Affinage

HPX

Hemopexin · UniProt P02790

Round 2 corrected
Length
462 aa
Mass
51.7 kDa
Annotated
2026-04-28
41 papers in source corpus 6 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

Hemopexin (HPX) is a plasma glycoprotein that functions as the primary extracellular scavenger of free heme, preventing heme-driven Fenton-chemistry oxidative damage and enabling hepatocyte iron salvage. HPX is a single-chain, two-domain β-propeller protein (439 residues, six disulfide bridges) whose heme binding induces a conformational change at the inter-domain hinge, and the heme–HPX complex is internalized by hepatocytes via LRP-1/LRP-2 receptor-mediated endocytosis (PMID:3855550, PMID:12042069, PMID:17185359). HPX also physically associates with apoA-1-containing HDL particles in a haptoglobin-dependent manner, and this association modulates HDL inflammatory properties in atherosclerotic settings (PMID:19433579). Overexpression of HPX suppresses MAPK signaling and hepatocellular carcinoma cell proliferation in vitro and in vivo, indicating an additional role as a negative regulator of mitogenic signaling (PMID:40858030).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 1985 High

    Determination of the complete primary structure of HPX established its two-domain architecture arising from gene duplication and demonstrated that heme binding induces a conformational change at the inter-domain hinge, providing the first structural framework for understanding heme–HPX interaction.

    Evidence Complete protein sequencing (Edman degradation, tryptic peptide mapping) and limited proteolysis of apo- vs. heme-saturated HPX

    PMID:3855550

    Open questions at the time
    • Atomic-resolution crystal structure of the heme–HPX complex was not yet available
    • Identity of the hepatocyte receptor for heme–HPX complex was unknown
    • Stoichiometry and thermodynamics of heme binding were not precisely defined in this study
  2. 2002 High

    Consolidation of binding, uptake, and knockout studies established that HPX possesses the highest heme-binding affinity among plasma proteins and functions primarily as an antioxidant scavenger—not merely an iron transport protein—by delivering heme to hepatocytes via receptor-mediated endocytosis.

    Evidence Integration of binding affinity measurements, cell-based heme uptake assays, and HPX-knockout mouse phenotyping

    PMID:12042069

    Open questions at the time
    • Molecular identity of the hepatocyte receptor had been proposed but receptor-specific knockdown was not yet shown
    • Intracellular signaling events triggered upon heme–HPX endocytosis were incompletely mapped
  3. 2006 Medium

    Identification of LRP-1 (CD91) and LRP-2 (megalin) as the endocytic receptors for heme–HPX resolved the receptor question and revealed that the four-bladed β-propeller HPX domain is a conserved scaffold used across diverse proteins for ligand-receptor interactions.

    Evidence Domain structural analysis and receptor-binding assays with LRP-1/LRP-2

    PMID:17185359

    Open questions at the time
    • Relative contributions of LRP-1 vs. LRP-2 to hepatocyte heme uptake in vivo were not dissected
    • Whether HPX is recycled or degraded after receptor-mediated endocytosis remained debated
  4. 2009 Medium

    Discovery of HPX's physical association with HDL particles in a haptoglobin-dependent manner expanded the functional repertoire of HPX beyond heme scavenging, linking it to HDL inflammatory remodeling in atherosclerosis.

    Evidence Co-immunoprecipitation and HDL protein analysis in apoE−/− and Hp−/− mouse models and human coronary heart disease patients; apoA-1 mimetic peptide dissociation experiments

    PMID:19433579

    Open questions at the time
    • Direct binding interface between HPX and apoA-1 or other HDL components was not mapped
    • Whether HPX modifies HDL function independently of hemoglobin/haptoglobin cargo was unclear
    • Causal contribution of HPX–HDL association to atherogenesis was not tested in HPX-knockout models
  5. 2025 Medium

    Functional studies in hepatocellular carcinoma revealed that HPX negatively regulates MAPK signaling, suppressing tumor cell proliferation, migration, and drug resistance, extending HPX's biology into cancer-relevant pathways.

    Evidence HPX overexpression in HCC cell lines with Western blot for MAPK pathway components and in vivo mouse xenograft validation

    PMID:40858030

    Open questions at the time
    • Direct molecular target through which HPX inhibits MAPK activation was not identified
    • Whether this anti-tumor effect is heme-binding-dependent or independent was not tested
    • Findings have not been replicated in independent cohorts or labs

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include the precise mechanism by which HPX engages the Nrf2/HO-1 antioxidant axis, whether HPX's roles in MAPK suppression and HDL remodeling are mechanistically linked to its heme-binding function, and the structural basis for receptor selectivity between LRP-1 and LRP-2.
  • HPX–Nrf2 pathway placement relies on proteomics and docking without direct interaction validation
  • No structure of full-length HPX in complex with LRP-1 or LRP-2 exists
  • Heme-binding-dependent vs. -independent functions of HPX have not been systematically dissected

