Affinage

FMNL1

Formin-like protein 1 · UniProt O95466

Length
1100 aa
Mass
121.9 kDa
Annotated
2026-06-09
26 papers in source corpus 13 papers cited in narrative 14 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/8 claims corpus-supported (75%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

FMNL1 is a formin-family actin nucleator and bundler that drives cortical and protrusive actin assembly across hematopoietic, epithelial, and tumor cells (PMID:20617518, PMID:30977161, PMID:32483386). Its activity is gated by autoinhibition through the diaphanous autoinhibitory domain (DAD): a C-terminally truncated splice variant (FMNL1γ) or DAD deletion relieves this control and constitutively targets the protein to the membrane and cortex in an N-myristoylation–dependent manner, where it induces polarized membrane blebbing (PMID:19815554). The three isoforms localize distinctly, and FMNL1γ bundles F-actin independently of its FH2 domain while supporting cell adhesion and migration (PMID:30977161). At the cell cortex FMNL1 localizes to macrophage podosome cores, co-precipitates with β3 integrin, and is the dominant formin sustaining podosome dynamics, adhesion, and macrophage migration (PMID:20617518, PMID:26942206); it also drives pseudopod-based coiling phagocytosis of Borrelia together with mDia1 (PMID:23460512). FMNL1 operates within Rho GTPase circuitry: it acts downstream of RhoA in a RhoA–FMNL1–mDia1–Profilin1 pathway organizing the actin cortex and meiotic spindle in oocytes (PMID:25447542, PMID:26083584), and it negatively regulates Rac1 activity to control leukemia cell migration (PMID:23801653). In migrating T cells FMNL1 concentrates at the cell rear and physically associates with the nucleus, enabling deformation of the rigid nucleus for migration through confined 3D environments (PMID:39430739). Beyond its cytoskeletal roles, FMNL1 promotes tumor aggressiveness through an indirect epigenetic mechanism, sequestering HDAC1 in the cytoplasm to de-repress transcription of MTA1 and CXCR2 (PMID:30013189, PMID:33324547). It additionally binds the scaffold AHNAK1 and modulates capacitative calcium influx (PMID:23182705).

Mechanistic history

Synthesis pass · year-by-year structured walk · 13 steps
  1. 2009 Medium

    Established how FMNL1 is targeted to the membrane and de-repressed, defining N-myristoylation and DAD-mediated autoinhibition as the switches controlling its cortical activity.

    Evidence Site-directed mutagenesis, splice-variant characterization, pharmacological inhibition, and live-cell imaging

    PMID:19815554

    Open questions at the time
    • Did not identify the physiological signal that relieves DAD autoinhibition in vivo
    • Functional consequence of blebbing for cell behavior unresolved
  2. 2010 Medium

    Placed FMNL1 at adhesive actin structures by showing it occupies podosome cores, binds β3 integrin, and is required for podosome integrity and adhesion.

    Evidence siRNA knockdown, Co-IP with β3 integrin, and live/fixed imaging in primary macrophages

    PMID:20617518

    Open questions at the time
    • Whether β3 integrin association is direct not established
    • Did not test actin nucleation activity at podosomes directly
  3. 2012 Medium

    Identified AHNAK1 as a direct FMNL1 partner and linked FMNL1 to calcium influx, extending its role beyond cytoskeletal scaffolding.

    Evidence MS interactome, Co-IP, domain-mapping pulldown, and calcium influx assays

    PMID:23182705

    Open questions at the time
    • Mechanism connecting FMNL1/AHNAK1 to calcium entry unresolved
    • Physiological context of the interaction unclear
  4. 2013 Medium

    Defined FMNL1 as a negative regulator of Rac1, an unexpected role for a formin, with consequences for leukemia cell migration.

    Evidence Co-IP, Rac1 activity pull-down, and pharmacological Rac1-inhibition rescue of migration

    PMID:23801653

    Open questions at the time
    • Molecular basis for suppression of Rac1 activity not established
    • Generality beyond leukemia cells untested
  5. 2013 Medium

    Showed FMNL1 is a required actin factor for coiling phagocytosis, acting alongside mDia1 at pathogen-contacting pseudopods.

