Affinage

ITIH1

Inter-alpha-trypsin inhibitor heavy chain H1 · UniProt P19827

Round 2 corrected
Length
911 aa
Mass
101.4 kDa
Annotated
2026-04-28
47 papers in source corpus 14 papers cited in narrative 14 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ITIH1 encodes heavy chain H1 of the inter-alpha-trypsin inhibitor (ITI) complex, a liver-expressed secreted glycoprotein that is assembled with heavy chain H2 and bikunin via a chondroitin sulfate cross-link and functions primarily in extracellular matrix organization through covalent transfer to hyaluronan (PMID:2476436, PMID:7592891). The C-terminal Asp of ITIH1 is esterified to an internal N-acetylglucosamine of hyaluronan chains, a transfer catalyzed by TSG-6, which also liberates free bikunin as an active serine protease inhibitor; pentraxin 3 (PTX3) binds the ITI heavy chains to cooperatively organize hyaluronan matrices essential for processes such as cumulus oophorus expansion (PMID:7592891, PMID:16873769, PMID:17675295). As a secreted protein, ITIH1 also acts as an integrin α5β1 ligand that competes with fibronectin to suppress FAK signaling, and its expression is negatively regulated both epigenetically by KDM5C-mediated H3K4me1 demethylation and post-transcriptionally by TGF-β-driven METTL3 m6A modification, with loss of ITIH1 activating NF-κB and PI3K/AKT pathways to promote hepatocellular and renal cell carcinoma progression (PMID:39234824, PMID:35080113, PMID:39091412).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 1987 High

    Resolving the long-standing question of whether ITI is a single polypeptide or a multi-component complex, cDNA cloning demonstrated that ITIH1 is a distinct heavy chain encoded by its own mRNA and expressed exclusively in liver, establishing the multi-gene architecture of the ITI system.

    Evidence cDNA cloning, RNA blot, cell-free translation, partial amino acid sequencing from two independent groups

    PMID:2446322 PMID:3663330

    Open questions at the time
    • No functional assay for isolated H1 chain
    • Post-translational assembly mechanism unknown
  2. 1989 High

    The molecular basis of ITI assembly was established: H1 and H2 are joined to bikunin not by peptide bonds but via a glycosaminoglycan (chondroitin sulfate) cross-link, explaining the unusual multi-chain architecture and sensitivity to hyaluronidase/chemical deglycosylation.

    Evidence SDS-PAGE, trifluoromethanesulfonic acid treatment, hyaluronidase digestion of purified plasma ITI

    PMID:2476436

    Open questions at the time
    • Precise chemical nature of the glycan–protein bond not yet resolved
    • Assembly pathway in hepatocytes unknown
  3. 1993 High

    The extracellular function of ITIH1 was reframed when its gene product was identified as the serum-derived hyaluronan-associated protein (SHAP), demonstrating that HC1 is covalently transferred from ITI to hyaluronan chains, with the HA-binding determinant mapped to the C-terminal half of the protein.

    Evidence Protein sequencing of HA-lyase-released peptides, Western blot with anti-ITI antibodies, in vitro incubation of serum with exogenous HA

    PMID:7504674

    Open questions at the time
    • Enzyme or catalyst mediating the transfer not identified
    • Structural basis of C-terminal HA binding unresolved
  4. 1995 High

    The atomic-level linkage chemistry was defined: the C-terminal Asp of HC1/ITIH1 forms an ester bond to the C6-hydroxyl of an internal GlcNAc residue in the hyaluronan chain, providing the precise covalent mechanism for HA cross-linking.

    Evidence ESI-MS/MS and CID-MS/MS of thermolysin-digested SHAP·HA complex from human synovial fluid

    PMID:7592891

    Open questions at the time
    • Transferase catalyzing the ester bond formation not yet identified
    • Reversibility and turnover of the linkage unknown
  5. 2006 High

    TSG-6 was identified as the catalyst that forms covalent intermediates with ITI heavy chains including HC1, driving their transfer to HA and simultaneously releasing free bikunin as an active serine protease inhibitor, connecting ITIH1 metabolism to airway antiprotease defense.

