| 2002 |
NXP-2/MORC3 contains three structurally distinct functional domains: a nuclear matrix-binding domain (amino acids 326-353) with a hydrophobic cluster similar to known nuclear matrix targeting signals, an RNA-binding domain (amino acids 500-591) identified by Northwestern analysis, and a coiled-coil domain (amino acids 682-876). The protein localizes to the nuclear matrix and is released by RNase A treatment, indicating RNA-dependent anchoring. |
GFP-tagged truncation mutants, Northwestern analysis, nuclear matrix fractionation with RNase A treatment |
The Journal of biological chemistry |
Medium |
11927593
|
| 2006 |
NXP-2/MORC3 binds preferentially to SUMO-2 in a manner dependent on SUMO-2 lysines K33, K35, and K42; when tethered to a promoter via Gal4 fusion, NXP-2 represses transcription, consistent with a role in SUMO-mediated transcriptional repression. |
GST-SUMO-2 affinity chromatography followed by LC-MS; Gal4 tethering transcription repression assay |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
16567619
|
| 2007 |
MORC3 ATPase activity is required to recruit p53 and Sp100 (but not CBP) to PML nuclear bodies; loss of ATPase activity (E35A mutant) or siRNA knockdown of MORC3 impairs p53 and Sp100 localization at PML-NBs. MORC3 activates p53 transcriptional activity and induces cellular senescence in a p53-dependent manner; genotoxic stress fails to activate p53 transcriptionally in Morc3-/- fibroblasts. |
ATPase-deficient mutant (E35A) expression, siRNA knockdown, immunofluorescence, Morc3-/- fibroblasts, senescence assay |
Molecular biology of the cell |
High |
17332504
|
| 2010 |
MORC3 colocalizes with PML nuclear bodies via a two-step mechanism: (1) ATPase cycle-driven formation of PML-independent MORC3 nuclear domains, and (2) SUMO1-SIM (SUMO-interacting motif)-mediated association with PML. ATP binding induces MORC3 dimerization ('molecular clamp') and ND formation; ATP hydrolysis mediates diffusion and nuclear matrix binding. SUMOylation of MORC3 at five sites is required for its association with PML. |
PML-deficient cells, ATPase mutants, SIM mutants, SUMO site mapping, live-cell imaging, fractionation |
Journal of cell science |
High |
20501696
|
| 2015 |
NXP2/MORC3 associates with influenza A virus polymerase and viral ribonucleoproteins (RNPs) during infection, as shown by co-immunoprecipitation and immunofluorescence. Downregulation of NXP2/MORC3 reduces viral titers and viral RNA/mRNA levels. In a minireplicon system, MORC3 knockdown reduces viral mRNA and CAT protein but not genomic vRNA, indicating a specific role in supporting influenza virus transcription. |
Co-immunoprecipitation, immunofluorescence, shRNA knockdown, minireplicon transcription/replication assay |
Journal of virology |
Medium |
26202233
|
| 2016 |
MORC3 is recruited to HSV-1 genome entry sites in the nucleus and is required for fully efficient recruitment of PML, Sp100, hDaxx, and γH2AX to those sites. Depletion of MORC3 increases replication of ICP0-null HSV-1 and wild-type HCMV. MORC3 is degraded by ICP0 via its RING finger domain (ubiquitin E3 ligase activity), and no other HSV-1 protein is required for this degradation. |
MORC3 depletion (knockdown), plaque assay, immunofluorescence colocalization, ICP0 RING finger mutant analysis |
Journal of virology |
High |
27440897
|
| 2016 |
Crystal structure of mouse MORC3 ATPase-CW domain bound to AMPPNP shows ATP-dependent dimerization of the N-terminal ATPase domain. The CW domain uses an aromatic cage to bind trimethylated H3K4 (H3K4me3) and forms extensive hydrogen bonds with the H3 tail. MORC3 localizes genome-wide to promoters marked by H3K4me3, consistent with its in vitro H3K4me3 binding. |
X-ray crystallography, native mass spectrometry, ChIP-seq, in vitro peptide binding |
Proceedings of the National Academy of Sciences of the United States of America |
High |
27528681
|
| 2016 |
