| 1990 |
The DNA-binding subunit of NF-κB (p50) is identical to the transcription factor KBF1, which binds H-2 and β2-microglobulin enhancer sequences; KBF1/p50 displays extensive amino acid sequence homology with the v-rel oncogene product and Drosophila dorsal, placing it in the Rel family. In vitro experiments demonstrated functional homologies between KBF1 and v-rel. |
cDNA cloning, sequence analysis, in vitro DNA-binding and functional assays |
Cell |
High |
2203531
|
| 1987 |
KBF1 (later identified as p50) was purified from nuclear extracts by sequence-specific DNA affinity chromatography; a 48 kDa protein was shown after SDS-PAGE, elution, and renaturation to bind both H-2 and β2-microglobulin enhancer sequences, establishing its role as a shared transcriptional regulatory factor for MHC class I genes. |
Protein purification, gel retardation, DNase I footprinting |
The EMBO journal |
High |
3322806
|
| 1994 |
The ubiquitin-proteasome pathway is required for processing of the NF-κB1 p105 precursor to p50: p105 processing was blocked by proteasome inhibitors and in yeast proteasome mutants in vitro; the C-terminal IκB-like region of p105 is degraded while the N-terminal p50 domain is released, establishing limited proteolysis by the 26S proteasome as the mechanism of p50 generation. |
In vitro processing assay with proteasome inhibitors; yeast proteasome mutants; ubiquitin conjugation assays |
Cell |
High |
8087845
|
| 1992 |
DNA binding activity of p50 (NF-κB subunit) is regulated by redox state via cysteine 62: thioredoxin stimulates p50 DNA binding by reducing a disulfide bond involving Cys62; Cys62→Ser substitution abolishes sensitivity to –SH modifying agents and to thioredoxin stimulation, and co-transfection of thioredoxin with an HIV LTR reporter produces NF-κB-dependent transcriptional activation. |
Site-directed mutagenesis of p50 Cys62, in vitro DNA-binding EMSA, thioredoxin treatment, disulfide cross-linking detection, co-transfection reporter assay |
Nucleic acids research |
High |
1508666
|
| 1998 |
p50 is generated by a cotranslational processing event involving the 26S proteasome rather than by post-translational processing of p105; cotranslational folding of sequences near the C-terminus of p50 abrogates proteasome processing and diverts ribosomes toward producing full-length p105, demonstrating that p105 is not the precursor of p50 but rather an independent product. |
In vitro translation with proteasome inhibitors, pulse-chase labeling, domain-deletion constructs |
Cell |
High |
9529257
|
| 1998 |
p105 processing to p50 by the ubiquitin-proteasome pathway requires E1, one of two E2s (E2-25K or a UBCH5/UBC4-family member), and a new 50 kDa E3 (named E3κB); the 26S proteasome alone provides all proteolytic activities for processing. A C-terminally truncated p105 form (p97) is processed more efficiently than full-length p105 even when ubiquitinated to similar levels, indicating that the C-terminal region of p105 also restrains proteolytic processing. |
In vitro ubiquitination reconstitution with purified E1/E2/E3 and 26S proteasomes from HeLa extracts |
The Journal of biological chemistry |
High |
9535861
|
| 1998 |
p105 processing requires the ubiquitin-proteasome pathway in both yeast and mammalian cells; yeast mutants in 20S proteasome subunits, 19S ATPases, and proteasome-associated isopeptidase doa4 inhibit or abolish processing; a ubiquitinated intermediate accumulates in some mutants. Notably, the glycine-rich region (GRR) required for processing in mammalian cells is not required in yeast, indicating mechanistic differences between species. |
Yeast genetic screens with proteasome/ubiquitin pathway mutants; immunoblot detection of ubiquitinated intermediates |
The Journal of biological chemistry |
High |
9430676
|
| 1998 |
A glycine-rich region (GRR) within p105 serves as a processing stop signal for the 26S proteasome, preventing complete degradation and yielding p50. Residues 441–454 (including Lys441/442 as ubiquitination targets and residues 446–454 as a ligase recognition motif) are important for constitutive processing. IKK-mediated phosphorylation of the C-terminal domain (residues 918–934) recruits SCFβ-TrCP ubiquitin ligase, leading to accelerated processing/degradation. |