    Evidence Immunoprecipitation from bronchoalveolar lavage fluid, in vitro reconstitution with purified TSG-6/ITI, primary human airway epithelial cells with TNF-α/IL-1β stimulation

    PMID:16873769

    Open questions at the time
    • Catalytic mechanism of TSG-6 in transesterification not structurally resolved
    • Whether TSG-6 is the sole catalyst in all tissues unknown
  6. 2007 High

    PTX3 was shown to directly bind ITI heavy chains (including HC1) through its N-terminal domain, and this interaction is required for organizing hyaluronan matrices in the cumulus oophorus, as demonstrated by rescue of the Ptx3-knockout matrix-assembly defect and blockade by an anti-PTX3 antibody.

    Evidence Co-IP from cumulus matrix, solid-phase binding with purified proteins, PTX3 domain mapping, Ptx3−/− cumulus culture rescue, blocking antibody

    PMID:17675295

    Open questions at the time
    • Stoichiometry of the PTX3–HC1 complex on HA not determined
    • Whether PTX3 interaction is required for HA stabilization beyond cumulus matrix unknown
  7. 2022 Medium

    Epigenetic regulation of ITIH1 was established: KDM5C silences ITIH1 transcription by demethylating H3K4me1 at its promoter in HCC cells, and double-knockdown epistasis showed that ITIH1 loss downstream of KDM5C reactivates PI3K/AKT signaling and restores malignant behavior.

    Evidence siRNA KD of KDM5C, ChIP for H3K4me1 at ITIH1 promoter, KDM5C/ITIH1 double KD epistasis, xenograft tumor model

    PMID:35080113

    Open questions at the time
    • Whether KDM5C is recruited to ITIH1 promoter by a specific transcription factor is unknown
    • Single-lab finding; independent replication needed
    • Direct protein-level readout of ITIH1 secretion after KDM5C manipulation not shown
  8. 2024 High

    ITIH1 was shown to function as a secreted integrin α5β1 ligand that competes with fibronectin to suppress FAK signaling in HCC, while TGF-β promotes METTL3 phase separation to m6A-modify ITIH1 mRNA and reduce its stability, providing a unified post-transcriptional and signaling mechanism for ITIH1 tumor suppression.

    Evidence Co-IP/binding assays for ITIH1–integrin α5β1, fibronectin competition, FAK phosphorylation, m6A-seq/MeRIP, METTL3 phase-separation imaging, in vivo HCC model, patient-derived organoids and xenografts, recombinant ITIH1 treatment

    PMID:39234824

    Open questions at the time
    • Structural basis of ITIH1–integrin α5β1 binding versus the established HA-ester function not reconciled
    • Whether integrin antagonism is independent of HA binding unknown
  9. 2024 Medium

    ITIH1 was independently shown to suppress RCC progression via negative regulation of NF-κB signaling, with pharmacological rescue by the NF-κB inhibitor JSH-23 confirming pathway epistasis.

    Evidence siRNA KD and overexpression in RCC cell lines, Western blot for NF-κB pathway, proliferation/invasion assays, JSH-23 pharmacological rescue

    PMID:39091412

    Open questions at the time
    • Mechanism by which a secreted protein inhibits intracellular NF-κB not defined
    • No in vivo model provided
    • Relationship between NF-κB suppression and integrin/FAK pathway unclear

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include the structural basis for ITIH1's dual roles in HA cross-linking and integrin antagonism, how secreted ITIH1 accesses intracellular NF-κB signaling, and whether the tumor-suppressive function operates through the same C-terminal domain responsible for HA esterification.
  • No high-resolution structure of ITIH1 or ITIH1–HA complex
  • No genetic loss-of-function animal model for ITIH1
  • Relationship between HA stabilization and tumor-suppressive signaling unexplored

