl 4-hydroxylase that catalyzes formation of 4-hydroxyproline residues required for collagen triple helix formation and thermal stability; C-P4H-II predominates in chondrocytes. P4ha2-/- mice showed no overt phenotype alone, but P4ha1(+/-);P4ha2(-/-) compound mutant mice exhibited chondrodysplasia, kyphosis, reduced 4-hydroxyproline content, decreased collagen II melting temperature, and biomechanically impaired extracellular matrix, demonstrating that C-P4H-I can largely compensate for C-P4H-II loss in endochondral bone development. Genetic knockout mouse models (P4ha2-/-, P4ha1+/-;P4ha2-/- compound mutants), collagen biochemistry (hydroxyproline quantification, Tm measurement), histology, atomic force microscopy The Journal of biological chemistry High 26001784
2006 HIF-1 transcriptionally upregulates P4HA2 (and P4HA1) in primary human articular chondrocytes under hypoxia (1% O2); this upregulation is abolished by the HIF-1 inhibitor 2-methoxyestradiol, indicating P4HA2 is a HIF-1 target gene that contributes to increased posttranslational collagen modification under low-oxygen conditions. Primary human chondrocyte culture under 1% O2, real-time PCR, HIF-1 inhibition with 2-methoxyestradiol, immunohistochemistry on OA cartilage The American journal of pathology Medium 16877351
2007 siRNA-mediated silencing of P4HA2 activates HIF-1, which attenuates TNF-α-induced expression of CXC chemokines (KC, LIX), CC chemokine MCP-1, and ICAM-1 in cardiomyocytes in vitro and in postischemic hearts in vivo, reducing neutrophil infiltration and myocardial infarct size by >60%; this places P4HA2 upstream of HIF-1 in cardiac ischemia-reperfusion inflammatory signaling. siRNA knockdown of P4HA2 in HL-1 cardiomyocytes and murine in vivo I/R model, cytokine/chemokine quantification, infarct size measurement, leukocyte infiltration assay American journal of physiology. Heart and circulatory physiology Medium 17545479
2010 Wild-type p53 transcriptionally induces P4HA2 mRNA in glioblastoma cells (demonstrated by p53 overexpression, shRNA knockdown, and chemical induction); however, in glioblastoma this p53-driven P4HA2 mRNA upregulation does not lead to increased P4HA2 protein, increased endostatin production, or antiangiogenic effects on endothelial cells, indicating a silenced downstream signaling pathway specific to this tumor type. p53 overexpression in TP53-deleted LN-308 cells, shRNA knockdown in LNT-229 cells, camptothecin-induced p53 activation, RT-PCR, western blot, endothelial cell sprouting/viability/transmigration assays Neuro-oncology Medium 20504876
2018 A missense variant c.1147A>G (p.Lys383Glu) in P4HA2 reduces P4HA2 mRNA and protein expression and decreases collagen hydroxylation and deposition in primary mutant fibroblasts compared to healthy cell lines, demonstrating that P4HA2 catalytic activity is required for normal collagen hydroxylation and that loss-of-function causes myopic axial elongation. Whole-exome sequencing, in vitro studies with primary fibroblast cultures from mutation carriers vs. controls (RT-qPCR, western blot, collagen hydroxylation assay) Clinical genetics Medium 29364500
2012 Overexpression of P4HA2 in the Hs578T breast cancer cell line suppresses cell proliferation and migration, while RNA interference of P4HA2 has the opposite effect, establishing a functional role of P4HA2 in regulating breast cancer cell behavior in vitro. P4HA2 overexpression and siRNA knockdown in Hs578T cells, proliferation assays, migration assays Biochemistry. Biokhimiia Low 22813596
2023 IGF-II induces P4HA2 mRNA and protein expression in primary human lung fibroblasts via the IGF1R/IR hybrid receptor and this induction is regulated downstream in a SOX9-dependent manner, placing P4HA2 in an IGF-II→IGF1R/IR hybrid receptor→SOX9→P4HA2 profibrotic signaling axis. Primary human lung fibroblast treatment with IGF-II, receptor knockdown/inhibition, SOX9 siRNA knockdown, RT-qPCR, western blot International journal of molecular sciences Medium 37510994
2025 P4HA1 and P4HA2 are required for HIF-1α translation and HIF-2α transcription and translation in VHL-deficient clear cell renal cell carcinoma (ccRCC) cells independently of pVHL; this regulation is mediated in part through P4HA1/2-driven collagen production, revealing a pVHL-independent mechanism by which collagen prolyl hydroxylases sustain HIF-α levels. P4HA1/P4HA2 knockdown/knockout in ccRCC cells, western blot for HIF-1α and HIF-2α protein, collagen production assays, pVHL-deficient cell models bioRxivpreprint Low
2026 P4ha2-/- knockout mice show compromised visual acuity, time-dependent disruption of collagen fibril arrangement in sclera and cornea due to decreased collagen hydroxylation (reduced thermal stability), elevated fibronectin, and reduced collagen I in sclera/cornea; P4HA2-knockout HEK293 cells replicate the ECM imbalance, establishing that P4HA2-mediated collagen hydroxylation is required for normal scleral/corneal ECM composition and refractive function. P4ha2-/- knockout mice and P4HA2-knockout HEK293 cells (CRISPR), biometric visual assessments, electron microscopy of collagen fibrils, collagen hydroxylation quantification, western blot for fibronectin and collagen I Human mutation Medium 41756678
2026 In vitro activity assays using CRISPR-generated P4ha1-/-;P4ha2-/- cells (with P4HA3 as the only remaining isoform) showed no 4-hydroxyproline formation in type I collagen, demonstrating that P4HA3 does not hydroxylate type I collagen, and that prolyl 4-hydroxylation of type I collagen is mediated exclusively by P4HA1 and P4HA2. CRISPR/Cas9 knockout cells (P4ha3-/-, P4ha1-/-;P4ha2-/-), C-P4H activity assays, 4-hydroxyproline content measurement, collagen Tm, pepsin-resistance assay, collagen fibril assembly assay The Journal of biological chemistry High 41999892
2025 Quercetin downregulates P4HA2 expression in hepatocellular carcinoma (HCC) cells, and P4HA2 knockdown enhances quercetin-induced apoptosis; the apoptotic effect is mediated through inhibition of the PI3K/Akt/mTOR pathway, placing P4HA2 upstream of this survival signaling axis in HCC cells. P4HA2 siRNA knockdown in HCC cells, quercetin treatment, PI3K/Akt/mTOR pathway inhibitors (LY294002, Z-VAD-FMK) and activator (740Y-P), cell viability and apoptosis assays Cancer reports (Hoboken, N.J.) Low 40347062
2026 BMAL1 knockdown reduces P4HA2 and COL2A1 expression in both macroscopically normal and OA chondrocytes under high-glucose conditions, placing P4HA2 downstream of the circadian clock transcription factor BMAL1 in a glucose-responsive collagen synthesis pathway. Primary human chondrocyte culture under high glucose, BMAL1 siRNA knockdown, RT-qPCR, western blot, secreted collagen II quantification Osteoarthritis and cartilage open Low 41630778