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008289 lipid binding 3 GO:0016209 antioxidant activity 2 GO:0140104 molecular carrier activity 2 GO:0098772 molecular function regulator activity 1
Localization
GO:0005576 extracellular region 3
Pathway
R-HSA-382551 Transport of small molecules 2 R-HSA-162582 Signal Transduction 1
Partners

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1985 Human hemopexin (HPX) is a single polypeptide chain of 439 amino acid residues (Mr ~63,000) with six intrachain disulfide bridges, an O-linked galactosamine oligosaccharide blocking the N-terminal threonine, and five N-linked glucosamine oligosaccharides. Internal sequence homology analysis revealed that HPX consists of two similar halves arising from ancestral gene duplication. Limited tryptic digestion mapped the hinge region (histidine-rich, linker between the two half-molecules) and showed that heme binding occludes the trypsin cleavage site at lysine-101, indicating a conformational change upon heme binding. Complete protein sequencing (tryptic peptide mapping, Edman degradation), computer-assisted internal homology analysis, limited proteolysis of apo- vs. heme-saturated HPX Proceedings of the National Academy of Sciences of the United States of America High 3855550
2002 HPX is the plasma protein with the highest known heme-binding affinity. It functions primarily as an antioxidant scavenger: free heme intercalates into lipid membranes and generates hydroxyl radicals via Fenton chemistry, and HPX prevents this by tightly binding heme and delivering the heme-HPX complex to hepatocytes via a specific heme-HPX receptor. Receptor-mediated endocytosis of the complex triggers intracellular antioxidant responses and enables iron salvage, establishing that HPX's dominant physiological role is antioxidant defense rather than primary iron metabolism. Review integrating binding affinity measurements, receptor identification experiments, cell-based heme uptake assays, and HPX-knockout mouse studies DNA and cell biology High 12042069
2006 The two four-bladed β-propeller hemopexin domains of HPX serve as multifunctional liganding modules. These domains mediate heme binding, endocytosis via LRP-1 (CD91) and LRP-2 (megalin/GP330) receptors, and the same structural fold is used in MMPs and vitronectin for substrate binding, MMP activation/inhibition, and dimerization—establishing that the HPX domain architecture is a conserved scaffold for diverse ligand-receptor interactions. Domain structural analysis, receptor-binding assays (LRP-1/LRP-2), domain-swapping experiments across HPX-domain-containing proteins Journal of leukocyte biology Medium 17185359
2009 Hemopexin (HPX/Hx) physically associates with apoA-1-containing HDL particles in both atherogenic mouse models and coronary heart disease patients. This association is dependent on the presence of haptoglobin (Hp), as HDL from Hp−/− mice under atherogenic conditions does not accumulate hemoglobin and remains anti-inflammatory. The Hb×Hp×Hx complex on HDL correlates with pro-inflammatory properties, and treatment with an apoA-1 mimetic peptide dissociates these complexes and restores HDL anti-inflammatory function. Co-immunoprecipitation/pulldown, HDL isolation and protein association analysis in mouse models (apoE−/−, Hp−/−) and human CHD patients, apoA-1 mimetic peptide treatment experiments The Journal of biological chemistry Medium 19433579
2025 HPX suppresses hepatocellular carcinoma (HCC) cell proliferation, migration, invasion, and lenvatinib resistance. Mechanistically, phthalate exposure activates the MAPK signaling pathway, and HPX overexpression inhibits this MAPK activation. This HPX-MAPK axis was confirmed by Western blot in cell lines and validated in vivo in mouse models, identifying HPX as a negative regulator of MAPK signaling in HCC. HPX overexpression functional assays (proliferation, migration, invasion, drug resistance), Western blot for MAPK pathway components, in vivo mouse xenograft models, molecular docking Ecotoxicology and environmental safety Medium 40858030
2026 In an experimental ICI-related myocarditis model, HPX acts upstream of the Nrf2/HO-1 antioxidant pathway. Quantitative proteomics and Western blot confirmed that crocins (saffron-derived compounds) ameliorate myocardial damage by targeting the Hpx/Nrf2/HO-1 axis. Molecular docking showed crocin II binds directly to Hpx, placing HPX as an upstream regulator of Nrf2 and HO-1 in cardiac oxidative stress responses. Quantitative proteomics, Western blot, molecular docking, subcutaneous xenotransplant tumor model in nude mice with ICI-related myocarditis phenotyping International journal of molecular sciences Low 41596558