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098631 cell adhesion mediator activity 3 GO:0098772 molecular function regulator activity 3
Localization
GO:0005576 extracellular region 4 GO:0031012 extracellular matrix 3
Pathway
R-HSA-1474244 Extracellular matrix organization 3 R-HSA-1643685 Disease 3 R-HSA-162582 Signal Transduction 2
Complex memberships
Inter-alpha-trypsin inhibitor (ITI; H1-H2-bikunin)SHAP·HA complex

Evidence

Reading pass · 14 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1987 ITIH1 (heavy chain H1 of inter-alpha-trypsin inhibitor) was characterized by cDNA cloning, establishing that human ITI is a multipolypeptide complex composed of distinct heavy chains (H1, H2) and a light chain synthesized from separate mRNAs, with the H1 chain (~90–95 kDa) expressed exclusively in liver. The deduced H1 amino acid sequence revealed potential calcium-binding sites and regions homologous to thiol-proteinase inhibitor reactive sites. cDNA cloning, RNA blot analysis, cell-free translation of hybrid-selected mRNA, partial amino acid sequencing of purified protein Proceedings of the National Academy of Sciences of the United States of America High 2446322
1987 cDNA library screening with anti-ITI antibodies resolved ITI into three distinct protein components; cDNA groups 2 and 3 (corresponding to heavy chains including H1) are distantly related to each other but unrelated to the bikunin/UTI light-chain component, confirming ITI is a multi-component complex rather than a single-chain protein. cDNA expression library screening, partial amino acid sequencing of purified serum ITI, sequence comparison Biological chemistry Hoppe-Seyler High 3663330
1989 ITI was shown to consist of two distinct proteins (225 kDa inter-alpha-TI containing heavy chains H1 [65 kDa] and H2 [70 kDa], and 125 kDa pre-alpha-TI containing H3 [90 kDa]), all sharing a single identical trypsin-inhibitory light chain (bikunin, 30 kDa). The multiple polypeptide chains within each complex are assembled by a glycan linkage (sensitive to trifluoromethanesulfonic acid and hyaluronidase), not by peptide bonds. Biochemical fractionation, SDS-PAGE, agarose gel electrophoresis, chemical denaturation, trifluoromethanesulfonic acid treatment, hyaluronidase digestion The Journal of biological chemistry High 2476436
1989 ITIH1 and ITIH3 genes are co-localized to chromosome 3p21.1–21.2, while ITIH2 maps to chromosome 10p15 and the light-chain (bikunin/AMBP) gene to chromosome 9q32–33. This established that inter-alpha-trypsin inhibitor is encoded by at least four genes on three different chromosomes. In situ hybridization chromosomal localization, Northern analysis, cell-free translation of hybrid-selected poly(A)+ RNA European journal of biochemistry High 2465147
1993 The heavy chains of ITI, including HC1 (the ITIH1 gene product), were identified as the serum-derived hyaluronan-associated proteins (SHAP) that become covalently linked to hyaluronan synthesized by fibroblasts. The HA-binding domain was mapped to the C-terminal half of HC1, which contains an amphipathic alpha-helix structure. Amino acid sequence of SHAP peptides showed essentially 100% identity with HC1 (human). Protein sequencing of HA-lyase-released peptides and V8 protease fragments, SDS-PAGE, Western blot with anti-ITI antibodies, bovine and human serum incubation with exogenous HA The Journal of biological chemistry High 7504674
1994 A chondroitin sulphate chain covalently cross-links all three polypeptide chains of ITI (bikunin, H1, and H2) via a protein-glycosaminoglycan-protein cross-link. Thermolysin digestion and mass spectrometry of the glycosaminoglycan-containing fragment confirmed the covalent assembly. Thermolysin digestion, ion-exchange chromatography, peptide sequencing, mass spectrometry European journal of biochemistry High 7513643
1995 The C-terminal Asp residue of ITIH1 (HC1) is esterified to the C6-hydroxyl of an internal N-acetylglucosamine residue within the hyaluronan chain, establishing the precise covalent linkage chemistry between ITIH1 and hyaluronan. Equivalent linkages were identified for HC2 and HC3 at their respective C-terminal Asp residues. Thermolysin digestion of SHAP·HA complex from synovial fluid, CsCl gradient centrifugation, chondroitinase AC II digestion, reverse-phase HPLC, protein N-terminal sequencing, electrospray ionization MS, CID-MS/MS The Journal of biological chemistry High 7592891
