Affinage

EIF1AX

Eukaryotic translation initiation factor 1A, X-chromosomal · UniProt P47813

Length
144 aa
Mass
16.5 kDa
Annotated
2026-06-09
39 papers in source corpus 14 papers cited in narrative 14 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

EIF1AX (historically eIF-4C/eIF-1A) is a eukaryotic translation initiation factor that acts catalytically to transfer the initiator Met-tRNAf (as the Met-tRNAf·eIF2·GTP ternary complex) to 40S ribosomal subunits, forming the 40S preinitiation complex without itself remaining stably associated with the assembled complex (PMID:9065455). It functions accessory to eIF-3 in dissociating native 80S ribosomes into subunits, preventing premature 40S–60S association, and resolving inactive 40S dimers into active monomers (PMID:6901506), and it is an RNA-binding protein whose basic N-terminus/acidic C-terminus dipole architecture is conserved across species and mediates ribosome and factor contacts (PMID:8106356, PMID:7890705). Beyond its core initiation role, EIF1AX drives proliferation: its overexpression promotes protein synthesis and cell growth (PMID:25281768), and it accelerates G1/S transition through p53-independent transcriptional repression of p21/CDKN1A (PMID:32926483). Cancer-associated mutations cluster regionally — N-terminal missense changes recur in uveal melanoma and co-occur with NRAS in low-grade serous ovarian carcinoma to promote proliferation (PMID:23793026, PMID:28646021), while the C-terminal A113splice variant stabilizes the 43S preinitiation complex and induces ATF4 to suppress eIF2α phosphorylation, globally elevating protein synthesis and cooperating with RAS/c-MYC to sensitize mTOR to amino acid supply (PMID:30305285). In endometrial carcinoma, XPO1-mediated cytoplasmic localization of EIF1AX promotes migration, invasion, and EMT, whereas forced nuclear import suppresses these phenotypes (PMID:36589683).

Mechanistic history

Synthesis pass · year-by-year structured walk · 14 steps
  1. 1980 Medium

    Established that EIF1AX (eIF-4C) acts at the ribosome-dissociation step of initiation rather than as a passive cofactor, defining its role in generating and maintaining the active 40S subunit pool.

    Evidence In vitro ribosome dissociation and initiation complex formation with native/washed subunits

    PMID:6901506

    Open questions at the time
    • Single lab, not independently replicated in this corpus
    • Structural basis of anti-association activity not defined
  2. 1993 Medium

    Distinguished EIF1AX function from mRNA-binding initiation factors by showing the wheat germ ortholog acts as a single polypeptide with no mRNA-specific concentration requirement, ruling out a direct role in mRNA recruitment.

    Evidence Purification and in vitro translation with multiple mRNA species (plant ortholog)

    PMID:8227048

    Open questions at the time
    • Plant ortholog model
    • Negative finding for mRNA binding role
  3. 1994 Medium

    Defined the conserved basic-N-terminus/acidic-C-terminus dipole architecture and demonstrated functional interchangeability across species, framing the structural basis for ribosome and factor interactions.

    Evidence Peptide sequencing, cDNA cloning, heterologous in vitro translation

    PMID:8106356

    Open questions at the time
    • No high-resolution structure
    • Specific rRNA/factor contacts not mapped
  4. 1995 Medium

    Characterized EIF1AX as an RNA-binding protein present at sub-stoichiometric levels relative to ribosomes and showed it is not rate-limiting for translation, refining its catalytic (not stoichiometric) role.

    Evidence Northwestern blotting, abundance quantification, overexpression in COS-1 cells

    PMID:7890705

    Open questions at the time
    • RNA targets not defined
    • Overexpression negative result in normal cells contrasts with later cancer findings
  5. 1996 Medium

    Linked EIF1AX expression to early developmental gene activation, showing its mRNA is transiently induced at zygotic gene activation in a DNA-replication- and chromatin-remodeling-dependent manner.