    Evidence Immunofluorescence, ratiometric enrichment analysis, siRNA knockdown, and Borrelia internalization quantification

    PMID:23460512

    Open questions at the time
    • Division of labor between FMNL1 and mDia1 not dissected
    • Upstream receptor signaling not identified
  6. 2015 Medium

    Positioned FMNL1 within a RhoA–FMNL1–mDia1–Profilin1 pathway and at spindle poles, linking it to actin cortex polarity and meiotic spindle organization.

    Evidence Morpholino knockdown, immunofluorescence, Western blotting, and RhoA-inhibitor epistasis in mouse oocytes

    PMID:25447542 PMID:26083584

    Open questions at the time
    • Mechanism by which FMNL1 controls mDia1 protein levels unknown
    • How spindle-pole localization is established not resolved
  7. 2015 Medium

    Demonstrated FMNL1 is the dominant formin driving podosome-based macrophage migration, distinguishing its contribution from other formins.

    Evidence siRNA knockdown, SMIFH2 pan-formin inhibition, and migration/podosome quantification in primary human macrophages

    PMID:26942206

    Open questions at the time
    • Did not resolve which actin assembly step FMNL1 catalyzes at podosomes
    • Upstream activation in macrophages untested
  8. 2018 Medium

    Revealed a non-cytoskeletal, epigenetic mechanism whereby FMNL1 sequesters HDAC1 in the cytoplasm via Profilin2 to de-repress MTA1 and promote tumor aggressiveness.

    Evidence Co-IP, ChIP at the MTA1 promoter, overexpression/knockdown, and invasion assays in NPC cells

    PMID:30013189

    Open questions at the time
    • Whether cytoplasmic HDAC1 sequestration depends on actin activity not addressed
    • Direct FMNL1–HDAC1 versus indirect interaction unresolved
  9. 2019 Medium

    Distinguished isoform-specific biochemistry, showing FMNL1γ bundles actin independently of its FH2 domain while inhibiting assembly yet enhancing adhesion and migration.

    Evidence In vitro actin assembly/bundling assays with domain mutants plus isoform rescue in breast adenocarcinoma cells

    PMID:30977161

    Open questions at the time
    • Structural basis of FH2-independent bundling not defined
    • How opposing in vitro and cellular effects reconcile unclear
  10. 2020 Medium

    Extended the HDAC1-based epigenetic axis to CXCR2 and identified GATA3 loss as the driver of FMNL1 upregulation in ccRCC metastasis.

    Evidence ChIP, luciferase reporter, knockdown/overexpression, and in vivo xenograft metastasis with CXCR2-knockdown rescue

    PMID:33324547

    Open questions at the time
    • Mechanism of GATA3 repression of FMNL1 not detailed
    • Generality of the HDAC1 sequestration model across tumor types untested
  11. 2020 High

    Provided rigorous in vivo evidence that the FMNL1 ortholog nucleates a homogeneous medioapical F-actin network independent of Rho1, required for tissue-scale force transmission.

    Evidence Drosophila loss- and gain-of-function genetics with quantitative F-actin network imaging

    PMID:32483386

    Open questions at the time
    • Direct extrapolation to mammalian FMNL1 regulation not shown
    • Activating input for Rho1-independent nucleation unknown
  12. 2024 Medium

    Identified a confinement-specific function: rear-localized, nucleus-associated FMNL1 deforms the rigid T cell nucleus to enable migration through tight 3D spaces, mechanistically distinct from mDia1.

    Evidence In vivo and in vitro 2D/3D migration assays, subcellular fractionation, FMNL1/mDia1 knockout comparison, and Myosin-II inhibition

    PMID:39430739

    Open questions at the time
    • How FMNL1 physically engages the nuclear envelope not defined
    • Whether nuclear association is direct unresolved
  13. 2024 Low

    Proposed that Rab25 recycling endosomes co-deliver FMNL1 and integrin β1 to the periphery to generate filopodial protrusions during invasive migration.

