Affinage

CEP170

Centrosomal protein of 170 kDa · UniProt Q5SW79

Round 2 corrected
Length
1584 aa
Mass
175.3 kDa
Annotated
2026-04-28
45 papers in source corpus 12 papers cited in narrative 12 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CEP170 is a centrosomal scaffold protein that organizes microtubule networks from the mother centriole subdistal appendages, the mitotic spindle, and the ciliary basal body. It directly binds microtubules and recruits kinesin-13 family depolymerases—Kif2b to the mitotic spindle and KIF2A to the basal body via WDR62—thereby controlling spindle integrity, cilium disassembly, and cell cycle progression (PMID:23087211, PMID:31197141). CEP170 also stabilizes the dynein-2 holoenzyme to support intraflagellar transport and hedgehog signaling in primary cilia, and promotes spindle orientation by anchoring the dynein/dynactin complex at the cell cortex (PMID:38533689, PMID:39708485). In the developing cortex, CEP170 is required for neural progenitor proliferation, neuronal migration, and proper laminar organization, with its centrosomal targeting and microtubule association dependent on C-terminal interactions with CCDC120 (PMID:41888776).

Mechanistic history

Synthesis pass · year-by-year structured walk · 10 steps
  1. 2003 Medium

    Identification of CEP170 as a bona fide centrosomal component established the starting point for functional characterization of this previously uncharacterized protein.

    Evidence Mass spectrometry-based protein correlation profiling of purified human centrosome fractions with in vivo localization validation

    PMID:14654843

    Open questions at the time
    • No functional information; identity as centrosomal protein rested on co-fractionation and localization only
  2. 2004 High

    Characterization of CEP170 as an FHA-domain protein and Plk1 substrate localized to subdistal appendages revealed it as a cell-cycle-regulated centrosomal scaffold whose perturbation disrupts microtubule organization.

    Evidence Yeast two-hybrid, co-immunoprecipitation, in vitro kinase assay, siRNA knockdown, immunoelectron microscopy

    PMID:15616186

    Open questions at the time
    • Mechanism by which CEP170 organizes microtubules was unknown
    • Functional significance of Plk1 phosphorylation on CEP170 activity not resolved
  3. 2012 High

    Discovery that CEP170 directly binds microtubules and selectively recruits the kinesin-13 depolymerase Kif2b to the spindle established its mechanistic role as a specificity factor for microtubule-depolymerizing motors, while super-resolution imaging resolved its ring-like architecture at subdistal appendages.

    Evidence In vitro microtubule-binding assay, reciprocal co-IP, siRNA knockdown, 3D-SIM super-resolution microscopy

    PMID:23087211 PMID:23213374

    Open questions at the time
    • Whether CEP170 recruits other kinesin family members in different cellular contexts was untested
    • Structural basis of the CEP170–Kif2b interaction was unresolved
  4. 2015 Medium

    Demonstration that the Chlamydia effector IPAM redirects CEP170 to the bacterial inclusion to reorganize host microtubules showed that CEP170 can nucleate microtubule-organizing activity from non-centrosomal platforms.

    Evidence siRNA knockdown, ectopic bacterial effector expression, infectivity assays, co-localization studies

    PMID:26220855

    Open questions at the time
    • Molecular details of IPAM–CEP170 binding interface unknown
    • Whether other pathogens exploit CEP170 was not examined
  5. 2018 Medium

    Placement of CEP170 downstream of Ccdc61 and identification of its interaction with TBK1 as required for microtubule stability defined an upstream regulatory hierarchy controlling CEP170 centrosomal localization during mitosis.

    Evidence siRNA knockdown, co-immunoprecipitation, immunofluorescence, microtubule tip-tracking

    PMID:30354798

    Open questions at the time
    • Direct phosphorylation of CEP170 by TBK1 not demonstrated
    • Independence of Ccdc61 and Plk1 regulatory inputs not established
  6. 2019 High

    The WDR62–CEP170–KIF2A axis was identified as a cilium disassembly pathway at the basal body, linking CEP170 to primary cilia dynamics, neural progenitor cell cycle control, and microcephaly pathogenesis.

    Evidence Reciprocal co-IP, Wdr62 mouse knockout and cerebral organoid models, cilium length measurements, rescue with KIF2A overexpression; confirmed in spermatocytes by conditional knockout

    PMID:31197141 PMID:31533924

    Open questions at the time
    • Whether CEP170 functions in cilia independently of WDR62 was unclear
    • Structural basis of CEP170 basal body targeting not defined
  7. 2022 Medium

    Identification of CEP170 mRNA as a target of NAT10-mediated ac4C acetylation that enhances its translation connected epitranscriptomic regulation to centrosomal protein dosage and chromosomal instability in multiple myeloma.