    Evidence Differential display, RT-PCR, pharmacological perturbation in mouse embryos

    PMID:8631492

    Open questions at the time
    • Functional consequence of induction unclear
    • Mouse embryo-specific context
  6. 1997 High

    Resolved the catalytic mechanism: EIF1AX promotes Met-tRNAf ternary complex transfer to 40S subunits but is absent from the resulting complex, showing it acts catalytically and not by stabilizing tRNA binding.

    Evidence In vitro reconstitution with purified mammalian factors and eIF5-dependent 80S formation

    PMID:9065455

    Open questions at the time
    • Kinetic mechanism of release not detailed
    • No structural snapshot of the catalytic intermediate
  7. 2013 Medium

    Identified EIF1AX as a recurrently mutated cancer gene, with in-frame N-terminal mutations clustering in disomy-3 uveal melanoma and mutual exclusivity with SF3B1, implicating the initiation-fidelity region in tumorigenesis.

    Evidence Exome and targeted resequencing of uveal melanoma cohorts

    PMID:23793026

    Open questions at the time
    • No direct functional mechanism for N-terminal mutations
    • Effect on initiation fidelity not assayed
  8. 2014 Medium

    Placed EIF1AX in a physical interaction network with 14-3-3γ and RPS7 coupling it to translation and proliferation control beyond the canonical PIC.

    Evidence Co-IP, MALDI-TOF/TOF MS, FRET, colocalization, overexpression (bovine cells)

    PMID:25281768

    Open questions at the time
    • Bovine cell model
    • Functional role of 14-3-3γ binding not dissected
  9. 2017 Medium

    Provided functional evidence that N-terminal EIF1AX mutants cooperate oncogenically with NRAS, showing co-occurrence and joint promotion of proliferation in ovarian carcinoma.

    Evidence Sequencing plus coexpression and clonogenic assays in LGSC cell lines

    PMID:28646021

    Open questions at the time
    • Molecular basis of NRAS cooperation not resolved
    • Single lab
  10. 2018 High

    Delineated the oncogenic mechanism of the C-terminal A113splice variant: PIC stabilization induces ATF4, suppresses eIF2α phosphorylation, raises global translation, and cooperates with RAS/c-MYC to drive mTOR amino-acid sensitization.

    Evidence Isogenic cell lines, mouse tumorigenesis, PIC/phosphorylation assays, inhibitor studies

    PMID:30305285

    Open questions at the time
    • Whether N-terminal mutants share this PIC-stabilizing mechanism unknown
    • Direct biophysical basis of PIC stabilization not shown
  11. 2020 Medium

    Identified a transcriptional, translation-independent oncogenic activity: EIF1AX represses p21/CDKN1A in a p53-independent manner to drive G1/S progression.

    Evidence ChIP, luciferase reporter, RNA-Seq, flow cytometry, xenograft with shRNA knockdown

    PMID:32926483

    Open questions at the time
    • Mechanism of nuclear/chromatin recruitment to CDKN1A unclear
    • Relationship to canonical cytoplasmic initiation role unresolved
  12. 2022 Medium

    Showed that subcellular localization governs EIF1AX oncogenic output, with XPO1-mediated cytoplasmic localization driving migration/invasion/EMT and nuclear import suppressing them in endometrial carcinoma.

    Evidence shRNA, SV40NLS forced import, leptomycin B, NES mutagenesis, migration/metastasis assays

    PMID:36589683

    Open questions at the time
    • Molecular effectors downstream of cytoplasmic localization not fully defined
    • Single lab
  13. 2022 Low

    Proposed a feed-forward loop in which EIF1AX regulates its own mRNA via PCBP1 and promotes c-Myc IRES-dependent translation through YBX-1 to sustain proliferation.

    Evidence RIP, Co-IP, proliferation/apoptosis assays (findings secondary to an lncRNA study)

    PMID:35080085

    Open questions at the time
    • Mechanistic findings are secondary results in an lncRNA-focused paper
    • YBX-1 interaction and IRES activity not independently confirmed
  14. 2025 Medium

    Revealed a nucleolar, senescence-inducing function whereby drug-triggered EIF1AX translocation recruits DDX21 into nucleolar aggregates that suppress rDNA transcription.