Source papers

Stage 0 corpus · 17 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 Regulation of type II collagen synthesis during osteoarthritis by prolyl-4-hydroxylases: possible influence of low oxygen levels. The American journal of pathology 76 16877351
2016 A Genome-wide Association Study Identifies Risk Alleles in Plasminogen and P4HA2 Associated with Giant Cell Arteritis. American journal of human genetics 75 28041642
2007 Activation of hypoxia-inducible factor-1 via prolyl-4 hydoxylase-2 gene silencing attenuates acute inflammatory responses in postischemic myocardium. American journal of physiology. Heart and circulatory physiology 64 17545479
2007 Refined genomic localization and ethnic differences observed for the IBD5 association with Crohn's disease. European journal of human genetics : EJHG 63 17213842
2015 Severe Extracellular Matrix Abnormalities and Chondrodysplasia in Mice Lacking Collagen Prolyl 4-Hydroxylase Isoenzyme II in Combination with a Reduced Amount of Isoenzyme I. The Journal of biological chemistry 48 26001784
2018 Autosomal-dominant myopia associated to a novel P4HA2 missense variant and defective collagen hydroxylation. Clinical genetics 24 29364500
2010 Defective p53 antiangiogenic signaling in glioblastoma. Neuro-oncology 17 20504876
2023 The Role of SOX9 in IGF-II-Mediated Pulmonary Fibrosis. International journal of molecular sciences 12 37510994
2018 Early posterior vitreous detachment is associated with LAMA5 dominant mutation. Ophthalmic genetics 11 30589377
2017 A long non-coding RNA lncRNA-PE promotes invasion and epithelial-mesenchymal transition in hepatocellular carcinoma through the miR-200a/b-ZEB1 pathway. Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine 10 28488544
2025 Quercetin Induces Apoptosis Through Downregulating P4HA2 and Inhibiting the PI3K/Akt/mTOR Axis in Hepatocellular Carcinoma Cells: An In Vitro Study. Cancer reports (Hoboken, N.J.) 9 40347062
2012 Profiling and comparative analysis of glycoproteins in Hs578BST and Hs578T and investigation of prolyl 4-hydroxylase alpha polypeptide II expression and influence in breast cancer cells. Biochemistry. Biokhimiia 7 22813596
2019 Comparative analysis of p4ha1 and p4ha2 expression during Xenopus laevis development. The International journal of developmental biology 2 31250915
2026 High glucose upregulates BMAL1 in chondrocytes from macroscopically normal and osteoarthritic human cartilage but this only results in increased collagen synthesis in chondrocytes from macroscopically normal cartilage regions. Osteoarthritis and cartilage open 0 41630778
2026 P4HA2 Participates in Pathogenesis of Refractive Error by Regulating Collagen Posttranslational Modification and Extracellular Matrix Balance. Human mutation 0 41756678
2026 P4HA3 is dispensable for prolyl 4-hydroxylation of type I collagen during mouse development. The Journal of biological chemistry 0 41999892
2026 Mutation Screening of ARR3, CACNA1F, P4HA2, TRPM1, COL2A1, COL11A1 and PAX6 in a Chinese Cohort of 37 Patients with Early-Onset High Myopia. Genes 0 42074509

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