Deletion and point mutagenesis of p105, ubiquitination assays, IKK phosphorylation assays, in vitro processing |
Biochimie |
High |
11295495
|
| 1996 |
NF-κB controls its own inhibitor IκBα through an inducible autoregulatory pathway: the p65 subunit of NF-κB directly activates IκBα gene transcription; newly synthesized IκBα associates with p65, restoring cytoplasmic inhibition. This feedback loop ensures transient nuclear NF-κB activity. |
Transfection reporter assays, immunoprecipitation, Northern blot; p50/p65 subunit-specific dissection |
Annual review of immunology |
High |
8717528
|
| 2002 |
The p105 death domain (DD) acts as a docking site for the IKK complex (both IKK1 and IKK2), increasing local IKK concentration near the PEST region and facilitating efficient serine 927 phosphorylation of p105, which is required for signal-induced p105 proteolysis by TNFα. Deletion of the DD or the L841A point mutation (homologous to the lpr mutation in Fas) substantially reduces IKK binding, Ser927 phosphorylation, and p105 proteolysis. |
Co-immunoprecipitation of endogenous proteins, in vitro kinase assays with purified IKK1/IKK2, stable transfection of DD mutants in HeLa cells, TNFα stimulation |
The Journal of biological chemistry |
High |
11976329
|
| 2003 |
NF-κB1 p105 serves as a negative regulator of the MEK kinase TPL-2 (Cot) through two distinct interactions: the TPL-2 C-terminus binds p105 residues 497–534, and the TPL-2 kinase domain binds the p105 death domain. Binding to the death domain inhibits TPL-2 MEK kinase activity in vitro, and this inhibition is augmented by the concurrent C-terminal interaction. Both interactions are required for inhibition of TPL-2 activity in co-transfected cells; a C-terminally truncated oncogenic TPL-2 mutant is insensitive to p105 inhibition. |
In vitro kinase assay, co-immunoprecipitation, deletion/point mutagenesis, co-transfection in cells |
Molecular and cellular biology |
High |
12832462
|
| 2002 |
p105/IκBγ uses the same binding mode as classical IκBs to interact with NF-κB dimers, requiring at least one p50 subunit (the 'obligatory' subunit) whose NLS is masked by the ankyrin repeat domain. Unlike IκBα, which allows nuclear entry via the exposed NLS of the non-specific subunit, p105 retains the complex in the cytoplasm; the p105 death domain is essential for cytoplasmic sequestration but requires cooperation with the overall three-dimensional scaffold of the ARD–NF-κB dimer assembly. |
Biochemical binding assays, subcellular fractionation, deletion mutagenesis of p105 death domain and ARD |
The Journal of biological chemistry |
High |
12399470
|
| 2009 |
p105 and p100 assemble into high-molecular-weight heterogeneous complexes (HMW) that contain multiple NF-κB isoforms. p105 binds NF-κB subunits via two distinct modes: direct RHD–RHD dimerization and ankyrin repeat–mediated binding to preformed NF-κB dimers (IκBγ/IκBδ activities). This HMW complex architecture contributes to regulation of all NF-κB isoforms and controls kinetics of NF-κB dimer availability. |
Biochemical fractionation of endogenous proteins, purification of recombinant proteins, EMSA, co-immunoprecipitation |
Molecular cell |
High |
19524538
|
| 2009 |
PKA anchored by AKAP95 phosphorylates p105 (NF-κB1) at a site adjacent to the IKK target region, suppressing TNFα gene expression downstream of TLR4 signaling. This identifies p105 as a substrate of PKA-AKAP95 and establishes crosstalk between the cAMP and TLR4 pathways through PKA-dependent scaffolding at p105. |
Multigene RNAi screening, cAMP analog experiments, selective PKA anchoring inhibitors, time-lapse microscopy, phosphorylation mapping |
Science signaling |
High |
19531803
|
| 2006 |