    Evidence Compound/CRISPR screens, co-IP MS, CUT&TAG, in vivo tumor assays

    PMID:41405406

    Open questions at the time
    • Endogenous trigger of nucleolar translocation unknown
    • Structural basis of DDX21 aggregate formation not defined

Open questions

Synthesis pass · forward-looking unresolved questions
  • How EIF1AX's canonical cytoplasmic translation-initiation activity mechanistically connects to its nuclear/nucleolar transcriptional and senescence functions remains unresolved.
  • No unified model linking initiation activity to chromatin/rDNA regulation
  • N-terminal vs C-terminal mutation mechanisms not reconciled
  • Structural basis of mutation-driven PIC stabilization absent

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0045182 translation regulator activity 2 GO:0003723 RNA binding 1 GO:0140110 transcription regulator activity 1
Localization
GO:0005634 nucleus 2 GO:0005840 ribosome 2 GO:0005730 nucleolus 1 GO:0005829 cytosol 1
Pathway
R-HSA-1643685 Disease 2 R-HSA-392499 Metabolism of proteins 2 R-HSA-1640170 Cell Cycle 1
Complex memberships
43S preinitiation complex

Evidence

Reading pass · 14 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1997 EIF1A (eIF-4C) is essential for transfer of the initiator Met-tRNAf (as Met-tRNAf·eIF2·GTP ternary complex) to 40S ribosomal subunits in the absence of mRNA to form the 40S preinitiation complex; it acts catalytically in this reaction and is absent from the resulting complex, indicating it does not stabilize Met-tRNAf binding. EIF1A plays no role in the subunit joining reaction or in generating ribosomal subunits from 80S ribosomes. In vitro translation initiation assay with purified mammalian components; functional reconstitution with eIF5-dependent 80S complex formation The Journal of biological chemistry High 9065455
1980 eIF-4C (EIF1AX) stimulates initiation complex formation by acting accessory to eIF-3 in dissociating native 80S ribosomes into subunits, preventing premature 40S–60S association, and dissociating inactive 40S dimers into active monomers. In vitro ribosome dissociation and initiation complex formation assay with native and washed ribosomal subunits Biochimica et biophysica acta Medium 6901506
1994 EIF1AX (eIF-4C) protein has a distinctive dipole structure: basic N-terminus and acidic C-terminus, conserved between mammalian and wheat germ proteins (68% identity), suggesting the polarity enables interaction with ribosomes (via rRNA) and other translation initiation factors. Wheat germ and rabbit eIF-4C are functionally interchangeable in heterologous in vitro assays. Chemical peptide sequencing, cDNA cloning, PCR, heterologous in vitro translation assays The Journal of biological chemistry Medium 8106356
1995 EIF1AX (eIF-1A) is an RNA-binding protein, as demonstrated by Northwestern blotting with mRNA fragments. Its abundance in HeLa cells is 0.2 molecules per ribosome, and overexpression of eIF-1A fails to stimulate translation rates in transiently transfected COS-1 cells, indicating it is not limiting for protein synthesis. Northwestern blotting; Western immunoblotting; polysome profile analysis; transient transfection with overexpression; E. coli overexpression and purification The Journal of biological chemistry Medium 7890705
1993 Wheat germ eIF-4C (EIF1AX ortholog) functions as a single polypeptide and is not involved in mRNA binding to 40S ribosomal subunits, as concentrations required for translation are similar across different mRNA species whereas eIF-4A and eIF-4F show mRNA-specific differences. Purification from wheat germ, gel filtration, in vitro translation assay with satellite tobacco necrosis virus RNA, alfalfa mosaic virus RNA 4, and barley alpha-amylase mRNA The Journal of biological chemistry Medium 8227048
2018 The C-terminal EIF1AX-A113splice mutation (most prevalent in advanced thyroid cancer) stabilizes the 43S preinitiation complex (PIC) and induces ATF4, which suppresses EIF2α phosphorylation, enabling a general increase in protein synthesis. Co-occurring RAS mutations stabilize c-MYC (augmented by EIF1AX-A113splice). ATF4 and c-MYC together induce amino acid transporters and sensitize mTOR to amino acid supply, cooperating with RAS to drive tumorigenesis. Isogenic cell lines expressing mutant EIF1AX, mouse tumorigenesis models, ribosome/PIC assembly assays, phosphorylation assays (EIF2α), gene expression analysis, mTOR sensitivity assays, pharmacological inhibition (MEK, BRD4, mTOR inhibitors) Cancer discovery High 30305285
