Affinage

VSIG2

V-set and immunoglobulin domain-containing protein 2 · UniProt Q96IQ7

Length
327 aa
Mass
34.3 kDa
Annotated
2026-06-11
24 papers in source corpus 3 papers cited in narrative 3 extracted findings
Cross-family judge faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

VSIG2 is an immunoglobulin-superfamily cell-surface protein that exerts context-dependent, tissue-specific roles in cancer progression and immune regulation (PMID:37626304, PMID:41350674, PMID:41185558). As an immunosuppressive ligand on activated antigen-presenting cells, VSIG2 binds Nectin-2 — but not PD-1 or CTLA-4 — and strongly inhibits T cell activation and proliferation through the STAT1/IRF1/GBP2 signaling axis; a VSIG2-Ig fusion alleviated experimental autoimmune encephalomyelitis, while anti-VSIG2 antibodies suppressed pancreatic cancer growth in vivo (PMID:41350674). In pancreatic ductal adenocarcinoma cells, VSIG2 acts intracellularly as a scaffold that simultaneously binds LAMTOR2 and mTOR, enhancing their interaction and driving mTOR phosphorylation and downstream signaling to promote proliferation, invasion, and migration (PMID:37626304). In gastric cancer, by contrast, VSIG2 is tumor-suppressive: it directly binds ANXA2 at the membrane and competes with FBXW10, promoting FBXW10-mediated K63 polyubiquitination and membrane localization of ANXA2, thereby inactivating NF-κB and restraining proliferation and migration (PMID:41185558). The structural basis of these interactions and how a single protein partitions between surface ligand and intracellular scaffold functions have not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2023 Medium

    Established the first molecular mechanism for VSIG2 in cancer by identifying it as an intracellular scaffold linking LAMTOR2 to mTOR activation.

    Evidence Mass spectrometry, reciprocal co-immunoprecipitation, immunofluorescence, functional assays and xenografts with VSIG2 overexpression/knockdown in pancreatic ductal adenocarcinoma cells

    PMID:37626304

    Open questions at the time
    • No structural definition of the LAMTOR2/mTOR-bridging interface
    • Whether the scaffold function operates at a specific subcellular compartment is not resolved
    • Single lab, no independent replication
  2. 2025 Medium

    Identified VSIG2 as a tumor-suppressive partner of ANXA2 in gastric cancer, defining a competitive-binding/ubiquitination mechanism opposite to its pancreatic role.

    Evidence Reciprocal co-immunoprecipitation, ubiquitination assays, immunofluorescence, in vitro proliferation/migration assays and subcutaneous plus liver-metastasis mouse models in gastric cancer cells

    PMID:41185558

    Open questions at the time
    • Mechanism by which K63-ubiquitinated ANXA2 inactivates NF-κB not detailed
    • Reason for opposite tumor role versus pancreatic cancer unexplained
    • Single lab, no independent replication
  3. 2025 Medium

    Defined VSIG2 as a cell-surface immunosuppressive ligand, identifying Nectin-2 as its receptor and the STAT1/IRF1/GBP2 axis as the downstream T cell pathway.

    Evidence Ligand-receptor binding assays, T cell activation/proliferation assays, in vivo EAE and pancreatic cancer models, pathway analysis

    PMID:41350674

    Open questions at the time
    • Structural basis of VSIG2-Nectin-2 binding not determined
    • How surface ligand activity reconciles with reported intracellular scaffold function is unclear
    • Single lab, no independent replication

Open questions

Synthesis pass · forward-looking unresolved questions
  • How VSIG2 partitions between cell-surface immune-ligand and intracellular scaffold/adaptor functions, and what determines its opposing pro- versus anti-tumor roles across tissues, remains unresolved.
  • No structural model for any VSIG2 interaction
  • No reconciliation of surface versus intracellular localization across contexts
  • Determinants of context-dependent tumor outcome unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2 GO:0048018 receptor ligand activity 1
Localization
GO:0005886 plasma membrane 2
Pathway
R-HSA-162582 Signal Transduction 2 R-HSA-168256 Immune System 1