p105 phosphorylation by the oncoprotein kinase Tpl2 does not inhibit Tpl2's intrinsic kinase activity; instead, p105-bound Tpl2 remains catalytically active but uses p105 as a competitive substrate, blocking Tpl2's access to its physiological target MEK1. This establishes p105 as a competitive inhibitor of Tpl2 that sequesters the kinase away from MEK1. |
In vitro kinase assays with p105 and MEK1 as substrates, co-immunoprecipitation, transfection experiments |
Biochimica et biophysica acta |
High |
16448710
|
| 2001 |
Signal-induced p105 processing is inhibited by co-expression of p50 or other NF-κB subunits (RelA, c-Rel) that physically interact with p105; newly synthesized p105 is processed more rapidly than accumulated p105 already in complex with p50. LPS-induced p105 degradation in monocytic cells is not coupled to generation of p50, demonstrating that processing and inducible degradation are differentially regulated. |
Transient transfection in COS7 cells, pulse-chase labeling, immunoprecipitation, LPS stimulation of monocytic cells |
Oncogene |
Medium |
8649779
|
| 2006 |
Two distinct ubiquitin-dependent mechanisms regulate p105: (1) a Processing Inhibitory Domain (PID) restrains constitutive processing, and its removal allows efficient processing requiring ubiquitination on a single (non-specific) lysine; (2) signal-induced complete degradation requires ubiquitination on multiple lysines. Removal of the PID markedly increases processing efficiency. |
Deletion mutagenesis, in vitro ubiquitination and processing assays |
Biochemical and biophysical research communications |
Medium |
16678126
|
| 2009 |
ABIN-1 inhibits NF-κB by blocking p105 processing to p50; ABIN-1 physically interacts with p105 but binding is not required for inhibition of processing — rather, ABIN-1 stabilizes p105 and increases its own levels, potentiating NF-κB inhibition. Inhibition requires the ABIN homology domain (AHD)-2 of ABIN-1 and the Processing Inhibitory Domain (PID) of p105. |
Co-immunoprecipitation, protein stability assays, domain deletion mutagenesis, p105 processing assays |
Biochemical and biophysical research communications |
Medium |
19695220
|
| 1998 |
Ceramide (via the cell-permeable C2-ceramide analogue) activates NF-κB primarily by promoting p105 processing to p50, generating predominantly p50/p50 homodimers that lack transactivating activity; ceramide has only a marginal effect on IκBα degradation. TNFα, by contrast, stimulates both IκBα degradation and p105 processing. |
EMSA, supershift assay, immunoblot scanning densitometry of p105/p50 ratios, luciferase reporter assay |
The Journal of biological chemistry |
Medium |
9624136
|
| 2002 |
p105 physically interacts with IKK1 and IKK2 in HeLa cells (co-immunoprecipitation of endogenous proteins); this interaction is mediated via the p105 death domain and is required for efficient IKK-mediated Ser927 phosphorylation (confirmed separately in PMID 11976329). |
Co-immunoprecipitation of endogenous p105 with IKK complex components |
The Journal of biological chemistry |
Medium |
11976329
|
| 1998 |
p50 homodimers, induced by long-term LPS pre-treatment, bind the positively acting κB3 element of the TNFα promoter and are associated with LPS tolerance: p50-/- macrophages fail to develop LPS tolerance, do not downregulate LPS-induced TNF mRNA with prolonged LPS exposure, and ectopic p50 overexpression reduces TNFα promoter transcriptional activation. |
Genetic deletion (p50-/- mice), ectopic overexpression, κB site binding analysis (EMSA), TNFα promoter reporter assay |
The Journal of clinical investigation |
High |
9802878
|
| 1998 |
p105 (lacking the C-terminal half) deficiency in mice leads to enhanced constitutive p50 homodimer formation and elevated inducible NF-κB activity, demonstrating that p105 is indispensable for restraining p50 activity. p50 homodimers function as transcriptional activators or repressors depending on cell type, with NF-κB-regulated genes upregulated in p105-/- thymus but downregulated in p105-/- macrophages. |
Genetic KO mouse model (p105-/- expressing p50), EMSA, gene expression analysis |
The Journal of experimental medicine |
High |