    Evidence acRIP-seq, Ribo-seq, RIP-PCR, siRNA epistasis, proliferation assays

    PMID:35967285

    Open questions at the time
    • Whether ac4C modification of CEP170 mRNA occurs in non-malignant cells was not tested
    • Relative contributions of transcriptional vs. epitranscriptomic control of CEP170 levels unknown
  8. 2024 Medium

    CEP170 was shown to interact with the dynein-2 complex and support its holoenzyme stability, directly linking CEP170 to intraflagellar transport and hedgehog signaling and extending its ciliary role beyond disassembly to active ciliary trafficking.

    Evidence Co-IP/mass spectrometry, siRNA knockdown, IFT assays, hedgehog signaling reporter assays

    PMID:38533689

    Open questions at the time
    • Whether CEP170 acts as a dynein-2 assembly factor or a stability chaperone is unresolved
    • In vivo ciliopathy phenotypes from CEP170 loss not yet reported
  9. 2024 Medium

    METTL3-mediated m6A modification was shown to upregulate CEP170, whose loss causes spindle misorientation and cortical dynein/dynactin mislocalization, revealing CEP170 as a determinant of oriented cell division.

    Evidence m6A-seq, RNA-seq, cell cycle synchronization, co-immunoprecipitation, siRNA knockdown in esophageal cancer cells

    PMID:39708485

    Open questions at the time
    • Mechanism by which CEP170 anchors dynein/dynactin at the cortex is not defined
    • ASPM as a transcriptional target of CEP170 lacks a clear mechanistic pathway
  10. 2026 Medium

    In vivo cortical neurodevelopmental studies established that CEP170 is essential for neural progenitor proliferation, neuronal migration, and laminar organization, with its C-terminal domain mediating centrosomal targeting through CCDC120 interaction.

    Evidence In utero electroporation shRNA knockdown, CRISPR/Cas9 knockout, co-IP, microtubule regrowth assay, scRNA-seq, spatial transcriptomics in mouse cortex

    PMID:41888776

    Open questions at the time
    • Whether human CEP170 variants cause neurodevelopmental disease awaits patient-based studies
    • Relative contributions of ciliary vs. centrosomal CEP170 functions to cortical development are not dissected

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include the structural basis of CEP170's multivalent scaffolding at subdistal appendages, whether CEP170 loss causes ciliopathy phenotypes in vivo, and how its Plk1-dependent mitotic phosphorylation regulates its diverse interactor recruitment.
  • No high-resolution structure of CEP170 or its complexes
  • Functional significance of individual Plk1 phosphorylation sites remains unmapped
  • No human Mendelian disease directly attributed to CEP170 mutations

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 4 GO:0060090 molecular adaptor activity 3
Localization
GO:0005815 microtubule organizing center 4 GO:0005856 cytoskeleton 4 GO:0005929 cilium 2
Pathway
R-HSA-1640170 Cell Cycle 3 R-HSA-1852241 Organelle biogenesis and maintenance 3 R-HSA-162582 Signal Transduction 1
Complex memberships
dynein-2 holoenzyme

