Affinage

MAP7D1

MAP7 domain-containing protein 1 · UniProt Q3KQU3

Length
841 aa
Mass
92.8 kDa
Annotated
2026-06-10
13 papers in source corpus 8 papers cited in narrative 8 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

MAP7D1 is a microtubule-associated protein that stabilizes specialized microtubule subpopulations and organizes kinesin-1-dependent transport along them [PMID:35470240, PMID:bio_10.1101_2025.10.07.680844]. It is required for maintenance of acetylated, stable microtubules through a mechanism distinct from its paralog MAP7D2, and a microtubule-binding-domain mutation (R201W) that abolishes microtubule association reduces microtubule density and produces mitotic defects including unstable spindles, lagging chromosomes, and shortened inter-centrosomal distance, establishing its role in spindle integrity (PMID:35470240, PMID:40856631). MAP7D1 partitions selectively onto detyrosinated microtubules to create tracks for kinesin-1 (KIF5B), and its microtubule density is tuned by nutrient state to control lysosome positioning—high density during starvation drives perinuclear clustering, while reduced density permits peripheral lysosome migration [PMID:bio_10.1101_2025.10.07.680844]. In neurons, DCLK1 directly phosphorylates MAP7D1 at Ser315 to promote callosal axon elongation (PMID:27503845), and MAP7D1 binds Disheveled to direct its cortical localization and couple microtubule plus-end targeting to Wnt5a signaling in a KIF5B-dependent feedback loop (PMID:29880710). Beyond cytoskeletal roles, MAP7D1 interacts with the DNA double-strand break repair factors RAD50, BRCA1, and 53BP1 and supports G1-phase repair by promoting RAD50 chromatin recruitment and 53BP1 focus formation (PMID:36852271), and it localizes to sarcomeres where its loss exacerbates doxorubicin-induced cardiomyopathy through impaired autophagic clearance and protein aggregation (PMID:34327238).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2016 High

    Established MAP7D1 as a regulated effector in neuronal cytoskeletal remodeling by identifying it as a DCLK1 kinase substrate whose phosphorylation drives axon elongation.

    Evidence Proteomic substrate identification, in vitro kinase assay, phosphomimetic mutagenesis, and in utero electroporation rescue in cortical neurons

    PMID:27503845

    Open questions at the time
    • Does not define how Ser315 phosphorylation alters MAP7D1 microtubule binding or kinesin recruitment
    • Limited to callosal axon elongation; broader neuronal contexts untested
  2. 2018 High

    Linked MAP7D1 to non-canonical Wnt signaling by showing it binds Disheveled and couples microtubule plus-end cortical targeting to Wnt5a via kinesin-1.

    Evidence Reciprocal Co-IP, live-cell imaging, siRNA knockdown of MAP7/MAP7D1/KIF5B in HeLa, and Drosophila Ensconsin/Disheveled genetics

    PMID:29880710

    Open questions at the time
    • Direct vs. indirect nature of the Disheveled interaction not resolved structurally
    • Functional consequence of the MAP7D1–Disheveled feedback loop on downstream Wnt output not quantified
  3. 2021 Medium

    Identified a sarcomeric/cardioprotective role, showing map7d1b loss worsens doxorubicin cardiomyopathy via failed autophagic degradation and protein aggregation.

    Evidence Zebrafish loss-of-function with doxorubicin model, autophagy flux and aggregation assays, mouse expression validation

    PMID:34327238

    Open questions at the time
    • Mechanism connecting sarcomeric MAP7D1 to autophagy is not molecularly defined
    • Human cardiac relevance untested
  4. 2022 Medium

    Defined MAP7D1's distinct microtubule-stabilizing mechanism—maintenance of acetylated stable microtubules—differentiating it from the acetylation-independent paralog MAP7D2.

    Evidence siRNA knockdown, nocodazole resistance, immunofluorescence for acetylated/detyrosinated tubulin, neurite outgrowth and migration assays in N1-E115 cells

    PMID:35470240

    Open questions at the time
    • Molecular basis for preference toward acetylated microtubules not established
    • Single neuronal cell line
  5. 2023 Medium

    Expanded MAP7D1's role beyond the cytoskeleton by tying it to G1-phase DNA double-strand break repair through RAD50, BRCA1, and 53BP1.

    Evidence Quantitative interaction proteomics, siRNA knockdown, γ-irradiation, chromatin fractionation, 53BP1 foci imaging, cell-cycle flow cytometry, p53 phosphorylation western blot

    PMID:36852271

    Open questions at the time
    • Whether MAP7D1 acts at damage sites directly or via cytoskeletal/cell-cycle effects is unresolved
    • Interactions discovered by proteomics lack reciprocal binding validation
  6. 2025 Medium

    Demonstrated MAP7D1 is required for mitotic spindle integrity by showing the microtubule-binding R201W mutation reproduces depletion phenotypes—unstable spindles, lagging chromosomes, and RPS14 mislocalization.