9529315
|
| 2006 |
p50/p50 homodimers act as transcriptional activators of IL-10 by binding the κB cis-element at −55/−46 of the IL-10 proximal promoter and forming a complex with the transcriptional co-activator CREB-binding protein (CBP). p50-/- macrophages show decreased IL-10 and increased TNFα/IL-12 in response to LPS, and p50-/- mice are more susceptible to lethal endotoxemia. |
EMSA, co-immunoprecipitation of p50 with CBP, luciferase reporter assay, p50-/- mouse macrophages |
The Journal of biological chemistry |
High |
16835236
|
| 2002 |
In resting cells, p50/p50 homodimers bind DNA constitutively in complex with HDAC-1, suppressing NF-κB-dependent gene expression; upon appropriate stimulation, nuclear p65 (phosphorylated) associates with CBP and displaces the repressive p50-HDAC-1 complexes. Phosphorylation of p65 determines whether it associates with CBP (activating) or HDAC-1 (repressive). |
Co-immunoprecipitation, EMSA, chromatin immunoprecipitation, transfection reporter assays |
Molecular cell |
High |
11931769
|
| 2004 |
p50 (NF-κB1) is required for unloading-induced skeletal muscle atrophy: Nfkb1-/- mice are resistant to hindlimb-unloading-induced decrease in soleus fiber cross-sectional area, and NF-κB reporter gene activation induced by unloading is completely abolished in Nfkb1-/- soleus. Bcl-3 co-operates with p50 in this pathway. Loss of p50 also abolishes the slow-to-fast myosin isoform shift. |
Genetic KO (Nfkb1-/-) mice, hindlimb unloading model, fiber cross-sectional area measurement, NF-κB luciferase reporter in vivo, myosin isoform analysis |
The Journal of clinical investigation |
High |
15546001
|
| 2004 |
p50 (NF-κB1) limits hepatic inflammatory and fibrogenic responses: nfkb1-/- mice develop more severe neutrophilic inflammation and fibrosis after chronic CCl4 injury. The mechanism involves p50-dependent HDAC1-mediated repression of the TNFα promoter in hepatic stellate cells, as nfkb1-/- cells express TNFα promoter activity, mRNA, and protein inappropriately. |
Nfkb1-/- mouse model, chronic CCl4 liver injury, hepatic stellate cell isolation, TNFα promoter-reporter assay, HDAC1 co-repressor mechanism analysis |
The American journal of pathology |
High |
15743782
|
| 2011 |
NF-κB p50 homodimers repress a subset of IFN-inducible genes through binding to guanine-rich IFN response elements (G-IREs). Structural and genome-wide analyses identified this novel p50-G-IRE interaction; p50 deficiency leads to inappropriate IFN-β production in response to bacterial DNA (TLR9 signaling) due to de-repression of the IFNβ enhancer G-IRE, enforcing stimulus specificity of composite promoters. |
Genome-wide expression analysis, EMSA, crystal structure of p50 bound to G-IRE, mathematical modeling, p50-/- macrophages with TLR9 stimulation |
Science signaling |
High |
21343618
|
| 1993 |
DNA-binding specificity of NFKB1 (p50) versus RelA (p65) is conferred by a subdomain within the Rel Homology Domain (RHD): substitution of four amino acids from NFKB1 into RelA transfers NFKB1-selective DNA-binding specificity to RelA. A single amino acid change (His→Arg) within the NFKB1 N-terminal 34 residues switches specificity toward the RelA-selective motif, identifying a discrete specificity-determining subdomain. |
Domain-swap fusion proteins, site-directed mutagenesis, EMSA with NFKB1- and RelA-selective DNA motifs |
Molecular and cellular biology |
High |
8321192
|
| 1995 |
The dimerization domain of RelB was characterized using p50 and p52 as partners; a structural core of ~110 residues is sufficient for stable Rel/NF-κB dimer formation. Conserved residues in the dimerization domain also contribute to kappa B DNA recognition. Dimerization-defective mutants can be rescued by compensatory mutations introduced in trans in the dimerization partner p50, demonstrating intermolecular complementation. |
Mutagenesis of >50 RelB mutants, dimerization assays, DNA-binding assays with p50 and p52 as partners, trans-rescue experiments |
Molecular and cellular biology |
High |
7760806
|
| 1998 |