1997 The null allele ITIH1*Q0iwate results from deletion of a single nucleotide in the codon for Lys87, causing a frameshift and a premature termination codon that truncates the ITIH1 protein at amino acid 128, producing a non-functional truncated protein. SSCP analysis, direct DNA sequencing of genomic ITIH1 The Japanese journal of human genetics Medium 9290263
2006 TSG-6 forms covalent complexes with the heavy chains (HCs) of ITI including HC1/ITIH1, and these TSG-6·HC complexes cause release of free bikunin from the ITI complex. Free bikunin, but not HC-associated bikunin, functions as a relevant tissue kallikrein inhibitor in airway secretions, demonstrating that TSG-6-mediated heavy-chain transfer modulates the antiprotease activity of the ITI system. Immunoprecipitation from bronchoalveolar lavage fluid, in vitro reconstitution with purified components, primary cultures of human airway epithelial cells, TNF-α/IL-1β induction experiments American journal of respiratory cell and molecular biology High 16873769
2007 Pentraxin 3 (PTX3) directly interacts with the heavy chains of ITI (including HC1/ITIH1) but not with bikunin, and this interaction is mediated by the N-terminal domain of PTX3. The PTX3–HC interaction is required for organizing hyaluronan in the cumulus oophorus extracellular matrix, as shown by rescue of the Ptx3-knockout phenotype in vitro; a monoclonal antibody blocking PTX3/ITI-HC interaction also prevents HA matrix formation. Coimmunoprecipitation from cumulus matrix extracts, solid-phase binding assay with purified proteins, recombinant PTX3 domain mapping, in vitro culture of Ptx3-/- cumulus cell-oocyte complexes, blocking antibody experiments The Journal of biological chemistry High 17675295
2008 ITIH1 (along with other ITIH family members) is expressed in multiple normal tissues and is frequently downregulated in multiple human solid tumors including breast, colon, and lung cancer, consistent with a role as a putative tumor suppressor. ITIH proteins contribute to ECM stability through covalent linkage to hyaluronan. cDNA dot blot (Cancer Profiling Array), semiquantitative RT-PCR, immunohistochemistry on tissue microarray BMC cancer Low 18226209
2022 KDM5C (a lysine demethylase) epigenetically silences ITIH1 transcription by regulating H3K4me1 modification at the ITIH1 promoter in liver hepatocellular carcinoma (LIHC) cells. KDM5C knockdown increases ITIH1 expression; subsequent ITIH1 knockdown rescues malignant behaviors and restores PI3K/AKT signaling activity, placing ITIH1 downstream of KDM5C as a suppressor of PI3K/AKT pathway activation. siRNA knockdown of KDM5C, ChIP for H3K4me1 at ITIH1 promoter, Western blot for PI3K/AKT signaling components, xenograft tumor model, double-knockdown epistasis (KDM5C KD + ITIH1 KD) The Kaohsiung journal of medical sciences Medium 35080113
2024 ITIH1 functions as a secreted ligand of integrin α5β1, antagonizing fibronectin binding to this receptor and thereby inhibiting focal adhesion kinase (FAK) signaling to suppress HCC progression. TGF-β promotes liquid-phase separation of the m6A writer METTL3, reducing ITIH1 mRNA stability via m6A modification. Recombinant ITIH1 (r-ITIH1) protein inhibits HCC in mouse models, patient-derived organoids, and patient-derived xenografts, and synergizes with TGF-β inhibitors. Co-IP/binding assays for ITIH1–integrin α5β1 interaction, fibronectin competition assays, FAK phosphorylation measurement, METTL3 phase-separation imaging, m6A-seq/MeRIP for ITIH1 mRNA, in vivo mouse HCC model, patient-derived organoids and xenografts, recombinant protein administration Advanced science (Weinheim, Baden-Wurttemberg, Germany) High 39234824
2024 ITIH1 suppresses renal cell carcinoma (RCC) progression by inhibiting the NF-κB signaling pathway. ITIH1 knockdown in RCC cells increased phospho-NF-κB, decreased IκB, increased IKK, Cyclin D1, PCNA, and α-SMA, and enhanced cell proliferation and invasion; these effects were reversed by the NF-κB inhibitor JSH-23, placing ITIH1 upstream of NF-κB as a negative regulator. siRNA knockdown and overexpression of ITIH1 in RCC cell lines, Western blotting for NF-κB pathway components, proliferation and invasion assays, pharmacological rescue with JSH-23 Experimental and therapeutic medicine Medium 39091412

