Affinage

NECAP2

Adaptin ear-binding coat-associated protein 2 · UniProt Q9NVZ3

Length
263 aa
Mass
28.3 kDa
Annotated
2026-06-10
7 papers in source corpus 3 papers cited in narrative 3 extracted findings
Cross-family judge faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

NECAP2 is a component of clathrin-coated vesicles that controls clathrin adaptor recruitment to drive fast endocytic recycling (PMID:27206861, PMID:15494011). It was originally identified by proteomics of brain-derived clathrin-coated vesicles, where a consensus motif in NECAP proteins was found to mediate interaction with the AP-2 clathrin adaptor (PMID:15494011). Functionally, NECAP2 governs the fast, direct early endosome-to-plasma membrane recycling route for cargos including EGFR and transferrin receptor by recruiting the AP-1 clathrin adaptor to early endosomes; its loss removes AP-1 from the organelle and produces enlarged early endosomes, with defined protein-binding interfaces in NECAP2 required for this recruitment (PMID:27206861). This activity is pathway-selective: NECAP2 does not regulate clathrin-mediated endocytosis, EGFR degradation, or slow Rab11-dependent recycling (PMID:27206861). Beyond these clathrin-adaptor interactions and the recycling phenotype, no further mechanistic detail has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2004 Medium

    Establishing that NECAP2 is a bona fide constituent of clathrin-coated vesicles and engages the AP-2 adaptor placed it within the clathrin trafficking machinery and gave a molecular handle on its mechanism.

    Evidence Subcellular fractionation of brain clathrin-coated vesicles with mass spectrometry and identification of an AP-2 interaction motif

    PMID:15494011

    Open questions at the time
    • Functional consequence of the AP-2 interaction was not assayed
    • No cargo or pathway role was defined at this stage
    • Abstract-level biochemical validation only
  2. 2013 Low

    An unbiased functional screen tied NECAP2 to receptor endocytic trafficking, implicating it in EGFR handling before any dedicated mechanism was known.

    Evidence High-content microscopy-based siRNA screen of 172 endocytosis/actin genes scoring EGFR endocytosis in HBL100 cells

    PMID:23792445

    Open questions at the time
    • Single screen hit with no NECAP2-specific mechanistic follow-up
    • Did not distinguish endocytosis from recycling steps
    • No interaction partners or interfaces tested
  3. 2016 High

    Defining NECAP2 as a selective driver of fast endosome-to-plasma membrane recycling via AP-1 recruitment resolved which trafficking step it controls and which adaptor interface it uses.

    Evidence siRNA knockdown with EGFR and transferrin receptor recycling assays, endosome morphology imaging, and structure-function mutagenesis of NECAP2 binding interfaces

    PMID:27206861

    Open questions at the time
    • Structural basis of the NECAP2–AP-1 interface not solved atomically
    • How NECAP2 is itself targeted to early endosomes is unresolved
    • Relationship between the AP-2 motif role and AP-1-dependent recycling not reconciled

Open questions

Synthesis pass · forward-looking unresolved questions
  • How NECAP2 is recruited to early endosomes and the structural mechanism by which it engages AP-1 versus AP-2 remains unresolved.
  • No structure of NECAP2 in complex with AP-1 or AP-2
  • Upstream regulators controlling NECAP2 endosomal targeting unknown
  • Physiological consequences in tissue or organismal context uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2
Localization
GO:0005768 endosome 1 GO:0031410 cytoplasmic vesicle 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 2
Partners
Complex memberships
clathrin-coated vesicle

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2016 NECAP2 regulates fast endocytic recycling of EGFR and transferrin receptor by controlling clathrin coat (AP-1 adapter) recruitment to early endosomes; knockdown of NECAP2 causes enlarged early endosomes and loss of AP-1 from the organelle. Structure-function analysis defined the protein-binding interfaces in NECAP2 required for AP-1 recruitment. NECAP2 acts specifically in the fast recycling pathway (direct early endosome-to-plasma membrane route) and does not regulate clathrin-mediated endocytosis, EGFR degradation, or slow Rab11-dependent recycling. siRNA knockdown, recycling assays (EGFR and transferrin receptor), immunofluorescence/endosome morphology analysis, structure-function mutagenesis of NECAP2 binding interfaces Journal of cell science High 27206861
2004 NECAP2 (along with NECAP1) was identified as a component of clathrin-coated vesicles (CCVs) isolated from adult brain, and characterization revealed a new consensus motif in NECAP proteins that mediates interactions with the clathrin adaptor protein AP-2. Subcellular fractionation of brain CCVs, mass spectrometry proteomics, identification of AP-2 interaction motif Biochemical Society transactions Medium 15494011
2013 In an siRNA screen of 172 endocytosis and actin-regulatory genes, NECAP2 knockdown was identified as impairing EGFR endocytosis in human HBL100 breast cancer cells, placing NECAP2 among genes required for EGFR endocytic trafficking. High-content fluorescence microscopy-based siRNA screen for EGFR endocytosis Oncogene Low 23792445

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 Annexin A2 depletion delays EGFR endocytic trafficking via cofilin activation and enhances EGFR signaling and metastasis formation. Oncogene 49 23792445
2023 CDCA8 induced by NF-YA promotes hepatocellular carcinoma progression by regulating the MEK/ERK pathway. Experimental hematology & oncology 30 36639822
2016 NECAP2 controls clathrin coat recruitment to early endosomes for fast endocytic recycling. Journal of cell science 22 27206861
2004 Molecular mechanisms in clathrin-mediated membrane budding revealed through subcellular proteomics. Biochemical Society transactions 19 15494011
2018 Integrated comparison of the miRNAome and mRNAome in muscles of dermatomyositis and polymyositis reveals common and specific miRNA-mRNAs. Epigenomics 13 30523707
2018 Functional analysis of DNA methylation of the PACSIN1 promoter in pig peripheral blood mononuclear cells. Journal of cellular biochemistry 1 30537176
2026 YAP1 Upregulates Cytoskeleton Regulator ARHGEF1 and Tissue Regeneration Factor NEDD9 in a Multiplex Proteomic Study. Neurology international 0 42188696

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