MORC3 possesses intrinsic ATPase activity that requires DNA for stimulation. The CW domain negatively regulates ATPase activity by interacting with the ATPase domain and sterically impeding its access to DNA. H3K4me3 binding by CW is essential for MORC3 recruitment to chromatin and accumulation in nuclear bodies. MORC3 is significantly upregulated in Down syndrome. |
ATPase activity assays, domain interaction biochemistry, chromatin recruitment assays (ChIP/immunofluorescence), genetic analysis |
Cell reports |
High |
27653685
|
| 2016 |
Morc3 protein shifts from nuclear membrane localization to the cytoplasm in Morc3 mutant osteoclasts, and Morc3 mutant mice exhibit reduced osteoclast numbers and bone resorption, increased β-galactosidase senescence activity reduction, decreased STAT1 upregulation in osteoclast lineage, and altered osteoblast differentiation — indicating a role in bone homeostasis and haematopoietic stem cell niche. |
ENU mutagenesis screen, immunofluorescence localization, ex vivo bone assays, in vitro osteoclastogenesis |
Scientific reports |
Low |
27188231
|
| 2019 |
Crystal structure of MORC3 ATPase-CW domain in complex with non-hydrolyzable ATP analog shows the ATPase and CW domains are directly coupled via an extensive interface that stabilizes the fold but inhibits catalytic activity (autoinhibited 'off' state). NMR, enzymatic, mutational, and biochemical analyses demonstrate that CW sterically blocks DNA binding required for catalysis. Binding of CW to histone H3 tail disrupts the ATPase:CW interface, freeing the DNA-binding site (active 'on' state). ATP-induced ATPase dimerization is strictly required for catalytic activity. |
X-ray crystallography, NMR, mutagenesis, enzymatic assays, biochemical binding assays |
Proceedings of the National Academy of Sciences of the United States of America |
High |
30850548
|
| 2019 |
MORC3 forms phase-separated condensates with liquid-like properties in the cell nucleus. The ATPase activity of MORC3 drives phase separation in vitro and requires DNA binding. Releasing CW domain-dependent autoinhibition through H3 association is required for phase separation. MORC3 condensates are heterogeneous and undergo dynamic morphological changes during the cell cycle. |
Fluorescence live-cell imaging, in vitro phase separation assay, ATPase mutants |
iScience |
Medium |
31284181
|
| 2019 |
The CW domain of MORC3 is directly targeted by the C-terminal tail of influenza H3N2 NS1 protein. Crystal structure of MORC3-CW:NS1 complex shows NS1 occupies the same aromatic cage binding site as histone H3. NS1 and H3 peptides bind MORC3-CW with comparable affinities, suggesting NS1 can compete with H3 for CW binding, thereby releasing MORC3 autoinhibition and activating its catalytic ATPase function. |
X-ray crystallography, binding affinity measurements (ITC/fluorescence), cellular analyses |
Structure (London, England : 1993) |
High |
31006586
|
| 2021 |
ICP0 (HSV-1 virulence factor) degrades MORC3, leading to de-repression of a MORC3-regulated DNA element (MRE) adjacent to the IFNB1 locus. This MRE is required in cis for IFNB1 induction via the MORC3 pathway. Loss of MORC3 recapitulates an IRF3- and IRF7-independent IFN response. MORC3 thus functions as both a direct HSV-1 restriction factor (primary anti-viral function) and a repressor of IFN induction (secondary function), constituting a 'self-guarded' immune pathway. |
CRISPR screen, MORC3 knockout, ICP0 overexpression, reporter assays for IFNB1 induction, IRF3/IRF7 knockout cells |
Nature |
High |
34759314
|
| 2021 |
Morc3 knock-out results in de-repression and increased chromatin accessibility of specific ERV families (LTR retrotransposons) in mouse ESCs, with only minor losses of H3K9me3. Proteomic analyses reveal that Morc3 mutant proteins (ATPase-dead and SUMOylation-deficient) fail to interact with the histone H3.3 chaperone Daxx. This interaction depends on Morc3 SUMOylation and Daxx SUMO-binding. Loss of Morc3 results in strongly reduced H3.3 at Morc3 binding sites, demonstrating Morc3 enables Daxx-mediated H3.3 incorporation for ERV silencing. |
sgRNA genome-wide screen, Morc3 KO, ChIP-seq (H3K9me3, H3.3), ATAC-seq, proteomics (MS), Morc3 ATPase and SUMOylation mutants |