    Evidence Magnetogenetic manipulation of Rab25 vesicles with F-actin protrusion quantification in 3D matrix (preprint)

    Open questions at the time
    • Preprint not peer-reviewed; FMNL1 is one of several cargoes with no FMNL1-specific functional dissection
    • Whether FMNL1 is required for the protrusions unaddressed

Open questions

Synthesis pass · forward-looking unresolved questions
  • The signals that relieve FMNL1 autoinhibition in physiological contexts and how a single nucleator switches between cortical, podosomal, nuclear-deforming, and transcription-modulating roles remain unresolved.
  • No structural model of activation in mammalian cells
  • Context-specific partner requirements not mapped
  • Relationship between actin activity and the HDAC1 epigenetic role unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 3 GO:0098772 molecular function regulator activity 2
Localization
GO:0005856 cytoskeleton 2 GO:0005886 plasma membrane 2 GO:0005815 microtubule organizing center 1 GO:0005829 cytosol 1
Pathway
R-HSA-168256 Immune System 3 R-HSA-1643685 Disease 2

Evidence

Reading pass · 14 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2009 FMNL1 membrane localization and cortical targeting is regulated by N-terminal myristoylation; a splice variant (FMNL1γ) with intron retention at the C-terminus affecting the diaphanous autoinhibitory domain (DAD) constitutively localizes to the cell membrane and cortex, mimicking a DAD-deletion mutant. Both FMNL1γ and FMNL1ΔDAD induce polarized non-apoptotic membrane blebbing dependent on N-myristoylation but independent of Src and ROCK activity. Site-directed mutagenesis, live-cell fluorescence microscopy, pharmacological inhibition (Src inhibitor, ROCK inhibitor), N-myristoylation mutant analysis, splice variant characterization The Journal of biological chemistry Medium 19815554
2010 FMNL1 (FRL1) localizes to the actin-rich cores of primary macrophage podosomes, co-precipitates with β3 integrin, and is required for podosome dynamics and cell adhesion; siRNA-mediated knockdown disrupts podosome integrity and reduces cell adhesion. siRNA knockdown, co-immunoprecipitation with β3 integrin, fixed and live-cell fluorescence microscopy, Western blotting, quantitative RT-PCR Cytoskeleton (Hoboken, N.J.) Medium 20617518
2012 FMNL1 interacts with the giant scaffolding protein AHNAK1; the N-terminal part of FMNL1 binds the C-terminus of AHNAK1. Constitutively active FMNL1γ induces relocalization of AHNAK1 to the cell membrane. FMNL1 overexpression or knockdown modulates capacitative calcium influx following ionomycin stimulation. Proteomic interactome screen (MS), co-immunoprecipitation, domain-mapping pulldown, live-cell imaging, calcium influx assay Journal of proteomics Medium 23182705
2013 FMNL1 endogenously associates with Rac1 in leukemia cells; FMNL1 silencing paradoxically increases Rac1 activity, and the reduced migration of FMNL1-depleted cells is rescued by Rac1 inhibition, placing FMNL1 upstream of Rac1 as a negative regulator of Rac1 activity in this context. Co-immunoprecipitation, siRNA knockdown, Rac1 activity assay (pull-down), pharmacological Rac1 inhibition rescue experiment, transwell migration assay Journal of leukocyte biology Medium 23801653
2013 FMNL1 and mDia1 are specifically enriched at macrophage pseudopods contacting Borrelia burgdorferi spirochetes; siRNA-mediated knockdown of FMNL1 or mDia1 decreases pseudopod formation and reduces internalization of borreliae, establishing FMNL1 as a required actin regulatory factor for coiling phagocytosis. Immunofluorescence, live-cell imaging, ratiometric analysis of formin enrichment, siRNA knockdown, quantification of Borrelia internalization Infection and immunity Medium 23460512
2014 In mouse oocytes, FMNL1 acts upstream of mDia1 in a FMNL1–mDia1–Profilin1 signaling pathway: FMNL1 knockdown reduces mDia1 expression whereas RhoA inhibition does not alter mDia1 levels, placing FMNL1 between RhoA and mDia1 for actin assembly and spindle organization during meiosis. Morpholino knockdown, immunofluorescence, Western blotting, RhoA inhibitor treatment, epistasis analysis Biochimica et biophysica acta Medium 25447542