2017 Missense EIF1AX mutations clustered at the N-terminus (region associated with translational initiation fidelity) co-occur significantly with NRAS mutations in low-grade serous ovarian carcinoma; coexpression of mutant NRAS and EIF1AX proteins promoted proliferation and clonogenic survival in LGSC cells. Exome and whole genome sequencing; coexpression of mutant proteins in LGSC cell lines; proliferation and clonogenic survival assays Cancer research Medium 28646021
2014 EIF1AX interacts with 14-3-3γ and RPS7 in bovine mammary epithelial cells, forming a molecular network that regulates protein translation and cell proliferation; these interactions were confirmed by co-immunoprecipitation, MALDI-TOF/TOF peptide mass fingerprinting, colocalization, and FRET analysis. Overexpression of EIF1AX promotes protein translation and cell proliferation. Co-immunoprecipitation, MALDI-TOF/TOF mass spectrometry, FRET, colocalization, overexpression and inhibition experiments Archives of biochemistry and biophysics Medium 25281768
2020 EIF1AX promotes breast cancer cell proliferation by driving G1/S cell cycle transition through transcriptional repression of p21 (CDKN1A) in a p53-independent manner, as demonstrated by ChIP and luciferase reporter assays. Colony formation and xenograft assays, RNA-Seq, flow cytometry (cell cycle), ChIP assay, luciferase reporter assay, shRNA knockdown Cell proliferation Medium 32926483
2022 Cytoplasmic localization of EIF1AX (mediated by exportin 1/XPO1) promotes tumor cell migration, invasion, and epithelial-mesenchymal transition in endometrial carcinoma; nuclear import of EIF1AX (via SV40NLS) suppresses these phenotypes. XPO1-dependent nuclear export of EIF1AX was confirmed by leptomycin B treatment and mutation of the EIF1AX nuclear export sequence. shRNA knockdown, SV40NLS-forced nuclear import, leptomycin B treatment, nuclear export sequence mutagenesis, migration/invasion assays, in vivo lung metastasis model, subcellular fractionation/immunofluorescence Oxidative medicine and cellular longevity Medium 36589683
2022 EIF1AX interacts with EIF1AX mRNA and PCBP1 to promote EIF1AX mRNA degradation; additionally, EIF1AX promotes c-Myc translation through the internal ribosome entry site (IRES) pathway via interaction with YBX-1, forming a feed-forward loop that sustains EC cell proliferation. RNA immunoprecipitation, co-immunoprecipitation, in vitro and in vivo proliferation/apoptosis assays, RNA sequencing; the paper primarily describes the lncRNA EIF1AX-AS1 but mechanistically links it to EIF1AX protein function Cancer science Low 35080085
2025 EIF1AX undergoes nucleolar translocation upon treatment with 2,5-MeC in endometrial cancer cells; this translocation promotes cellular senescence by recruiting DDX21 to form nucleolar aggregates that suppress rDNA transcription, as shown by co-immunoprecipitation mass spectrometry and CUT&TAG sequencing. Compound library screen, CRISPR library screen, co-immunoprecipitation mass spectrometry, CUT&TAG sequencing, RNA sequencing, antibody array, in vivo tumor growth assays Advanced science Medium 41405406
1996 eIF-4C (EIF1AX) mRNA is transiently increased at the 2-cell stage of mouse preimplantation embryo development (zygotic gene activation); this increase requires the first round of DNA replication (blocked by aphidicolin) and is reversed by a mechanism requiring chromatin remodeling via histone deacetylation (blocked by trapoxin), but does not require cytokinesis or mitosis. mRNA differential display, RT-PCR, two-dimensional gel electrophoresis (protein synthesis rate), aphidicolin/cytochalasin D/nocodazole/trapoxin pharmacological treatments in mouse embryos Developmental biology Medium 8631492
2013 Recurrent somatic EIF1AX mutations in uveal melanoma all cause in-frame changes specifically affecting the N-terminus of the protein, identified by exome sequencing and confirmed by targeted resequencing; these mutations occur predominantly in tumors with disomy 3 and are mutually exclusive with SF3B1 mutations. Exome sequencing, targeted resequencing of 31 disomy-3 and 35 monosomy-3 uveal melanomas Nature genetics Medium 23793026