    Evidence Patient fibroblast analysis, wild-type vs. mutant overexpression, siRNA knockdown, spindle and microtubule density imaging in glioblastoma and HEK293T cells

    PMID:40856631

    Open questions at the time
    • Disease genotype-phenotype link from a single patient mutation
    • Significance of RPS14 accumulation not mechanistically explained
  7. 2025 Medium

    Resolved how MAP7D1 enables selective transport, showing it partitions onto detyrosinated/expanded-lattice microtubules to build kinesin-1 tracks and tunes lysosome positioning to nutrient state.

    Evidence Live-cell imaging, overexpression/knockdown, kinesin co-localization, lysosome tracking, nutrient starvation/refeeding, projection-domain mutagenesis (preprint)

    PMID:bio_10.1101_2025.10.07.680844

    Open questions at the time
    • Preprint, not yet peer-reviewed
    • Signaling pathway sensing nutrients to alter MAP7D1 microtubule density not identified
  8. 2026 Medium

    Placed MAP7D1 in a cancer radioresponse axis as a direct miR-423-5p target whose suppression reduces proliferation and promotes apoptosis during radiotherapy.

    Evidence Dual-luciferase 3'UTR reporter, exosome-delivered miR-423-5p mimic, CCK8 proliferation, apoptosis flow cytometry, xenograft model in esophageal cancer

    PMID:42120691

    Open questions at the time
    • Which MAP7D1 function (spindle, repair, transport) underlies the radioresponse phenotype is unknown
    • Single tumor type

Open questions

Synthesis pass · forward-looking unresolved questions
  • How MAP7D1's distinct activities—microtubule stabilization, kinesin-1 track formation, DSB repair, and sarcomeric maintenance—are coordinated or selected within a cell remains unresolved.
  • No structural model of the microtubule-binding or projection domains
  • No unified mechanism linking cytoskeletal and DNA-repair functions

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 3
Localization
GO:0005856 cytoskeleton 3 GO:0005815 microtubule organizing center 1
Pathway
R-HSA-1640170 Cell Cycle 1 R-HSA-5653656 Vesicle-mediated transport 1 R-HSA-73894 DNA Repair 1