2015 In mouse oocytes, FMNL1 localizes to spindle poles after germinal vesicle breakdown; FMNL1 knockdown causes aberrant actin expression, loss of cortical actin cap and cortical granule-free domain, failure of meiotic spindle positioning, disrupted p-MAPK localization, and aberrant GM130 (cis-Golgi) distribution. RhoA acts as an upstream regulator of FMNL1 in oocyte meiosis. Morpholino microinjection, live-cell time-lapse imaging, immunofluorescence, epistasis with RhoA inhibition Cell cycle (Georgetown, Tex.) Medium 26083584
2015 FMNL1 is required for normal podosome dynamics and macrophage migration; pharmacological inhibition of all formins reduces podosome formation, and targeted FMNL1 siRNA suppression reduces macrophage migration to a similar extent, demonstrating FMNL1 as the dominant formin driving podosome-based macrophage migration. siRNA knockdown, pharmacological formin inhibition (SMIFH2), migration assays, podosome quantification in primary human macrophages CellBio Medium 26942206
2018 FMNL1 promotes NPC cell aggressiveness by increasing MTA1 transcription through an epigenetic mechanism: FMNL1 overexpression enhances binding of HDAC1 with Profilin2 in the cytoplasm, sequestering HDAC1 away from the MTA1 promoter, thereby de-repressing MTA1 expression. Co-immunoprecipitation (HDAC1–Profilin2 interaction), chromatin immunoprecipitation (ChIP) at MTA1 promoter, ectopic overexpression and siRNA knockdown, in vitro/in vivo invasion assays Oncogene Medium 30013189
2019 FMNL1γ isoform, but not FMNL1α or FMNL1β, bundles filamentous actin independently of the FH2 domain in vitro; while FMNL1γ inhibits actin assembly in vitro, it enhances cell adhesion and rescues migration in FMNL1-depleted breast adenocarcinoma cells. The three isoforms exhibit distinct subcellular localizations. In vitro actin assembly and bundling assay, isoform overexpression and siRNA rescue, cell adhesion and migration assays, fluorescence microscopy for localization Journal of cellular biochemistry Medium 30977161
2020 FMNL1 promotes ccRCC cell migration in vitro and tumor metastasis in vivo via transcriptional induction of CXCR2; FMNL1 increases CXCR2 expression through HDAC1, and knockdown of CXCR2 markedly attenuates FMNL1-enhanced cell motility. FMNL1 upregulation in ccRCC is mediated by loss of the transcription factor GATA3. ChIP, luciferase reporter assay, siRNA knockdown, ectopic overexpression, in vivo xenograft metastasis model, rescue experiments with CXCR2 knockdown Frontiers in oncology Medium 33324547
2020 In Drosophila epithelial cells, the FMNL1 ortholog Frl/Fmnl nucleates a persistent, homogeneous F-actin subpopulation at the medioapical cortex independently of Rho1; loss of Frl reduces network density and impairs homogeneous force transmission, causing tissue-scale morphogenetic defects, while overexpression increases network density. Drosophila genetic mutants, live-cell imaging, quantitative image analysis, F-actin network characterization Nature cell biology High 32483386
2024 In T cells, FMNL1 localizes predominantly to the rear of migrating cells and a portion physically associates with the nucleus; FMNL1 promotes efficient migration specifically in confined 3D environments by facilitating deformation of the rigid T cell nucleus, a mechanism distinct from mDia1 which promotes general motility in 3D via Myosin-II activity. In vivo T cell migration analysis, in vitro 2D and 3D migration assays, subcellular fractionation and nuclear association, FMNL1/mDia1 knockout comparison, Myosin-II inhibition Frontiers in immunology Medium 39430739
2024 Rab25-positive recycling endosomes coordinate positioning of FMNL1 and integrin β1 to the cell periphery together with Rho GTPase activation at the plasma membrane to generate and maintain F-actin-rich filopodial protrusions and promote cancer cell invasive migration in 3D matrix; direct magnetic manipulation of Rab25 vesicles to the cell periphery drives F-actin protrusion formation. Magnetogenetic manipulation of Rab25 vesicle positioning, live-cell imaging, Rho GTPase activation readout, F-actin protrusion quantification in 3D matrix bioRxiv (preprint)preprint Low