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2023 VSIG2 acts as a scaffold protein that simultaneously binds LAMTOR2 and mTOR, enhancing their interaction and resulting in elevated phosphorylation-mediated activation of mTOR and downstream signaling molecules, thereby promoting proliferation, invasion, and migration of pancreatic ductal adenocarcinoma cells. Mass spectrometry, co-immunoprecipitation, immunofluorescence, western blotting, CCK-8/colony formation/Transwell assays, subcutaneous xenograft tumor model, VSIG2 overexpression and knockdown Cell communication and signaling : CCS Medium 37626304
2025 VSIG2 functions as an immunosuppressive ligand on the surface of activated antigen-presenting cells, specifically binding Nectin-2 (but not PD-1 or CTLA-4), and strongly inhibiting T cell activation and proliferation; this interaction regulates the STAT1/IRF1/GBP2 signaling pathway in T cells. VSIG2-Ig protein alleviated experimental autoimmune encephalomyelitis symptoms, and anti-VSIG2 antibodies inhibited pancreatic cancer growth in vivo. Binding assays (ligand-receptor interaction), T cell activation/proliferation assays, in vivo EAE model, in vivo pancreatic cancer model, pathway analysis (STAT1/IRF1/GBP2) Journal of neuroinflammation Medium 41350674
2025 VSIG2 directly interacts with ANXA2 (Annexin A2) at the cell membrane in gastric cancer cells and competes with FBXW10 for binding to ANXA2. Highly expressed VSIG2 relies on FBXW10-mediated K63 polyubiquitination of ANXA2 to induce membrane localization of ANXA2, which inactivates NF-κB and suppresses gastric cancer cell proliferation and migration. Co-immunoprecipitation, immunofluorescence, ubiquitination assays, CCK-8, EdU, Transwell, wound healing assays, nude mouse subcutaneous tumor model, liver metastasis model, western blot, qRT-PCR, IHC Acta biochimica et biophysica Sinica Medium 41185558

Source papers

Stage 0 corpus · 24 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2010 Trait-stratified genome-wide association study identifies novel and diverse genetic associations with serologic and cytokine phenotypes in systemic lupus erythematosus. Arthritis research & therapy 91 20659327
2023 Myeloperoxidase Inhibition Reverses Biomarker Profiles Associated With Clinical Outcomes in HFpEF. JACC. Heart failure 41 37140510
2014 Protective effect of astragalus polysaccharides on liver injury induced by several different chemotherapeutics in mice. Asian Pacific journal of cancer prevention : APJCP 39 25556485
2021 Circulating Plasma Biomarkers in Biopsy-Confirmed Kidney Disease. Clinical journal of the American Society of Nephrology : CJASN 28 34759008
2020 TMT proteomics analysis of intestinal tissue from patients of irritable bowel syndrome with diarrhea: Implications for multiple nutrient ingestion abnormality. Journal of proteomics 28 33011346
2023 Identification of the novel therapeutic targets and biomarkers associated of prostate cancer with cancer-associated fibroblasts (CAFs). Frontiers in oncology 15 36937411
2022 Integrated proteomic and phosphoproteomic analysis for characterization of colorectal cancer. Journal of proteomics 15 36596410
2023 VSIG2 promotes malignant progression of pancreatic ductal adenocarcinoma by enhancing LAMTOR2-mediated mTOR activation. Cell communication and signaling : CCS 13 37626304
2022 Periodontal Disease Augments Cardiovascular Disease Risk Biomarkers in Rheumatoid Arthritis. Biomedicines 13 35327515
2022 Common physiologic and proteomic biomarkers in pulmonary and coronary artery disease. PloS one 8 35263363
2019 Phosphorylation of Fibronectin Influences the Structural Stability of the Predicted Interchain Domain. Journal of chemical information and modeling 6 31509400
2023 Protein Biomarkers and Major Cardiovascular Events in Older People With Advanced CKD: The European Quality (EQUAL) Study. Kidney medicine 5 38162538
2024 Knockdown of the long noncoding RNA VSIG2-1:1 promotes the angiogenic ability of human pulmonary microvascular endothelial cells by activating the VEGF/PI3K/AKT pathway. Respiratory research 4 39568008
2024 Protein signatures associated with loneliness and social isolation: Plasma proteome analyses in the English Longitudinal Study of Ageing, with causal evidence from Mendelian randomization. Brain, behavior, and immunity 4 39586554
2025 Lactate metabolism-related genes serve as potential biomarkers for predicting gastric cancer progression and immunotherapy. Discover oncology 3 40473996
2025 Linear and non-linear proteome-wide association studies provide novel insight into venous thromboembolism. Nature communications 1 40664692
2024 Targeted proteomics involved in cardiovascular health and heart rate variability in children with overweight/obesity. American journal of human biology : the official journal of the Human Biology Council 1 38864311
2024 Identification and functional analysis of genes mediating osteoclast-driven progression of osteoporosis. Science progress 1 39587887
2026 Integrated multi-omics characterization of SPTBN2 overexpression reveals its pro-tumorigenic role and immune microenvironment remodeling in colorectal cancer. Frontiers in cell and developmental biology 0 42238893
2025 Plasma proteomic signatures of social support and their association with cardiovascular disease and mortality. medRxiv : the preprint server for health sciences 0 40832392
2025 VSIG2 hinders gastric cancer progression by suppressing ANXA2-mediated NF-κB pathway activation. Acta biochimica et biophysica Sinica 0 41185558
2025 VSIG2 as a novel immunosuppressive ligand interacts with Nectin-2 to regulate T cell responses. Journal of neuroinflammation 0 41350674
2025 Genetic insights into colorectal cancer pathogenesis: a multi-omics and immunity perspective. Translational cancer research 0 41378022
2024 Protein signatures associated with loneliness and social isolation: plasma proteome analyses in the English Longitudinal Study of Ageing, with causal evidence from Mendelian randomization. medRxiv : the preprint server for health sciences 0 39211870

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