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 CEP170 (Cep170) was identified as a forkhead-associated (FHA) domain protein that interacts with Polo-like kinase 1 (Plk1) via yeast two-hybrid screening. It is phosphorylated during mitosis and can serve as a Plk1 substrate in vitro. CEP170 localizes to subdistal appendages of the mature mother centriole during interphase and to spindle microtubules during mitosis. siRNA-mediated depletion or overexpression causes defects in microtubule organization and cell morphology. Its centriole-specific staining can distinguish bona fide centriole overduplication from amplification arising from aborted cell division. Yeast two-hybrid, co-immunoprecipitation, in vitro kinase assay, siRNA knockdown, overexpression, immunoelectron microscopy, immunofluorescence Molecular biology of the cell High 15616186
2012 CEP170 directly binds microtubules in vitro and specifically associates with the kinesin-13 depolymerase Kif2b (but not Kif2a or Kif2c/MCAK). This interaction provides Kif2b with a second microtubule-binding site that targets it to the mitotic spindle, establishing CEP170 as an extrinsic factor conferring specificity and spindle localization to Kif2b. Co-immunoprecipitation, in vitro microtubule-binding assay, siRNA knockdown, immunofluorescence Molecular biology of the cell High 23087211
2015 The Chlamydia trachomatis inclusion-localized effector IPAM recruits CEP170 to the inclusion surface and stimulates its activity to reorganize host microtubule networks. CEP170 is essential for chlamydial control of host microtubule assembly, inclusion morphogenesis, and bacterial infectivity, demonstrating that CEP170 mediates microtubule organization from non-centrosomal sites when recruited by a bacterial effector. Immunofluorescence, siRNA knockdown, ectopic expression of bacterial effector, infectivity assays, co-localization studies Journal of cell science Medium 26220855
2018 The centrosomal protein Ccdc61 controls the centrosomal localization of CEP170 and is required for spindle assembly and symmetry. Loss of Ccdc61 disrupts the interaction between CEP170 and TANK-binding kinase 1 (TBK1), an interaction required for microtubule stability, placing CEP170 downstream of Ccdc61 in a pathway governing mitotic microtubule organization. siRNA knockdown, immunofluorescence, co-immunoprecipitation, microtubule tip-tracking Molecular biology of the cell Medium 30354798
2019 WDR62 interacts with CEP170 and promotes its localization to the basal body of primary cilia, where CEP170 in turn recruits the microtubule-depolymerizing kinesin KIF2A to disassemble cilia. WDR62 depletion reduces KIF2A basal body localization and causes retarded cilium disassembly, prolonged cilium length, and delayed cell cycle progression in neural progenitors, contributing to microcephaly. Enhanced KIF2A expression partially rescues these deficits. Co-immunoprecipitation, mouse knockout, cerebral organoid modeling, immunofluorescence, cilium length measurement, cell cycle analysis, rescue experiments Nature communications High 31197141
2019 WDR62 interacts with CEP170 in spermatocytes, and deletion of Wdr62 causes downregulation of CEP170 protein, leading to aberrant spindle assembly and metaphase I arrest due to asymmetric centrosome distribution. Co-immunoprecipitation, mouse conditional knockout, immunofluorescence, western blotting Development (Cambridge, England) Medium 31533924
2022 NAT10 acetylates CEP170 mRNA at N6-adenosine (ac4C modification) to enhance its translation efficiency in multiple myeloma cells. CEP170 overexpression promotes cell proliferation and chromosomal instability, and knockdown of CEP170 attenuates the pro-proliferative effect of elevated NAT10, placing CEP170 as a downstream effector of NAT10-mediated mRNA acetylation. acRIP-seq, Ribo-seq, RIP-PCR, siRNA knockdown, overexpression, in vitro and in vivo proliferation assays Acta pharmaceutica Sinica. B Medium 35967285
2024 CEP170 interacts with the dynein-2 complex in mammalian cells. Loss of CEP170 perturbs intraflagellar transport (IFT), disrupts hedgehog signaling, and alters the stability of the dynein-2 holoenzyme complex, identifying CEP170 as a factor supporting cilia function through dynein-2 assembly. Co-immunoprecipitation/mass spectrometry, siRNA knockdown, IFT assays, hedgehog signaling reporter assays, western blotting Journal of cell science Medium 38533689
2024 METTL3 deposits m6A modifications on CEP170 mRNA in esophageal cancer, upregulating CEP170 expression. CEP170 is required for proper mitotic progression and spindle orientation; its knockdown leads to spindle misorientation, impaired astral microtubule stability, and mislocalization of the dynein/dynactin motor complex at the cell cortex. ASPM was identified as a downstream transcriptional target of CEP170 in regulating mitosis. m6A-seq, RNA-seq, cell cycle synchronization, immunofluorescence, co-immunoprecipitation, methylated RNA immunoprecipitation, siRNA knockdown International immunopharmacology Medium 39708485
2026 CEP170 is required for neural progenitor proliferation, neuronal migration, and cortical laminar organization in the developing mouse cortex. C-terminal truncations of CEP170 disrupt its centrosomal localization and microtubule association via impaired interaction with CCDC120, impairing microtubule regrowth. In utero electroporation knockdown causes profound neuronal migration deficits, altered laminar fate, and abnormal dendritic morphology. In utero electroporation (shRNA knockdown), CRISPR/Cas9 knockout, co-immunoprecipitation, microtubule regrowth assay, immunofluorescence, flow cytometry, scRNA-seq, spatial transcriptomics Journal of biomedical science Medium 41888776
2003 CEP170 was identified as a centrosomal protein by mass spectrometry-based protein correlation profiling of human centrosome fractions. Mass spectrometry, protein correlation profiling, centrosome fractionation, in vivo localization Nature Medium 14654843
2012 Super-resolution 3D-structured illumination microscopy (3D-SIM) revealed that CEP170 localizes as rings with multiple density masses at subdistal appendages of human centrioles, and the number of these density masses is strongly reduced during mitosis, providing structural detail about CEP170's spatial organization at the centrosome. 3D-structured illumination microscopy (3D-SIM), immunofluorescence with site-specific antibodies Biology open Medium 23213374