Source papers

Stage 0 corpus · 47 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Biological insights from 108 schizophrenia-associated genetic loci. Nature 5878 25056061
2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America 1479 12477932
2013 Genome-wide association analysis identifies 13 new risk loci for schizophrenia. Nature genetics 1192 23974872
2003 Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry. Nature biotechnology 1176 12754519
2011 Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. Nature genetics 1068 21926972
2015 A human interactome in three quantitative dimensions organized by stoichiometries and abundances. Cell 1015 26496610
2021 Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell 705 33961781
2004 The human plasma proteome: a nonredundant list developed by combination of four separate sources. Molecular & cellular proteomics : MCP 658 14718574
2011 Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in bioinformatics 656 21873635
2004 The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome research 438 15489334
2005 Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Genome research 409 16344560
2004 An investigation into the human serum "interactome". Electrophoresis 247 15174051
2009 Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry. Proceedings of the National Academy of Sciences of the United States of America 237 19416921
2014 Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver. BMC cancer 203 25037231
2017 Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics. Journal of proteome research 185 28675934
1989 Analysis of inter-alpha-trypsin inhibitor and a novel trypsin inhibitor, pre-alpha-trypsin inhibitor, from human plasma. Polypeptide chain stoichiometry and assembly by glycan. The Journal of biological chemistry 183 2476436
2008 Frequent expression loss of Inter-alpha-trypsin inhibitor heavy chain (ITIH) genes in multiple human solid tumors: a systematic expression analysis. BMC cancer 182 18226209
2014 Common variants near ABCA1, AFAP1 and GMDS confer risk of primary open-angle glaucoma. Nature genetics 179 25173105
1995 Evidence for the covalent binding of SHAP, heavy chains of inter-alpha-trypsin inhibitor, to hyaluronan. The Journal of biological chemistry 158 7592891
1993 A serum-derived hyaluronan-associated protein (SHAP) is the heavy chain of the inter alpha-trypsin inhibitor. The Journal of biological chemistry 157 7504674
2004 Screening for N-glycosylated proteins by liquid chromatography mass spectrometry. Proteomics 156 14760718
2013 In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine. Proteomics 138 23533145
2007 PTX3 interacts with inter-alpha-trypsin inhibitor: implications for hyaluronan organization and cumulus oophorus expansion. The Journal of biological chemistry 129 17675295
2013 Proteomic analysis of podocyte exosome-enriched fraction from normal human urine. Journal of proteomics 126 23376485
1989 Human plasma inter-alpha-trypsin inhibitor is encoded by four genes on three chromosomes. European journal of biochemistry 95 2465147
1987 Isolation and characterization of cDNAs encoding the heavy chain of human inter-alpha-trypsin inhibitor (I alpha TI): unambiguous evidence for multipolypeptide chain structure of I alpha TI. Proceedings of the National Academy of Sciences of the United States of America 93 2446322
