Affinage

DENND1C

DENN domain-containing protein 1C · UniProt Q8IV53

Length
801 aa
Mass
87.1 kDa
Annotated
2026-06-09
10 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

DENND1C (connecdenn 3) is a DENN-domain guanine nucleotide exchange factor that couples site-specific Rab GTPase activation to actin-based membrane remodeling and cell motility (PMID:20937701, PMID:22072793). It activates Rab35 through its N-terminal DENN domain, and unlike its paralogs DENND1A and DENND1B it possesses a unique C-terminal actin-binding motif; both the DENN domain and this motif are required to drive formation of protrusive membrane extensions, where DENND1C and active Rab35 colocalize with the actin-bundling protein fascin (PMID:22072793). In a parallel signaling context, DENND1C is phosphorylated by the kinase Mst1 to activate Rab13, which then promotes myosin Va-dependent delivery of the integrin LFA-1 to the leading edge of chemokine-stimulated migrating lymphocytes (PMID:25074980). DENND1C is also recruited with Rab35 to the IL-17R/Act1 complex upon IL-17A stimulation, driving Rab35-dependent PKCα activation and fascin Ser39 phosphorylation to enable stress fiber formation and airway smooth muscle contraction (PMID:30683702). Its GEF activity is context-restricted: DENND1C knockout does not phenocopy Rab35 loss in polarized epithelial podocalyxin trafficking, indicating it is not the primary Rab35 GEF in that pathway (PMID:31992598).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2010 High

    Establishing DENND1C as a Rab GEF answered which Rab it acts on, placing it within the DENN-domain family responsible for site-specific Rab activation in membrane trafficking.

    Evidence Family-wide GEF activity assays and localization across 17 human DENN domain proteins

    PMID:20937701

    Open questions at the time
    • Does not define a cellular pathway or membrane compartment specific to DENND1C
    • Does not distinguish DENND1C function from DENND1A/DENND1B
  2. 2011 High

    Identifying a unique C-terminal actin-binding motif explained how DENND1C distinctively couples Rab35 activation to cytoskeletal remodeling and protrusive membrane formation, separating it functionally from its paralogs.

    Evidence Direct actin-binding assays, domain deletion/mutagenesis, colocalization imaging, and cell-shape phenotype in a focused DENND1C study

    PMID:22072793

    Open questions at the time
    • Physiological context of protrusive extension formation not defined
    • Mechanism linking fascin to the Rab35-DENND1C complex not resolved
  3. 2014 High

    Discovery of Mst1-dependent phosphorylation activating Rab13 revealed a second GTPase target and a kinase-regulated role for DENND1C in integrin delivery during lymphocyte migration.

    Evidence Phosphorylation and Rab13 activation assays, reciprocal co-IP, migration/adhesion assays, and Rab13-deficient mouse model

    PMID:25074980

    Open questions at the time
    • Phosphorylation site(s) on DENND1C not mapped
    • How phosphorylation switches GEF specificity toward Rab13 unresolved
  4. 2019 Medium

    Placing DENND1C/Rab35 downstream of the IL-17R/Act1 complex connected its GEF activity to receptor signaling driving PKCα-fascin-dependent smooth muscle contraction.

    Evidence Co-IP of recruitment to IL-17R/Act1, Rab35 knockdown with PKCα and fascin phosphorylation readouts, and contraction assays in airway smooth muscle cells

    PMID:30683702

    Open questions at the time
    • Single-lab finding without independent replication
    • Direct versus indirect recruitment of DENND1C to the complex not distinguished
  5. 2020 Medium

    Testing DENND1C against other Rab35 GEFs established that its activity is context-restricted, ruling it out as the primary GEF for epithelial podocalyxin trafficking.

    Evidence DENND1C knockout in MDCK II cells with podocalyxin localization imaging in 2D and 3D

    PMID:31992598

    Open questions at the time
    • Possible redundancy with other GEFs not excluded
    • Does not identify which contexts depend specifically on DENND1C

Open questions

Synthesis pass · forward-looking unresolved questions
  • How DENND1C selects between its Rab35 and Rab13 targets, and what determines its tissue- and context-specific deployment, remains unresolved.
  • Structural basis of dual Rab35/Rab13 specificity unknown
  • Phosphorylation sites and their effect on substrate choice unmapped

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 3 GO:0008092 cytoskeletal protein binding 1
Localization
GO:0005856 cytoskeleton 1
Pathway
R-HSA-168256 Immune System 2 R-HSA-5653656 Vesicle-mediated transport 2