p50 suppresses apoptosis during EMCV infection: p50-/- and p65-/- murine embryonic fibroblasts undergo accelerated, premature apoptotic cytotoxicity following EMCV infection (beginning at 6 h), while wild-type cells are protected. In p50-/- mice, this accelerated apoptosis of infected cells allows host clearance of virus before viral burst, reducing viral burden. p50 is thus required for NF-κB-dependent suppression of apoptosis in vivo. |
p50-/- and p65-/- mouse MEFs, EMCV infection, apoptosis assays (plasma membrane and nuclear changes), viral burden measurement in vivo |
Journal of virology |
High |
9621024
|
| 2009 |
Crystal structure of p50:RelA (NF-κB) heterodimer bound to the tandem κB sites of the HIV-1 LTR reveals a dimeric-dimer arrangement: two p50:RelA dimers bind both adjacent sites simultaneously, interacting through protein contacts accommodated by DNA bending. The two dimers clamp DNA from opposite faces and form a topological trap; biochemical analyses show apparent anti-cooperativity but enhanced kinetic stability (slow on/off rates) for this higher-order complex. |
X-ray crystallography, EMSA kinetic analysis, biochemical binding studies |
Journal of molecular biology |
High |
19683540
|
| 2004 |
Bee venom (BV) and its major component melittin directly bind to the p50 subunit of NF-κB as measured by surface plasmon resonance (BV: Kd = 4.6×10⁻⁶ M; melittin: Kd = 1.2×10⁻⁸ M), inhibiting p50 translocation and NF-κB DNA-binding/transcriptional activity, thereby blocking LPS-induced inflammatory gene expression. |
Surface plasmon resonance, gel mobility shift assay, luciferase reporter, Western blotting, in vivo arthritis models |
Arthritis and rheumatism |
Medium |
15529353
|
| 2004 |
IL-10 inhibits nuclear NF-κB by selectively inducing nuclear translocation and DNA-binding of p50/p50 homodimers in human monocytic cells; IL-10 pre-treatment blocks p65 translocation induced by TNFα while not altering p50 translocation. In p105/p50-deficient macrophages, IL-10 fails to inhibit constitutive MIP-2α and IL-6 production, establishing p50 as the mediator of IL-10's nuclear NF-κB inhibitory effect. |
EMSA, nuclear/cytoplasmic fractionation, p105/p50-/- macrophages, cytokine measurement |
Clinical and experimental immunology |
High |
14678266
|
| 2006 |
IKKβ-NF-κB signaling activates a proapoptotic JNK cascade through induction of GADD45α → MKK4 → JNK in response to arsenite; this proapoptotic role is dependent on p50 (not p65/RelA), and p50 increases GADD45α protein stability by suppressing its ubiquitination and proteasome-dependent degradation, revealing a novel transcription-independent function of p50 in regulating protein modification. |
IKKβ overexpression, siRNA knockdown, GADD45α ubiquitination assay, JNK activation assays, p50-specific dependency demonstrated by subunit-specific knockdown |
The Journal of cell biology |
Medium |
17116751
|
| 2010 |
HDAC inhibition (by trichostatin A) induces acetylation of NF-κB p50 at lysine residues, increases nuclear p50 and p50 DNA-binding activity, and protects against cardiac ischemia-reperfusion injury; this cardioprotection is abolished by genetic deletion of p50 or siRNA knockdown of p50, establishing that p50 acetylation is required for HDAC inhibitor-mediated cardioprotection. |
p50-/- mice, TSA treatment, Langendorff heart perfusion, immunoprecipitation with anti-acetylation antibody, EMSA, luciferase reporter, siRNA knockdown in H9c2 cells |
American journal of physiology. Heart and circulatory physiology |
Medium |
20382965
|
| 2013 |
Resolvin D1 (RvD1) triggers phosphorylation and proteasomal degradation of p105 to generate p50, which then accumulates in the nucleus as p50/p50 homodimers, suppressing TNFα expression and restoring efferocytosis; knockdown of p50 abolishes RvD1's ability to suppress TNFα and restore efferocytosis, establishing p50/p50 homodimers as the effector of RvD1-mediated inflammation resolution. |
siRNA knockdown of p50, nuclear fractionation, EMSA with supershift, murine peritonitis model, efferocytosis assay |