Nature communications |
High |
34650047
|
| 2021 |
Morc3 is identified as a novel interacting partner of MIWI2 in mouse embryonic male germ cells. MORC3 functions as a nuclear effector of retrotransposon silencing via piRNA-dependent de novo DNA methylation in embryonic testis, and is also important for transcription of piRNA precursors and subsequent piRNA production. |
Co-immunoprecipitation (MIWI2-MORC3), Morc3 loss-of-function, DNA methylation analysis, piRNA sequencing |
Scientific reports |
Medium |
34650118
|
| 2021 |
Loss of Morc3 in mouse ESCs upregulates transposable elements, specifically LTR-class ERVs. ChIP-seq shows MORC3 binds directly to ERV loci in addition to H3K4me3 promoters. Loss of Morc3 increases chromatin accessibility at ERVs (ATAC-seq) with only minor H3K9me3 changes, suggesting MORC3 acts downstream of or in parallel with TRIM28/SETDB1 at the level of chromatin compaction. |
Morc3 mutant mESCs (MommeD screen), RNA-seq, ChIP-seq, ATAC-seq |
Epigenetics & chromatin |
Medium |
34706774
|
| 2022 |
MORC3 restricts HCMV replication by suppressing the major immediate-early promoter (MIEP) activity and consequent IE1 gene expression with the assistance of PML. HCMV induces transient MORC3 protein reduction via the ubiquitin-proteasome pathway during immediate-early to early stages; MORC3 transcription is later upregulated and protein recovers. Knockdown or knockout of MORC3 augments IE1 expression and viral replication; overexpression inhibits replication. |
siRNA knockdown, CRISPR-Cas9 KO, overexpression, MIEP-based reporter assays, ubiquitin-proteasome pathway inhibitors |
Journal of medical virology |
High |
35879101
|
| 2023 |
MORC3 is recruited to the HCMV major immediate-early promoter (MIEP) and forms MORC3 nuclear bodies that co-localize with viral genomes during HCMV latency in myeloid cells. THP1 cells devoid of MORC3 fail to establish latency. The viral latency-associated LUNA protein deSUMOylates MORC3 (via its deSUMOylase activity), likely preventing untimely HCMV reactivation. MORC3 is induced during latent infection. |
CRISPR-Cas9 sub-genomic epigenetic library screen, MORC3 KO, GFP-MIEP reporter, immunofluorescence, LUNA protein deSUMOylase mutant analysis |
Journal of medical virology |
High |
38009611
|
| 2024 |
MORC3 knockdown in head and neck cancer cells significantly upregulates PD-L1 and STAT1 expression, as well as multiple IFN-associated genes, and promotes cancer cell proliferation. MORC3 knockdown also upregulates the immune-related lncRNA LINC00880, and silencing LINC00880 attenuates PD-L1 expression, placing LINC00880 downstream of MORC3 in PD-L1 regulation. |
RNAi knockdown, RNA-seq, qRT-PCR, LINC00880 silencing epistasis |
Frontiers in cell and developmental biology |
Low |
39329063
|
| 2026 |
MORC3 restricts chromatin accessibility at tandem repeat elements harboring homotypic transcription factor motif clusters (including 45 PU.1 binding sites). Upon MORC3 loss, one such element becomes a potent IFNB1 enhancer. PU.1 recruits MORC3 to repress this enhancer by also recruiting DAXX and enabling H3.3 incorporation. Upon MORC3 loss, PU.1 drives IRF3/7-independent IFN induction via this tandem repeat enhancer. |
ATAC-seq, ChIP-seq, CRISPR deletion of tandem repeat, transcription factor motif analysis, DAXX interaction, H3.3 incorporation assays |
The EMBO journal |
High |
42249047
|
| 2025 |
MORC3 is expressed in the thymus and its loss of function causes a severe arrest in T cell development at the DN1 stage, with expansion of NK and myeloid cells. MORC3 function in the thymus requires both its ATPase activity and H3K4me3-binding CW domain. Altered chromatin accessibility at regulatory elements of key T cell transcription factors (including TCF1) is observed in DN1 cells; re-expressing TCF1 in MORC3-deficient progenitors rescues T cell development. |
Morc3 loss-of-function mouse model, flow cytometry, ATAC-seq, TCF1 rescue experiment, ATPase and CW domain mutants |
bioRxivpreprint |
Medium |
bio_10.1101_2025.03.05.641591
|