Source papers

Stage 0 corpus · 39 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 Exome sequencing identifies recurrent somatic mutations in EIF1AX and SF3B1 in uveal melanoma with disomy 3. Nature genetics 420 23793026
2014 Chromosome 3 status combined with BAP1 and EIF1AX mutation profiles are associated with metastasis in uveal melanoma. Investigative ophthalmology & visual science 137 24970262
1996 Transient expression of translation initiation factor eIF-4C during the 2-cell stage of the preimplantation mouse embryo: identification by mRNA differential display and the role of DNA replication in zygotic gene activation. Developmental biology 135 8631492
2014 Mutation frequencies of GNAQ, GNA11, BAP1, SF3B1, EIF1AX and TERT in uveal melanoma: detection of an activating mutation in the TERT gene promoter in a single case of uveal melanoma. British journal of cancer 87 24423917
2018 EIF1AX and RAS Mutations Cooperate to Drive Thyroid Tumorigenesis through ATF4 and c-MYC. Cancer discovery 82 30305285
2016 Prevalence and phenotypic correlations of EIF1AX mutations in thyroid nodules. Endocrine-related cancer 79 26911375
1997 Function of eukaryotic translation initiation factor 1A (eIF1A) (formerly called eIF-4C) in initiation of protein synthesis. The Journal of biological chemistry 79 9065455
2017 EIF1AX and NRAS Mutations Co-occur and Cooperate in Low-Grade Serous Ovarian Carcinomas. Cancer research 68 28646021
2016 SF3B1 and EIF1AX mutations occur in primary leptomeningeal melanocytic neoplasms; yet another similarity to uveal melanomas. Acta neuropathologica communications 37 26769193
1995 Protein synthesis initiation factor eIF-1A is a moderately abundant RNA-binding protein. The Journal of biological chemistry 36 7890705
2017 Frequent GNAQ, GNA11, and EIF1AX Mutations in Iris Melanoma. Investigative ophthalmology & visual science 35 28700778
1980 The role of eIF-4C in protein synthesis initiation complex formation. Biochimica et biophysica acta 34 6901506
1994 Determination of the amino acid sequence of rabbit, human, and wheat germ protein synthesis factor eIF-4C by cloning and chemical sequencing. The Journal of biological chemistry 29 8106356
2018 The role of EIF1AX in thyroid cancer tumourigenesis and progression. Journal of endocrinological investigation 23 29968046
2014 Molecular network including eIF1AX, RPS7, and 14-3-3γ regulates protein translation and cell proliferation in bovine mammary epithelial cells. Archives of biochemistry and biophysics 23 25281768
2018 TERT, HRAS, and EIF1AX Mutations in a Patient with Follicular Adenoma. Thyroid : official journal of the American Thyroid Association 21 29669480
1993 Characterization of wheat germ protein synthesis initiation factor eIF-4C and comparison of eIF-4C from wheat germ and rabbit reticulocytes. The Journal of biological chemistry 20 8227048
2018 Detection of mutations in SF3B1, EIF1AX and GNAQ in primary orbital melanoma by candidate gene analysis. BMC cancer 17 30558566
2019 Mutations of GNAQ, GNA11, SF3B1, EIF1AX, PLCB4 and CYSLTR in Uveal Melanoma in Chinese Patients. Ophthalmic research 16 31614358
2021 Characterization and Clinical Significance of EIF1AX Mutations and Co-Mutations in Cytologically Indeterminate Thyroid Nodules: A 5-Year Retrospective Analysis. Acta medica academica 15 34075760
