Affinage

Showing PTGFRNCD9P-1 is a alias.

PTGFRN

Prostaglandin F2 receptor negative regulator · UniProt Q9P2B2

Length
879 aa
Mass
98.6 kDa
Annotated
2026-06-10
22 papers in source corpus 15 papers cited in narrative 15 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 7/7 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PTGFRN is a transmembrane Ig-superfamily protein that serves as a near-stoichiometric organizing partner of the tetraspanins CD9 and CD81, with essentially all cell-surface PTGFRN found in discrete CD81/CD9-associated complexes distinct from integrin-containing tetraspanin assemblies (PMID:11087758). Cryo-EM resolves the structural basis of this organization: two PTGFRN molecules dimerize through their ectodomains while each engages a CD9 transmembrane helix, generating a conformationally flexible heterotetramer that provides a concatenation model for tetraspanin-enriched microdomain formation (PMID:32958604). Through a stretch of basic residues in its cytoplasmic domain, PTGFRN directly recruits ERM (ezrin-radixin-moesin) proteins, linking these microdomains to the actin cytoskeleton and governing cell motility and polarity (PMID:16690612). PTGFRN can also self-associate into tetraspanin-independent cis-oligomers and is heavily N-glycosylated across multiple surface isoforms (PMID:19703604, PMID:17960739). Functionally, it acts as a negative regulator of the prostaglandin F2α (FP) receptor by reducing receptor number in a non-competitive manner (PMID:8804121). In cancer, PTGFRN supports oncogenic signaling: its loss destabilizes PI3K p110β and lowers AKT phosphorylation (PMID:31377205), reduces ERK/AKT/mTOR signaling and stemness factors in glioma (PMID:35690717), and stabilizes STAT3 to drive BCAT1-dependent branched-chain amino acid metabolism in lung cancer (PMID:41130302). Truncated PTGFRN that retains CD81-binding depletes tetraspanins and PTGFRN from the endothelial surface and inhibits VEGF-dependent angiogenesis and tumor growth (PMID:21863033).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 1996 Medium

    Established the first functional role for PTGFRN by showing it suppresses prostaglandin F2α receptor signaling, defining it as a receptor-modulating membrane protein rather than a passive surface antigen.

    Evidence cDNA transfection in COS cells with radioligand binding and Scatchard analysis of FP receptor

    PMID:8804121

    Open questions at the time
    • Mechanism by which PTGFRN reduces FP receptor number is undefined
    • No structural or interaction data linking PTGFRN to the FP receptor
    • Single lab
  2. 2000 High

    Resolved which surface complexes PTGFRN occupies, showing it is an obligate, high-stoichiometry partner of CD9/CD81 in complexes separable from integrin-tetraspanin assemblies.

    Evidence Co-IP, immunodepletion, and gel permeation chromatography across multiple cell types

    PMID:11087758

    Open questions at the time
    • Did not define the molecular interface
    • Functional consequence of the association not tested
  3. 2006 High

    Connected the tetraspanin microdomain to the cytoskeleton by demonstrating PTGFRN directly recruits ERM proteins through a basic cytoplasmic motif, providing a mechanistic basis for its role in motility and polarity.

    Evidence GST pulldown with cytoplasmic fusion proteins, co-IP, confocal colocalization, dominant-negative moesin and siRNA

    PMID:16690612

    Open questions at the time
    • Quantitative contribution to actin linkage versus other ERM recruiters unknown
    • Regulation of the ERM interaction not addressed
  4. 2007 Medium

    Characterized PTGFRN as extensively N-glycosylated and exosome-targeted, indicating post-translational diversity and a route into secreted vesicles partly independent of tetraspanins.

    Evidence MS-based glycan structural analysis and exosome fractionation with co-IP after TPA treatment

    PMID:17407154 PMID:17960739

    Open questions at the time
    • Functional role of specific glycoforms not tested
    • Determinants of exosomal sorting unresolved
  5. 2009 Medium

    Mapped the CD81 interaction to transmembrane regions and revealed tetraspanin-independent cis-oligomerization, refining how PTGFRN assembles within and beyond the tetraspanin web.