Source papers

Stage 0 corpus · 41 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America 1479 12477932
2015 The BioPlex Network: A Systematic Exploration of the Human Interactome. Cell 1118 26186194
2017 Architecture of the human interactome defines protein communities and disease networks. Nature 1085 28514442
2015 A human interactome in three quantitative dimensions organized by stoichiometries and abundances. Cell 1015 26496610
2021 Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell 705 33961781
2004 The human plasma proteome: a nonredundant list developed by combination of four separate sources. Molecular & cellular proteomics : MCP 658 14718574
2011 Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in bioinformatics 656 21873635
2008 Large-scale proteomics and phosphoproteomics of urinary exosomes. Journal of the American Society of Nephrology : JASN 607 19056867
2005 Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry. Journal of proteome research 350 16335952
2002 Hemopexin: structure, function, and regulation. DNA and cell biology 342 12042069
2001 Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver. Proceedings of the National Academy of Sciences of the United States of America 300 11752456
2005 Substantial DNA damage from submicromolar intracellular hydrogen peroxide detected in Hpx- mutants of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America 287 15967999
2004 An investigation into the human serum "interactome". Electrophoresis 247 15174051
2014 Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes. Journal of proteomics 215 25281560
2015 ∆F508 CFTR interactome remodelling promotes rescue of cystic fibrosis. Nature 209 26618866
2011 Toward an understanding of the protein interaction network of the human liver. Molecular systems biology 207 21988832
2017 Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics. Journal of proteome research 185 28675934
2006 Identification of N-linked glycoproteins in human saliva by glycoprotein capture and mass spectrometry. Journal of proteome research 173 16740002
2009 Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. American journal of human genetics 164 19913121
2004 Screening for N-glycosylated proteins by liquid chromatography mass spectrometry. Proteomics 156 14760718
2013 In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine. Proteomics 138 23533145
2013 Proteomic analysis of podocyte exosome-enriched fraction from normal human urine. Journal of proteomics 126 23376485
2006 Hemopexin domains as multifunctional liganding modules in matrix metalloproteinases and other proteins. Journal of leukocyte biology 123 17185359
2004 A proteomic analysis of human bile. Molecular & cellular proteomics : MCP 123 15084671
1985 Complete amino acid sequence of human hemopexin, the heme-binding protein of serum. Proceedings of the National Academy of Sciences of the United States of America 102 3855550
2009 Hemoglobin and its scavenger protein haptoglobin associate with apoA-1-containing particles and influence the inflammatory properties and function of high density lipoprotein. The Journal of biological chemistry 97 19433579
2005 Comparative proteomic analysis of intra- and interindividual variation in human cerebrospinal fluid. Molecular & cellular proteomics : MCP 95 16199891
2009 Proteomics-derived cerebrospinal fluid markers of autopsy-confirmed Alzheimer's disease. Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals 91 19863188
2005 CD44 binding through the hemopexin-like domain is critical for its shedding by membrane-type 1 matrix metalloproteinase. Oncogene 88 15558018
2012 Proteomic analysis of microvesicles from plasma of healthy donors reveals high individual variability. Journal of proteomics 81 22516433
2014 Human-chromatin-related protein interactions identify a demethylase complex required for chromosome segregation. Cell reports 80 24981860
1998 Immunohistochemical analysis of transferrin receptor: regional and cellular distribution in the hypotransferrinemic (hpx) mouse brain. Brain research 40 9729367
2014 Identification of ApoA1, HPX and POTEE genes by omic analysis in breast cancer. Oncology reports 37 24969553
2008 The hpx genetic system for hypoxanthine assimilation as a nitrogen source in Klebsiella pneumoniae: gene organization and transcriptional regulation. Journal of bacteriology 34 18849434
1987 Simultaneous phenotyping of pig plasma alpha-protease inhibitors (PI1, PO1A, PO1B, PI2) and four other proteins (PO2, TF, CP, HPX) by a simple method of 2D horizontal electrophoresis. Animal genetics 33 3662119
2007 Two vaccine toxicity-related genes Agp and Hpx could prove useful for pertussis vaccine safety control. Vaccine 16 17280746
2013 Adaptive functional divergence of the warm temperature acclimation-related protein (WAP65) in fishes and the ortholog hemopexin (HPX) in mammals. The Journal of heredity 14 24344252
2019 Heme peroxidase HPX-2 protects Caenorhabditis elegans from pathogens. PLoS genetics 12 30695063
2024 Longitudinal assessment of urinary ALCAM, HPX, and PRDX6 in Korean patients with systemic lupus erythematosus: implications for disease activity monitoring and treatment response. Frontiers in immunology 5 38915417
2026 Crocins Ameliorate Experimental Immune Checkpoint Inhibitor-Related Myocarditis by Targeting the Hpx/Nrf2/HO-1 Pathway. International journal of molecular sciences 0 41596558
2025 Phthalates promote lenvatinib resistance in hepatocellular carcinoma through the HPX-MAPK pathway. Ecotoxicology and environmental safety 0 40858030