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2016 DCLK1 directly phosphorylates MAP7D1 at serine 315 to promote axon elongation in cortical neurons. Knockdown of MAP7D1 impairs callosal axon elongation but not radial migration; overexpression of a phosphomimetic MAP7D1 S315E mutant rescues axon elongation defects in Dclk1 knockdown neurons, whereas wild-type MAP7D1 does not. Proteomic identification of DCLK1 substrate; in vitro phosphorylation assay; phosphomimetic/phosphodead mutagenesis; in utero electroporation knockdown with rescue experiments Developmental neurobiology High 27503845
2018 MAP7D1 (and its paralog MAP7) bind to Disheveled, direct its cortical localization, and facilitate cortical targeting of microtubule plus-ends in response to Wnt5a signaling. Wnt5a signaling promotes MAP7D1 movement toward MT plus-ends, and this dynamics and Disheveled localization depend on kinesin-1 member KIF5B. Disheveled in turn stabilizes MAP7D1, forming a feedback loop. Co-immunoprecipitation; live-cell imaging; siRNA knockdown of MAP7, MAP7D1, and KIF5B; cortical localization assays in HeLa cells; Drosophila genetic analysis of Ensconsin (ortholog) and Disheveled EMBO reports High 29880710
2022 MAP7D1 stabilizes microtubules through a mechanism distinct from its paralog MAP7D2: MAP7D1 is required for maintenance of acetylated (stable) microtubules, whereas MAP7D2 stabilizes MTs via direct binding independent of acetylation. Both proteins show similar subcellular localization (centrosome and partially on MTs) and knockdown phenotypes in neuronal cells affecting cell motility and neurite outgrowth. siRNA knockdown; nocodazole resistance assay; immunofluorescence for acetylated/detyrosinated tubulin; neurite outgrowth and cell migration assays in mouse N1-E115 neuronal cells Life science alliance Medium 35470240
2023 MAP7D1 interacts with DNA double-strand break repair proteins RAD50, BRCA1, and 53BP1. Downregulation of MAP7D1 causes strong G1 arrest and impairs DNA repair in G1-arrested cells, reducing RAD50 recruitment to chromatin and 53BP1 localization to damage sites, and increases p53 phosphorylation after γ-irradiation. Quantitative proteomics (interaction); siRNA knockdown; γ-irradiation; chromatin fractionation; immunofluorescence for 53BP1 foci; flow cytometry for cell cycle; western blot for p53 phosphorylation iScience Medium 36852271
2021 MAP7D1 (map7d1b in zebrafish) localizes to sarcomeres in cardiac and skeletal muscle. Disruption of map7d1b gene function exacerbates doxorubicin-induced cardiomyopathy, mechanistically conveyed by impaired autophagic degradation and elevated protein aggregation. Zebrafish genetic knockdown/knockout; doxorubicin treatment model; immunofluorescence for sarcomeric localization; autophagy flux assays; protein aggregation assays; expression validation in mice BioMed research international Medium 34327238
2025 A MAP7D1 microtubule-binding domain mutation (R201W) disrupts MAP7D1 interaction with microtubules, causing reduced microtubule density, mitotic defects (multipolar/bipolar unstable spindles, lagging chromosomes, shortened inter-centrosomal distance), and RPS14 accumulation in incorrectly dividing cells. Overexpression of mutant MAP7D1 and MAP7D1 depletion in glioblastoma and HEK293T cells reproduce these phenotypes, confirming loss-of-function. Patient fibroblast analysis; overexpression of wild-type vs. mutant MAP7D1; siRNA knockdown; immunofluorescence for microtubule density and mitotic spindles; RPS14 localization Disease models & mechanisms Medium 40856631
2025 MAP7D1 selectively partitions onto detyrosinated microtubules (via expanded lattice states), creating specialized tracks for kinesin-1 (KIF5B). MAP7D1 density on microtubules increases during nutrient starvation and decreases upon nutrient stimulation, thereby controlling lysosome positioning: high MAP7D1 density localizes lysosomes perinuclearly (starvation), while reduced MAP7D1 density allows peripheral lysosome migration (nutrient repletion). Altered MAP7D1 levels impair lysosomal motility and nutrient signaling responsiveness. Live-cell imaging; MAP7D1 overexpression and knockdown; rigor kinesin co-localization assays; lysosome tracking; nutrient starvation/re-feeding experiments; projection-domain mutagenesis for MAP4 specificity bioRxivpreprint Medium bio_10.1101_2025.10.07.680844
2026 MAP7D1 is a direct target of miR-423-5p, as confirmed by dual-luciferase reporter assay at the MAP7D1 3'UTR. Inhibition of MAP7D1 via miR-423-5p reduces tumor cell proliferation and increases apoptosis in esophageal cancer cells during radiotherapy. Dual-luciferase reporter assay; miR-423-5p mimic overexpression via engineered exosomes; CCK8 proliferation assay; flow cytometric apoptosis assay; xenograft mouse model Annals of surgical oncology Medium 42120691

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2000 The nuclear import of RCC1 requires a specific nuclear localization sequence receptor, karyopherin alpha3/Qip. The Journal of biological chemistry 56 10744690
2016 DCLK1 phosphorylates the microtubule-associated protein MAP7D1 to promote axon elongation in cortical neurons. Developmental neurobiology 37 27503845
2021 Emergence of unique SARS-CoV-2 ORF10 variants and their impact on protein structure and function. International journal of biological macromolecules 22 34863825
2023 Repair mechanism of Yishen Tongluo formula on mouse sperm DNA fragmentation caused by polystyrene microplastics. Pharmaceutical biology 18 36895195
2018 Map7/7D1 and Dvl form a feedback loop that facilitates microtubule remodeling and Wnt5a signaling. EMBO reports 17 29880710
2019 Characterization of whole blood transcriptome and early-life fecal microbiota in high and low responder pigs before, and after vaccination for Mycoplasma hyopneumoniae. Vaccine 16 30808565
2021 Genome-wide 5-Hydroxymethylcytosine Profiling Analysis Identifies MAP7D1 as A Novel Regulator of Lymph Node Metastasis in Breast Cancer. Genomics, proteomics & bioinformatics 14 33716151
2023 Microtubule-associated proteins MAP7 and MAP7D1 promote DNA double-strand break repair in the G1 cell cycle phase. iScience 10 36852271
2022 Map7D2 and Map7D1 facilitate microtubule stabilization through distinct mechanisms in neuronal cells. Life science alliance 9 35470240
2023 Identification of Rare Variants Involved in High Myopia Unraveled by Whole Genome Sequencing. Ophthalmology science 8 37250922
2021 Disruption of MAP7D1 Gene Function Increases the Risk of Doxorubicin-Induced Cardiomyopathy and Heart Failure. BioMed research international 6 34327238
2026 Engineered Exosomes for Delivery of Mir-423-5p to Improve Radiation Sensitivity by Inhibiting MAP7D1 in Esophageal Cancer. Annals of surgical oncology 0 42120691
2025 A novel MAP7D1 mutation causes mitotic defects and RPS14 accumulation in Shwachman-Diamond syndrome patient cells. Disease models & mechanisms 0 40856631

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