    Evidence Chimeric molecule analysis with infection assays; in situ cross-linking with LC-MS/MS

    PMID:19703604 PMID:19762465

    Open questions at the time
    • Stoichiometry of oligomers not defined at the time
    • Link between Plasmodium restriction and oligomerization unexplored
  6. 2011 Medium

    Demonstrated therapeutic-relevant disruption: a CD81-binding truncated PTGFRN depletes tetraspanins from endothelium and blocks angiogenesis, implicating the complex in vascular and tumor biology.

    Evidence Co-precipitation, flow cytometry, in vitro angiogenesis assays, and in vivo tumor xenografts

    PMID:21863033

    Open questions at the time
    • Direct signaling pathway downstream of complex depletion not defined
    • IFITM5-induced CD9 dissociation finding rests on a single co-IP
  7. 2020 High

    Provided the atomic-level model for tetraspanin microdomain assembly, showing PTGFRN ectodomain dimers bridge two CD9 molecules in a flexible tetramer that can concatenate.

    Evidence Cryo-EM of the CD9–EWI-F complex with crystallographic validation of CD9 loop–nanobody binding

    PMID:32958604

    Open questions at the time
    • Structure with CD81 not determined
    • Cytoplasmic ERM-binding region not resolved in the structure
  8. 2025 Medium

    Extended PTGFRN into oncogenic signaling, showing it stabilizes signaling effectors (p110β, STAT3) and drives downstream pathways including BCAT1-mediated amino acid metabolism, ERK/AKT/mTOR, and stemness programs.

    Evidence shRNA/siRNA knockdown with western blot, nuclear fractionation, ChIP of STAT3 on BCAT1 promoter, and metabolic assays across GBM, glioma, and NSCLC models

    PMID:31377205 PMID:35690717 PMID:41130302

    Open questions at the time
    • Direct biochemical mechanism linking surface PTGFRN to intracellular p110β/STAT3 stabilization unclear
    • Whether these effects depend on tetraspanin association untested
    • Each readout from a single lab

Open questions

Synthesis pass · forward-looking unresolved questions
  • How PTGFRN's structurally defined membrane-organizing role mechanistically connects to its reported intracellular signaling effects (p110β, STAT3, ERK/mTOR) and to direct binding of Integrin β1/E-Cadherin remains unresolved.
  • Integrin β1 and E-Cadherin binding rest on single unreciprocated co-IPs
  • No mechanism links transmembrane scaffolding to cytoplasmic signaling stabilization
  • Autophagy and innate-immune effects defined only by proteomic profiling

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 3 GO:0008092 cytoskeletal protein binding 1 GO:0098772 molecular function regulator activity 1
Localization
GO:0005886 plasma membrane 3 GO:0031410 cytoplasmic vesicle 1
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-1500931 Cell-Cell communication 2
Complex memberships
CD9/CD81 tetraspanin-enriched microdomainCD9–EWI-F (PTGFRN) heterotetramer

