| 2013 |
UBE3C enhances proteasome processivity by ubiquitinating partially proteolyzed substrates; knockdown causes slower and incomplete degradation of destabilizing domain-GFP reporters, and this processivity function requires UBE3C catalytic activity, its ability to bind the proteasome, and lysine residues on the substrate. |
Forward genetic screen, siRNA knockdown, active-site mutagenesis, proteasome-binding mutants, substrate lysine-less mutants, polyubiquitination assays |
The Journal of biological chemistry |
High |
24158444
|
| 2017 |
UBE3C (and USP14) dynamically cycle on and off the 26S proteasome, and the presence of ubiquitinated substrate proteins promotes their stable association; ubiquitin conjugates on the proteasome also enhance USP14 binding, which in turn further stabilizes UBE3C binding. |
Biochemical fractionation, purified proteasome binding assays with recombinant USP14, inhibitor treatments (IU-1, ubiquitin aldehyde), cell-based ubiquitination blockade experiments |
Proceedings of the National Academy of Sciences of the United States of America |
High |
28396413
|
| 2019 |
Acute protein misfolding (unfolding of AgDD) rapidly recruits UBE3C to the 26S proteasome and triggers ubiquitylation of the proteasomal ubiquitin receptors RPN10 and RPN13; this is an immediate cellular response to misfolded monomers/oligomers rather than insoluble aggregates. |
Global diglycine-capture (K-GG) ubiquitin proteomics, engineered FKBP-based destabilizing domain system, quantitative MS |
The Journal of biological chemistry |
High |
31375563
|
| 2020 |
Crystal structure of the UBE3C HECT domain (aa 693–1083) at 2.7 Å reveals an open, L-shaped bilobed conformation; Lys903 is the major autoubiquitination site; deletion of the last three C-terminal residues abolishes activity; mutations of Gln961 and Ser1049 substantially reduce autoubiquitination; the N-terminal region (aa 693–743) and a loop (aa 758–762) in the N-lobe affect stability and activity; these regions are involved in E2-E3 transthiolation. |
X-ray crystallography (2.7 Å), in vitro ubiquitination assays, site-directed mutagenesis, deletion analysis |
The Biochemical journal |
High |
32039437
|
| 2021 |
UBE3C assembles K29/K48-branched ubiquitin chains on VPS34, promoting VPS34 binding to proteasomes and its degradation, thereby suppressing autophagosome formation and maturation; TRABID deubiquitinase reverses this modification. Under ER/proteotoxic stress, UBE3C is redistributed from phagophores to proteasomes, attenuating VPS34 ubiquitination and elevating autophagy. |
Co-immunoprecipitation, ubiquitin chain-linkage mass spectrometry, in vitro ubiquitination assays, siRNA knockdown, live-cell imaging, subcellular fractionation, in vivo liver metabolic studies |
Nature communications |
High |
33637724
|
| 2021 |
UBE3C interacts with ERα during mitosis in an estrogen-dependent manner; estrogen stimulates UBE3C E3 ligase activity in the presence of ERα in vitro; UBE3C ubiquitinates cyclin B1 (CCNB1) and promotes its degradation during mitosis; ERα, UBE3C, and CCNB1 co-localize in prophase nuclei and metaphase spindles; UBE3C depletion attenuates estrogen-dependent cell proliferation. |
Co-immunoprecipitation from mitotic MCF-7 cells, in vitro E3 ubiquitin ligase assay, siRNA knockdown, immunofluorescence co-localization |
Molecular endocrinology (Baltimore, Md.) |
Medium |
26389696
|
| 2021 |
UBE3C promotes ubiquitination and proteasomal degradation of AXIN1, thereby increasing β-catenin nuclear accumulation and activating Wnt/β-catenin signaling in gastric cancer cells; knockdown increases AXIN1 and reduces nuclear β-catenin. |
Co-immunoprecipitation, ubiquitination assay, siRNA knockdown and overexpression, xenograft mouse model, western blot |
Carcinogenesis |
Medium |
32930707
|
| 2022 |
Ube3c targets progesterone receptor (PR) for polyubiquitination and proteasomal degradation; P38α kinase phosphorylates Ube3c at serine 741, restraining its polyubiquitination activity toward PR; uterine-selective P38α deletion leads to excessive Ube3c-mediated PR degradation, defective uterine receptivity, and female infertility. |
Conditional knockout mouse model, Co-immunoprecipitation, ubiquitination assay, phosphorylation site mutagenesis, genetic rescue experiments |
Proceedings of the National Academy of Sciences of the United States of America |
High |
35914132
|
| 2024 |
UBE3C assembles K33-branched ubiquitin chains on ATG4B at Lys119 without causing ATG4B degradation; this ubiquitination inhibits ATG4B activity and its interaction with LC3, suppressing autophagy flux; under starvation, the ATG4B–UBE3C interaction decreases with concomitant removal of K33-branched chains, allowing starvation-induced autophagy. |