2012 Proteomic analysis of microvesicles from plasma of healthy donors reveals high individual variability. Journal of proteomics 81 22516433
1994 Chondroitin sulphate covalently cross-links the three polypeptide chains of inter-alpha-trypsin inhibitor. European journal of biochemistry 71 7513643
1987 cDNA cloning of human inter-alpha-trypsin inhibitor discloses three different proteins. Biological chemistry Hoppe-Seyler 70 3663330
2006 TSG-6 potentiates the antitissue kallikrein activity of inter-alpha-inhibitor through bikunin release. American journal of respiratory cell and molecular biology 65 16873769
2019 Extracellular Hsp90α and clusterin synergistically promote breast cancer epithelial-to-mesenchymal transition and metastasis via LRP1. Journal of cell science 64 31273033
2002 Itih-4, a serine protease inhibitor regulated in interleukin-6-dependent liver formation: role in liver development and regeneration. Developmental dynamics : an official publication of the American Association of Anatomists 50 11803570
2011 ITIH-5 expression in human adipose tissue is increased in obesity. Obesity (Silver Spring, Md.) 31 21852814
2014 ITIH family genes confer risk to schizophrenia and major depressive disorder in the Han Chinese population. Progress in neuro-psychopharmacology & biological psychiatry 22 24389398
1998 Identification of mouse itih-4 encoding a glycoprotein with two EF-hand motifs from early embryonic liver. Biochimica et biophysica acta 13 9602042
2022 Lysine demethylase 5C epigenetically reduces transcription of ITIH1 that results in augmented progression of liver hepatocellular carcinoma. The Kaohsiung journal of medical sciences 12 35080113
2010 Kinetic mechanistic studies of Cdk5/p25-catalyzed H1P phosphorylation: metal effect and solvent kinetic isotope effect. Biochemistry 10 20491486
1988 Sst I RFLP in the human inter-alpha-trypsin inhibitor heavy chain gene ITIH1. Nucleic acids research 10 2463517
2024 m6A-Dependent ITIH1 Regulated by TGF-β Acts as a Target for Hepatocellular Carcinoma Progression. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 9 39234824
1989 An Apa I polymorphism for the human inter-alpha-trypsin inhibitor heavy chain gene ITIH1 on chromosome 3. Nucleic acids research 7 2470030
1994 The polymorphism of the plasma inter-alpha-trypsin inhibitor (ITI) and its relationship to the heavy chain H1 subunit gene (ITIH1) at 3p211-212. Human genetics 6 7518408
1989 Dra I polymorphism in the human inter-alpha-trypsin inhibitor heavy chain gene ITIH1. Nucleic acids research 6 2474799
2025 A Comprehensive Analysis of the ITIH Family Across Multiple Cancer Types and an Initial Investigation of ITIH1 in Gastric Cancer. Current medicinal chemistry 2 40820459
2024 ITIH1 suppresses carcinogenesis in renal cell carcinoma through regulation of the NF‑κB signaling pathway. Experimental and therapeutic medicine 2 39091412
1997 ITIH1*Q0iwate, a null allele of inter-alpha-trypsin inhibitor H1 caused by deletion/frameshift mutation. The Japanese journal of human genetics 2 9290263
2026 Integrative multi-omics implicates a CTSB/ITIH-ECM axis in autism spectrum disorder. Neurobiology of disease 0 42019823
2013 [Effect of Hanfangji compound on proliferation of hepatic stellate cells and expressions of TTR, ITIH1 and SERPINF2]. Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica 0 24422404