Evidence

Reading pass · 15 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2000 PTGFRN (FPRP) associates specifically with CD81 and CD9 tetraspanins at very high stoichiometry (essentially 100% of cell-surface FPRP is CD81/CD9-associated), forming discrete complexes distinct from integrin-containing CD81 complexes, as determined by immunoprecipitation, immunodepletion, and gel permeation chromatography. Co-immunoprecipitation, immunodepletion, gel permeation chromatography, methyl-β-cyclodextrin cholesterol disruption The Journal of biological chemistry High 11087758
1996 PTGFRN (FPRP) expressed in COS cells inhibits [3H]PGF2α binding to the FP receptor in a dose-dependent, non-competitive manner (decreasing receptor number rather than affinity), demonstrating its role as a negative regulator of prostaglandin F2α receptor activity. cDNA transfection in COS cells, radioligand binding assay, Scatchard analysis, molecular dissection of FPRP protein domains Prostaglandins, leukotrienes, and essential fatty acids Medium 8804121
2006 PTGFRN (EWI-F) directly interacts with ezrin-radixin-moesin (ERM) proteins through a stretch of basic charged amino acids in its cytoplasmic domain, linking tetraspanin-associated microdomains to the actin cytoskeleton; this interaction regulates cell motility and polarity. Co-immunoprecipitation, GST pulldown with cytoplasmic domain fusion proteins, confocal microscopy colocalization, dominant-negative moesin N-terminal domain expression, siRNA knockdown The Journal of biological chemistry High 16690612
2009 PTGFRN (CD9P-1) acts as a negative regulator of Plasmodium yoelii sporozoite infection of hepatocytes by interacting with CD81 through their transmembrane regions; CD9P-1 chimeras that no longer associate with CD81 lose this inhibitory effect. siRNA knockdown, overexpression, chimeric molecule analysis, infection assays The Journal of biological chemistry Medium 19762465
2009 PTGFRN (CD9P-1) forms cis-oligomers at the cell surface independently of its association with tetraspanins CD9 or CD81; tetraspanin expression levels positively modulate the efficiency of CD9P-1 oligomerization. In situ chemical cross-linking on living cells, affinity purification, LC-MS/MS, western blot with differential tags Journal of proteomics Medium 19703604
2007 PTGFRN (CD9P-1) is targeted into exosomes and remains associated with CD81 in exosomes after TPA treatment; CD9P-1 can be targeted to exosomes independently of CD81 and CD9. TPA treatment of K562 cells, exosome isolation, co-immunoprecipitation, surface labeling and internalization assays Journal of cellular biochemistry Medium 17407154
2007 PTGFRN (CD9P-1) carries at least 9 engaged N-glycosylation sites bearing more than 40 different N-glycan structures (complex and high-mannose type), and exists as at least 17 glycosylated isoforms at the cell surface, all of which associate with CD9. PNGase F deglycosylation, FTICR-MS, MALDI-TOF MS, ESI-MS/MS, GC-MS, 2D-PAGE, lectin blot Proteomics Medium 17960739
2011 IFITM5 expression causes CD9 to dissociate from a FKBP11-CD81-[FPRP/CD9] complex, and this dissociation leads to increased expression of interferon-induced genes in osteoblasts. Co-immunoprecipitation, expression analysis of interferon-induced genes after complex perturbation Biochemical and biophysical research communications Low 21600883
2011 A truncated form of PTGFRN (GS-168AT2) corresponding to the region by which CD9P-1 physiologically associates with CD81 depletes CD151, CD9, and CD9P-1 from the endothelial cell surface, inhibiting VEGF-dependent angiogenesis, cell migration, and proliferation in vitro and tumor-associated angiogenesis in vivo. Co-precipitation, flow cytometry, in vitro angiogenesis/migration/proliferation assays, in vivo tumor xenograft model British journal of cancer Medium 21863033
2020 Cryo-EM structure of CD9 in complex with EWI-F (PTGFRN) reveals a tetrameric arrangement: two central EWI-F molecules dimerized through their ectodomains, and two CD9 molecules each bound to one EWI-F transmembrane helix via CD9 helices h3 and h4, with a flexible ~50° range of conformational arrangements providing a 'concatenation model' for tetraspanin-enriched microdomain formation. Cryo-EM structure determination, crystal structures of CD9 large extracellular loop bound to nanobodies Life science alliance High 32958604
2019 PTGFRN inhibition in GBM cells reduces PI3K p110β protein stability and decreases phosphorylated AKT levels, and also decreases nuclear p110β leading to reduced DNA damage sensing and repair. shRNA knockdown, western blot for p110β and p-AKT, nuclear fractionation, DNA damage repair assays Cancer letters Medium 31377205
2022 PTGFRN silencing in glioma cells reduces ERK, AKT, and mTOR signaling; also reduces stemness transcription factors (Olig2, Pou3f2, Sall2, Sox2) in glioma stem-like cells. shRNA stable knockdown, western blot for signaling pathway components, neurosphere and limiting dilution assays BMC cancer Medium 35690717
2024 PTGFRN directly binds Integrin β1 and E-Cadherin (identified as a novel direct binding partner), and PTGFRN knockdown impacts autophagy in cancer cells. Co-immunoprecipitation, shRNA knockdown, cDNA overexpression, autophagy assays Journal of cellular biochemistry Low 38924562
2024 PTGFRN co-immunoprecipitates with proteins involved in VEGF signaling and protein processing/metabolism in A431 cells; PTGFRN knockdown increases innate immune response pathways and decreases metabolic precursor synthesis and protein processing pathways. Co-immunoprecipitation followed by mass spectrometry (proteomics), shRNA knockdown with proteomic profiling ACS omega Low 38559916
2025 PTGFRN interacts with STAT3 and inhibits its degradation; accumulation of STAT3 enhances its binding to the BCAT1 gene promoter, boosting BCAT1 expression and branched-chain amino acid metabolism in non-small cell lung cancer cells. Co-immunoprecipitation, siRNA knockdown, chromatin immunoprecipitation (STAT3 binding to BCAT1 promoter), metabolic assays, western blot Biochemical pharmacology Medium 41130302