Journal of cell science |
Medium |
23788426
|
| 2015 |
Intracellular annexin A2 (ANXA2) binds to the p50 subunit of NF-κB in a calcium-independent manner; the ANXA2-p50 complex translocates to the nucleus and increases NF-κB transcriptional activity, upregulating IL-6 and contributing to anti-apoptotic signaling and gemcitabine resistance in pancreatic cancer cells. |
Co-immunoprecipitation, nuclear fractionation, luciferase reporter assay, siRNA knockdown, ANXA2 mutant (Y23A) |
Cell death & disease |
Medium |
25611381
|
| 2013 |
An NF-κB p50/p65 responsive site was mapped to ~178 nt upstream of the MIR155HG transcription start site; the −178 site is specifically bound by the p50/p65 heterodimer (demonstrated by EMSA and ChIP), and mutation of this site abolishes p65-induced reporter gene activation, establishing MIR155HG (miR-155 precursor) as a direct NF-κB target gene requiring p50/p65. |
EMSA, supershift assay, ChIP, deletion and site-directed mutagenesis of the MIR155HG promoter, luciferase reporter |
BMC molecular biology |
Medium |
24059932
|
| 2015 |
NFKB1 p50 haploinsufficiency (due to heterozygous loss-of-function mutations causing in-frame exon skipping or frameshift with degradation of altered protein) causes common variable immunodeficiency (CVID) in humans; residual p105 and p50 from the non-mutated allele were normal, and all carriers showed B-lymphocyte differentiation defects, establishing NFKB1 haploinsufficiency as a monogenic cause of CVID. |
Whole-exome/genome sequencing, immunoblotting, B-cell immunophenotyping, lymphocyte stimulation assays in patient-derived cells |
American journal of human genetics |
High |
26279205
|
| 2017 |
Distinct heterozygous NFKB1 missense and nonsense variants produce mechanistically different functional defects: p.R157X causes proteasome-dependent degradation of both truncated and wild-type proteins leading to dramatic loss of p50/p105; p.H67R reduces nuclear entry of p50 and decreases transcriptional activity in luciferase assays; p.I553M reduces p105 phosphorylation and stability without affecting p50 function. Affinity purification mass spectrometry shows both missense variants alter p50/p105 protein-protein interactions. |
Luciferase reporter, nuclear fractionation, immunoblotting, proteasome inhibitor treatment, affinity purification mass spectrometry (AP-MS) |
The Journal of allergy and clinical immunology |
High |
28115215
|
| 2014 |
Eriocalyxin B (EriB) directly targets cysteine 62 of p50 through its α,β-unsaturated ketone, blocking p50 binding to DNA response elements without affecting p50/p65 dimerization or nuclear translocation; siRNA-mediated knockdown of p50 attenuates EriB-induced apoptosis in hepatocellular carcinoma cells, confirming p50 as the functional target. |
Activity-based probe profiling, site-directed mutagenesis (Cys62), EMSA, siRNA knockdown, apoptosis assays |
Oncotarget |
Medium |
25404639
|
| 2020 |
Tumor-derived PGE2 induces nuclear accumulation of p50 NF-κB in monocytic MDSCs, diverting IFNγ responses toward NO-mediated immunosuppression and reducing TNFα expression; at the genome level, p50 promotes STAT1 binding to regulatory regions of iNOS (Nos2) and other IFNγ-dependent genes. Ablation of p50 or pharmacologic inhibition of EP2 or NO reprograms MDSCs to a NOS2^low/TNFα^high phenotype restoring antitumor IFNγ activity. |
p50-/- mice, PGE2 treatment, nuclear fractionation, ChIP-seq for STAT1, pharmacological inhibition, in vivo tumor models |
Cancer research |
High |
32265223
|
| 2009 |
Inactivation of NF-κB p50 in mice leads to hepatic insulin sensitization via post-translational inhibition of p70S6K: p50-KO livers show reduced IKK2/IKKγ activity, which prevents IKK2-mediated stabilization of S6K1 protein; elevated TNFα in p50-KO livers promotes S6K1 proteasomal degradation. Reconstitution of S6K1 in the liver of p50-KO mice blocks the increased insulin sensitivity. |
p50-/- mice, hyperinsulinemic-euglycemic clamp, hepatocyte primary culture, IKK2 activity assay, MG132 proteasome inhibition, adenoviral S6K1 reconstitution |