Source papers

Stage 0 corpus · 45 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 2861 17081983
2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America 1479 12477932
2013 Genome-wide association analysis identifies 13 new risk loci for schizophrenia. Nature genetics 1192 23974872
2015 The BioPlex Network: A Systematic Exploration of the Human Interactome. Cell 1118 26186194
2003 Proteomic characterization of the human centrosome by protein correlation profiling. Nature 1100 14654843
2017 Architecture of the human interactome defines protein communities and disease networks. Nature 1085 28514442
2015 A human interactome in three quantitative dimensions organized by stoichiometries and abundances. Cell 1015 26496610
2018 VIRMA mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell discovery 829 29507755
2003 Complete sequencing and characterization of 21,243 full-length human cDNAs. Nature genetics 754 14702039
2021 Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell 705 33961781
2011 Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in bioinformatics 656 21873635
2011 Global landscape of HIV-human protein complexes. Nature 593 22190034
2020 Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms. Science (New York, N.Y.) 564 33060197
2006 Hsp90 cochaperone Aha1 downregulation rescues misfolding of CFTR in cystic fibrosis. Cell 517 17110338
2004 The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome research 438 15489334
2015 A Dynamic Protein Interaction Landscape of the Human Centrosome-Cilium Interface. Cell 433 26638075
2022 OpenCell: Endogenous tagging for the cartography of human cellular organization. Science (New York, N.Y.) 432 35271311
2010 Systematic analysis of human protein complexes identifies chromosome segregation proteins. Science (New York, N.Y.) 421 20360068
2004 Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. Current biology : CB 386 15324660
2013 Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions. Science signaling 383 24255178
2004 14-3-3-affinity purification of over 200 human phosphoproteins reveals new links to regulation of cellular metabolism, proliferation and trafficking. The Biochemical journal 372 14744259
2006 Disrupted in Schizophrenia 1 Interactome: evidence for the close connectivity of risk genes and a potential synaptic basis for schizophrenia. Molecular psychiatry 345 17043677
2021 A proximity-dependent biotinylation map of a human cell. Nature 339 34079125
2012 Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins. Nature 319 22810586
2017 Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing. Proceedings of the National Academy of Sciences of the United States of America 282 28611215
2012 3D-structured illumination microscopy provides novel insight into architecture of human centrosomes. Biology open 268 23213374
2011 Novel asymmetrically localizing components of human centrosomes identified by complementary proteomics methods. The EMBO journal 265 21399614
2022 Tau interactome maps synaptic and mitochondrial processes associated with neurodegeneration. Cell 256 35063084
2014 Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes. Journal of proteomics 215 25281560
2016 An organelle-specific protein landscape identifies novel diseases and molecular mechanisms. Nature communications 211 27173435
2004 The forkhead-associated domain protein Cep170 interacts with Polo-like kinase 1 and serves as a marker for mature centrioles. Molecular biology of the cell 196 15616186
1997 Expression and clustered distribution of an inwardly rectifying potassium channel, KAB-2/Kir4.1, on mammalian retinal Müller cell membrane: their regulation by insulin and laminin signals. The Journal of neuroscience : the official journal of the Society for Neuroscience 169 9315894
2019 Modeling microcephaly with cerebral organoids reveals a WDR62-CEP170-KIF2A pathway promoting cilium disassembly in neural progenitors. Nature communications 158 31197141
1997 An ATP-dependent inwardly rectifying potassium channel, KAB-2 (Kir4. 1), in cochlear stria vascularis of inner ear: its specific subcellular localization and correlation with the formation of endocochlear potential. The Journal of neuroscience : the official journal of the Society for Neuroscience 129 9169531
2022 NAT10 promotes cell proliferation by acetylating CEP170 mRNA to enhance translation efficiency in multiple myeloma. Acta pharmaceutica Sinica. B 85 35967285
2012 The microtubule-binding protein Cep170 promotes the targeting of the kinesin-13 depolymerase Kif2b to the mitotic spindle. Molecular biology of the cell 47 23087211
2015 A Chlamydia effector recruits CEP170 to reprogram host microtubule organization. Journal of cell science 40 26220855
1998 Inwardly rectifying K+ channel in retinal Müller cells: comparison with the KAB-2/Kir4.1 channel expressed in HEK293T cells. The Japanese journal of physiology 25 9538292
2018 Ccdc61 controls centrosomal localization of Cep170 and is required for spindle assembly and symmetry. Molecular biology of the cell 21 30354798
2019 WDR62 is involved in spindle assembly by interacting with CEP170 in spermatogenesis. Development (Cambridge, England) 20 31533924
2024 Roles for CEP170 in cilia function and dynein-2 assembly. Journal of cell science 9 38533689
2024 METTL3-mediated CEP170 m6A modifications in spindle orientation and esophageal cancer cell proliferation. International immunopharmacology 3 39708485
2026 CEP170 as a novel molecular link between centrosomal function and cerebral cortical development. Journal of biomedical science 0 41888776
2026 Centromere protein CEP170 is dispensable for mouse spermatogenesis and male fertility. Theriogenology 0 41905261
2025 Current status of KAB in health education for Chinese college students and SEM validation exploration. Frontiers in public health 0 41080875