Source papers

Stage 0 corpus · 22 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 EWI-2 and EWI-F link the tetraspanin web to the actin cytoskeleton through their direct association with ezrin-radixin-moesin proteins. The Journal of biological chemistry 165 16690612
2000 FPRP, a major, highly stoichiometric, highly specific CD81- and CD9-associated protein. The Journal of biological chemistry 118 11087758
2011 Osteoblast-enriched membrane protein IFITM5 regulates the association of CD9 with an FKBP11-CD81-FPRP complex and stimulates expression of interferon-induced genes. Biochemical and biophysical research communications 40 21600883
2007 The transferrin receptor and the tetraspanin web molecules CD9, CD81, and CD9P-1 are differentially sorted into exosomes after TPA treatment of K562 cells. Journal of cellular biochemistry 37 17407154
2020 Implications for tetraspanin-enriched microdomain assembly based on structures of CD9 with EWI-F. Life science alliance 31 32958604
2019 The Ig superfamily protein PTGFRN coordinates survival signaling in glioblastoma multiforme. Cancer letters 28 31377205
2022 Integrative analysis of cell adhesion molecules in glioblastoma identified prostaglandin F2 receptor inhibitor (PTGFRN) as an essential gene. BMC cancer 27 35690717
1996 Negative regulatory activity of a prostaglandin F2 alpha receptor associated protein (FPRP). Prostaglandins, leukotrienes, and essential fatty acids 27 8804121
2011 A truncated form of CD9-partner 1 (CD9P-1), GS-168AT2, potently inhibits in vivo tumour-induced angiogenesis and tumour growth. British journal of cancer 20 21863033
2009 The Ig domain protein CD9P-1 down-regulates CD81 ability to support Plasmodium yoelii infection. The Journal of biological chemistry 20 19762465
2011 CD9P-1 expression correlates with the metastatic status of lung cancer, and a truncated form of CD9P-1, GS-168AT2, inhibits in vivo tumour growth. British journal of cancer 18 21206492
2009 In situ chemical cross-linking on living cells reveals CD9P-1 cis-oligomer at cell surface. Journal of proteomics 16 19703604
2007 Glycosylation status of the membrane protein CD9P-1. Proteomics 16 17960739
2016 The SDF-1 rs1801157 Polymorphism is Associated with Cancer Risk: An Update Pooled Analysis and FPRP Test of 17,876 Participants. Scientific reports 15 27265091
2015 The MIF -173G/C gene polymorphism increase gastrointestinal cancer and hematological malignancy risk: evidence from a meta-analysis and FPRP test. International journal of clinical and experimental medicine 11 26629098
2024 Effect of PTFGRN Expression on the Proteomic Profile of A431 Cells and Determination of the PTGFRN Interactome. ACS omega 9 38559916
2016 The BTNL2 G16071A gene polymorphism increases granulomatous disease susceptibility: A meta-analysis including FPRP test of 8710 participants. Medicine 9 27472712
2021 Identification of Prostaglandin F2 Receptor Negative Regulator (PTGFRN) as an internalizable target in cancer cells for antibody-drug conjugate development. PloS one 7 33503070
2024 Prostaglandin F2 Receptor Negative Regulator (PTGFRN) Expression Correlates With a Metastatic-like Phenotype in Epidermoid Carcinoma, Pediatric Medulloblastoma, and Mesothelioma. Journal of cellular biochemistry 5 38924562
2025 PTGFRN promotes non-small cell lung cancer malignant progression and reprograms BCAA metabolism by activating STAT3/BCAT1 pathway. Biochemical pharmacology 2 41130302
2025 8C7: A Fully Human Anti-PTGFRN Monoclonal Antibody-Drug Conjugate Inhibiting Tumour Growth of Mesothelioma and Paediatric Medulloblastoma Cell Lines. Journal of cellular and molecular medicine 1 40551322
2026 Pan-cancer analysis reveals the oncogenic and immunomodulatory roles of PTGFRN across human cancers. Scientific reports 0 41748870

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