The Journal of biological chemistry |
Medium |
19433583
|
| 2010 |
TNFα suppresses angiotensinogen (AGT) expression in renal proximal tubular cells through formation of p50/p50 homodimers: TNFα induces both p50/p65 and p50/p50 dimer formation detected by EMSA/supershift; gene silencing of p50 (but not p65) attenuates TNFα-induced AGT suppression, establishing p50/p50 homodimers as the NF-κB complex responsible for AGT transcriptional repression. |
EMSA, supershift assay, siRNA gene silencing of p50 vs. p65, RT-PCR, ELISA for AGT protein |
American journal of physiology. Cell physiology |
Medium |
20592241
|
| 2010 |
IRAK1BP1 binds the p50 precursor p105 and promotes nuclear translocation of p50/p50 homodimers relative to p50/p65 heterodimers, shifting innate immune cytokine profiles toward increased IL-10 and promoting LPS tolerance. IRAK1BP1-deficient mice lacking this molecular switch show altered NF-κB dimer composition and altered cytokine responses. |
IRAK1BP1-/- mice, co-immunoprecipitation of IRAK1BP1 with p105, nuclear/cytoplasmic EMSA, cytokine measurement, forward genetic screen |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
20534545
|
| 1989 |
The B-cell-specific NF-κB binding site in the immunoglobulin κ enhancer can be converted to a site that binds both NF-κB and the ubiquitous KBF1/p50 by a single nucleotide substitution; NF-κB and KBF1 are functionally different despite highly similar DNA recognition specificities, as demonstrated by transient transfection. |
Synthetic altered recognition sequences, EMSA, transient transfection functional assays |
Molecular and cellular biology |
Medium |
2677676
|
| 2014 |
Nfkb1 acts as a haploinsufficient tumor suppressor specifically in the context of DNA alkylation damage: Nfkb1-/- cells accumulate more alkylator-induced mutations (Hprt assay) than wild-type, and Nfkb1-/- mice develop more lymphomas than Nfkb1+/+ after alkylator treatment but not after ionizing radiation. Heterozygous mice develop lymphomas at an intermediate rate while retaining functional p50, confirming haploinsufficiency. |
Hprt mutation assay, in vivo tumor induction with alkylating agents vs. ionizing radiation, Nfkb1-/- and Nfkb1+/- mice |
Oncogene |
Medium |
25043302
|
| 1999 |
Activation-induced upregulation of Fas (CD95) requires NF-κB p50-p65 heterodimer binding to a composite κB-Sp1 element at positions −295 to −286 of the human Fas promoter; Sp1 binds constitutively in resting cells while p50-p65 binding is inducible upon T-cell activation (PMA/ionomycin). Sp1 and NF-κB binding are mutually exclusive (demonstrated by EMSA displacement with purified recombinant Sp1 and p50). Site-directed mutagenesis of critical guanines abolishes activation-dependent Fas promoter induction. |
EMSA, supershift, displacement assay with purified recombinant p50 and Sp1, deletion mutants, site-directed mutagenesis, IκBα overexpression, κB-Sp1 concatemer reporter |
Molecular and cellular biology |
High |
10022897
|
| 2020 |
HSV-1 UL2 protein interacts with NF-κB subunits p65 and p50 (co-immunoprecipitation); amino acids 9–17 of UL2 mediate both NF-κB inhibition and interaction with p65/p50, and UL2 binds the IPT domain of p65. UL2 inhibits NF-κB activity by attenuating TNFα-induced p65 phosphorylation at Ser536 without affecting p65/p50 dimerization or nuclear localization. |
Co-immunoprecipitation, domain deletion mapping, phosphorylation analysis by Western blot, luciferase reporter assay |
Frontiers in immunology |
Medium |
32477319
|
| 1999 |
NF-κB p50/RelB complexes regulate transcriptional elongation of c-myb by binding NF-κB sites flanking the transcriptional pause site in c-myb intron I; p50/RelB (but not p50 or RelB alone) prevents the down-regulation of c-myb mRNA and increases transcriptional elongation in MEL cells undergoing HMBA-induced differentiation, blocking erythroid differentiation. |
Stable transfection of MEL cells with p50 and/or RelB, nuclear run-on transcription assay, c-myb mRNA analysis |
Oncogene |
Medium |
10602492
|