Source papers

Stage 0 corpus · 26 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2003 Identification and characterization of human FMNL1, FMNL2 and FMNL3 genes in silico. International journal of oncology 128 12684686
2017 FMNL formins boost lamellipodial force generation. Nature communications 112 28327544
2010 The formin FRL1 (FMNL1) is an essential component of macrophage podosomes. Cytoskeleton (Hoboken, N.J.) 74 20617518
2009 Formin-like 1 (FMNL1) is regulated by N-terminal myristoylation and induces polarized membrane blebbing. The Journal of biological chemistry 59 19815554
2013 The formins FMNL1 and mDia1 regulate coiling phagocytosis of Borrelia burgdorferi by primary human macrophages. Infection and immunity 45 23460512
2013 FMNL1 promotes proliferation and migration of leukemia cells. Journal of leukocyte biology 44 23801653
2012 Proteomic investigation of the interactome of FMNL1 in hematopoietic cells unveils a role in calcium-dependent membrane plasticity. Journal of proteomics 41 23182705
2007 Allorestricted T cells with specificity for the FMNL1-derived peptide PP2 have potent antitumor activity against hematologic and other malignancies. Blood 40 17626842
2019 FMNL1 down-regulation suppresses bone metastasis through reducing TGF-β1 expression in non-small cell lung cancer (NSCLC). Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 34 31387165
2015 RhoA-mediated FMNL1 regulates GM130 for actin assembly and phosphorylates MAPK for spindle formation in mouse oocyte meiosis. Cell cycle (Georgetown, Tex.) 32 26083584
2020 Assembly of a persistent apical actin network by the formin Frl/Fmnl tunes epithelial cell deformability. Nature cell biology 31 32483386
2006 High expression of FMNL1 protein in T non-Hodgkin's lymphomas. Leukemia research 30 16494944
2018 FMNL1 mediates nasopharyngeal carcinoma cell aggressiveness by epigenetically upregulating MTA1. Oncogene 28 30013189
2014 Characterization of Leukocyte Formin FMNL1 Expression in Human Tissues. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society 26 24700756
2014 Formin mDia1, a downstream molecule of FMNL1, regulates Profilin1 for actin assembly and spindle organization during mouse oocyte meiosis. Biochimica et biophysica acta 25 25447542
2015 Human Macrophages Utilize the Podosome Formin FMNL1 for Adhesion and Migration. CellBio 14 26942206
2020 FMNL1 Exhibits Pro-Metastatic Activity via CXCR2 in Clear Cell Renal Cell Carcinoma. Frontiers in oncology 11 33324547
2019 miR-143 inhibits proliferation and metastasis of nasopharyngeal carcinoma cells via targeting FMNL1 based on clinical and radiologic findings. Journal of cellular biochemistry 7 31001854
2019 The carboxy-terminus of the formin FMNL1ɣ bundles actin to potentiate adenocarcinoma migration. Journal of cellular biochemistry 6 30977161
2022 Discovery of anti-Formin-like 1 protein (FMNL1) antibodies in membranous nephropathy and other glomerular diseases. Scientific reports 5 35953506
2021 FHOD1 and FMNL1 formin proteins in intestinal gastric cancer: correlation with tumor-infiltrating T lymphocytes and molecular subtypes. Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association 5 34115237
2023 Formin protein FMNL1 is a biomarker for tumor-infiltrating immune cells and associated with well immunotherapeutic response. Journal of Cancer 4 37859818
2018 A pathway-based association analysis identified FMNL1-MAP3K14 as susceptibility genes for leprosy. Experimental dermatology 3 29283461
2024 FMNL1 and mDia1 promote efficient T cell migration through complex environments via distinct mechanisms. Frontiers in immunology 1 39430739
2025 Biochemical Changes in Prostate Cancer: FMNL1 and PAK1 in Plasma and Urine. Current issues in molecular biology 0 40864802
2024 Emerging functions of FMNL1 in myeloid neoplasms: insights from bioinformatics to biological and pharmacological landscapes. Translational cancer research 0 39697714

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