2022 Long noncoding RNA EIF1AX-AS1 promotes endometrial cancer cell apoptosis by affecting EIF1AX mRNA stabilization. Cancer science 14 35080085
2022 EIF1AX mutation in thyroid tumors: a retrospective analysis of cytology, histopathology and co-mutation profiles. Journal of otolaryngology - head & neck surgery = Le Journal d'oto-rhino-laryngologie et de chirurgie cervico-faciale 14 36371345
2020 Transcriptional repression of p21 by EIF1AX promotes the proliferation of breast cancer cells. Cell proliferation 14 32926483
2018 Absence of EIF1AX, PPM1D, and CHEK2 mutations reported in Thyroid Cancer Genome Atlas (TCGA) in a large series of thyroid cancer. Endocrine 14 30269267
2022 Clinicopathological features and outcomes of thyroid nodules with EIF1AX mutations. Endocrine-related cancer 11 35609001
2022 XPO1-Mediated EIF1AX Cytoplasmic Relocation Promotes Tumor Migration and Invasion in Endometrial Carcinoma. Oxidative medicine and cellular longevity 11 36589683
2004 Real-time reverse transcription-polymerase chain reaction analysis of translation initiation factor 1A (eIF-1A) in human and mouse preimplantation embryos. Reproductive biomedicine online 11 15038901
2021 The Sex Differences in Uveal Melanoma: Potential Roles of EIF1AX, Immune Response and Redox Regulation. Current oncology (Toronto, Ont.) 10 34436011
2018 EIF1AX Mutation in a Patient with Hürthle Cell Carcinoma. Endocrine pathology 9 28965201
1998 Molecular cloning and expression of the mouse translation initiation factor eIF-1A. Nucleic acids research 8 9753744
2024 Expression of GNAQ, BAP1, SF3B1, and EIF1AX Proteins in the Aqueous Humor of Eyes Affected by Uveal Melanoma. Investigative ophthalmology & visual science 5 38175637
2022 An unusual familial Xp22.12 microduplication including EIF1AX: A novel candidate dosage-sensitive gene for premature ovarian insufficiency. European journal of medical genetics 5 36113757
2021 Lnc5926 is essential for early embryonic development in goats through regulation of ZSCAN4 and EIF1AX. Theriogenology 5 34954662
2022 A thyroid EIF1AX story: how clinical, cytologic, and molecular surveillance led to appropriate management. Journal of the American Society of Cytopathology 3 36504010
2020 EIF1AX c.338-2A>T splice site mutation in a patient with trabecular adenoma and cytological indeterminate lesion. Archives of endocrinology and metabolism 3 32236306
2025 Co-occurrence of EIF1AX, SF3B1, or BAP1 variants in uveal melanomas: A case series and review. American journal of ophthalmology case reports 2 40271082
2024 EIF1AX mutation in thyroid nodules: a histopathologic analysis of 56 cases in the context of institutional practices. Virchows Archiv : an international journal of pathology 1 39225726
2026 Genomic profiling of a DICER1-wildtype thyroblastoma reveals AGK-BRAF fusion, EIF1AX duplication, and TERT promoter mutations: integrated genomic and pathway analysis. Frontiers in endocrinology 0 42100208
2025 EIF1AX Nucleolar Condensates Enhance Susceptibilities for the Management of Endometrial Cancer. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 0 41405406

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