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2010 DENND1C (along with DENND1A and DENND1B) was identified as a Rab GEF (guanine nucleotide exchange factor) that specifically activates Rab35, placing it in the family of DENN-domain GEFs responsible for site-specific Rab activation in membrane trafficking. Systematic family-wide characterization of 17 human DENN domain proteins including GEF activity assays and localization studies The Journal of cell biology High 20937701
2011 DENND1C (connecdenn 3) directly binds actin via a unique C-terminal motif not found in DENND1A or DENND1B, coupling Rab35 activation to the actin cytoskeleton and causing formation of protrusive membrane extensions. Both the actin-binding C-terminal motif and the N-terminal DENN domain (GEF activity) are required for this effect. DENND1C and active Rab35 colocalize with the actin-bundling protein fascin on actin filaments, identifying DENND1C as the relevant GEF for Rab35-fascin-mediated actin regulation. Direct actin-binding assays, domain deletion/mutagenesis, co-localization imaging, cell shape phenotype readout (protrusive membrane extensions) Molecular biology of the cell High 22072793
2014 In T lymphocytes stimulated with chemokine, the kinase Mst1 phosphorylates DENND1C, which activates Rab13. Active Rab13 then associates with Mst1 to facilitate delivery of the integrin LFA-1 to the leading edge of migrating lymphocytes via myosin Va along actin filaments, promoting lymphocyte adhesion and trafficking. Phosphorylation assay (Mst1-dependent phosphorylation of DENND1C), Rab13 activation assay, co-immunoprecipitation, cell migration/adhesion assay on ICAM-1, Rab13-deficient mouse model Science signaling High 25074980
2019 Upon IL-17A stimulation of airway smooth muscle cells, DENND1C (as GEF) is recruited together with Rab35 to the IL-17R/Act1 receptor complex, leading to Rab35 activation, which is required for PKCα activation and fascin phosphorylation at Ser39, enabling stress fiber formation and enhanced smooth muscle contraction. Co-immunoprecipitation of DENND1C/Rab35 with IL-17R/Act1 complex, Rab35 knockdown with PKCα activation readout, fascin phosphorylation assay, airway smooth muscle contraction assay Journal of immunology Medium 30683702
2020 Among the four known Rab35 GEFs (DENND1A, DENND1B, DENND1C, folliculin), DENND1C knockout did not phenocopy Rab35 knockout in podocalyxin (PODXL) trafficking in either 2D or 3D MDCK epithelial cell cultures, indicating that DENND1C is not the primary GEF for Rab35 in polarized epithelial PODXL trafficking (negative finding for DENND1C in this context). DENND1C knockout in MDCK II cells, fluorescence imaging of podocalyxin localization in 2D and 3D cultures The Journal of biological chemistry Medium 31992598

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2010 Family-wide characterization of the DENN domain Rab GDP-GTP exchange factors. The Journal of cell biology 280 20937701
2015 An analysis of DNA methylation in human adipose tissue reveals differential modification of obesity genes before and after gastric bypass and weight loss. Genome biology 200 25651499
2014 Rab13 acts downstream of the kinase Mst1 to deliver the integrin LFA-1 to the cell surface for lymphocyte trafficking. Science signaling 61 25074980
2011 Connecdenn 3/DENND1C binds actin linking Rab35 activation to the actin cytoskeleton. Molecular biology of the cell 47 22072793
2023 PCSK9 facilitates melanoma pathogenesis via a network regulating tumor immunity. Journal of experimental & clinical cancer research : CR 34 36588164
2016 Biological significance of genome-wide DNA methylation profiles in keloids. The Laryngoscope 24 27312686
2019 IL-17A Recruits Rab35 to IL-17R to Mediate PKCα-Dependent Stress Fiber Formation and Airway Smooth Muscle Contractility. Journal of immunology (Baltimore, Md. : 1950) 15 30683702
2020 Rab35-GEFs, DENND1A and folliculin differentially regulate podocalyxin trafficking in two- and three-dimensional epithelial cell cultures. The Journal of biological chemistry 9 31992598
2025 Identification of shared pathophysiological molecules of major psychiatric disorders: A comprehensive analysis of serum immune complex antigens before and after electroconvulsive therapy. Journal of neuroimmunology 1 40306147
2025 Identification of Progression-Associated Biomarkers in Lung Cancer Based on the Integrated Analysis of RNA Sequencing Data From Platelets and Tumor Tissues. International journal of genomics 0 41031217

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