Mass spectrometry identification, Co-immunoprecipitation, in vitro ubiquitination assay, site-directed mutagenesis (K119R ATG4B), autophagy flux assays, overexpression/knockout cell studies |
Autophagy |
High |
38146933
|
| 2024 |
UBE3C sequentially follows BAP1 to control IRF3 stability during viral infection: in the early innate immune phase, BAP1 removes K48-linked ubiquitination from IRF3 in the nucleus; in the late phase, IFN-β-induced UBE3C mediates K48-linked ubiquitination of IRF3, promoting its proteasomal degradation to resolve the antiviral response. |
Co-immunoprecipitation, ubiquitination assay, siRNA knockdown, overexpression, temporal analysis of viral infection stages |
Cell reports |
Medium |
39120972
|
| 2024 |
UBE3C facilitates ERAD of misfolded CFTR (ΔF508) and ΔY490-ABCB1 independently of RNF185/RNF5; UBE3C knockdown has limited impact on CFTR ubiquitination itself but stabilizes mature ΔF508-CFTR and increases its plasma membrane expression, as well as stabilizing a class VI CFTR mutant (T70-CFTR). |
siRNA knockdown, cell surface biotinylation, western blot, functional channel assays, combined RNF5/185 ablation with UBE3C knockdown |
Cells |
Medium |
38067172
|
| 2024 |
UBE3C binds the 2C protein of EV-A71 (via its C-terminal domain) and promotes K33/K48-linked ubiquitination of 2C at Lys268, leading to its degradation and restriction of viral replication; the K268R mutant 2C resists UBE3C-mediated degradation; UBE3C also ubiquitinates 2C from CVB3 and CVA16. |
Co-immunoprecipitation, in vitro ubiquitination assay, site-directed mutagenesis (2C K268R), recombinant virus experiments, siRNA knockdown and overexpression, viral titer measurement |
Journal of virology |
Medium |
39212385
|
| 2024 |
Acute lower-level misfolded protein aggregates (oligomers) are degraded via a UBE3C-dependent proteasomal pathway that is independent of RPN13 ubiquitylation by UBE3C; higher aggregate burden activates NRF1-dependent proteasome upregulation instead; no evidence for autophagy involvement in aggregate turnover. |
Inducible agDD-GFP aggregate system, targeted gene knockdown, cryo-electron tomography, quantitative protein degradation assays |
Proceedings of the National Academy of Sciences of the United States of America |
High |
39636856
|
| 2025 |
UBE3C interacts with BRAF V600E via the kinase domain and promotes its ubiquitination; BRAF V600E stability is modulated by UBE3C expression and also depends on HSP90 activity; UBE3C knockout increases BRAF V600E levels in multiple myeloma cells. |
Tandem affinity purification, Co-immunoprecipitation, ubiquitination assay, HSP90 inhibitor treatment, CRISPR/siRNA knockdown |
Life sciences |
Low |
40602747
|
| 2025 |
UBE3C catalyzes p53 ubiquitination, promoting its proteasomal degradation in pancreatic ductal adenocarcinoma cells; UBE3C knockdown increases p53 levels and promotes apoptosis, effects reversed by the p53 inhibitor pifithrin-α. |
Co-immunoprecipitation, ubiquitination assay, siRNA knockdown and overexpression, pharmacological p53 inhibitor rescue, cell proliferation and apoptosis assays |
Molecular biology reports |
Low |
40553397
|
| 2025 |
The SLAP adaptor protein interacts with mLST8 and recruits UBE3C to mediate non-degradative ubiquitination of mLST8 at Lys86 and Lys215, reducing mTORC2 complex integrity and suppressing mTORC2-AKT signaling in colorectal cancer cells. |
Co-immunoprecipitation, ubiquitination assay with mutagenesis (K86R/K215R), Co-IP of SLAP-UBE3C interaction, mTORC2 integrity assays, xenograft mouse model |
Cell death and differentiation |
Medium |
41398047
|
| 2025 |
UBE3C regulates cellular composition of the murine cerebral cortex and human brain organoids; its loss favors neurogenesis and suppresses glial fate; disease-associated UBE3C mutations alter autoubiquitination activity and disrupt cortical lamination; proteomic profiling identifies Cbll1 (a m6A methyltransferase component) as a UBE3C substrate; the UBE3C–Cbll1 axis drives m6A mRNA methylation in neural progenitors; hyperactivation of m6A writers in UBE3C-deficient progenitors impairs cell cycle exit, reversible by the METTL3 inhibitor STM2457. |
Genetic complementation in mouse and human brain organoids, proteomic substrate profiling, autoubiquitination assays, disease-variant mutagenesis, METTL3 inhibitor rescue in vivo |
bioRxivpreprint |
Medium |
bio_10.1101_2025.04.09.646620
|
| 2025 |
PhIX-MS crosslinking coupled with cryo-EM places UBE3C/Hul5 along the 19S regulatory particle (RP) of the proteasome with its catalytic HECT domain positioned above the RPN11 deubiquitinase active site, enabling coupled ubiquitination and deubiquitination activities at the proteasome entry channel. |
Photo-induced in situ crosslinking mass spectrometry (PhIX-MS), cryo-electron microscopy, AlphaFold structural modeling |
bioRxivpreprint |
Medium |
bio_10.1101_2025.07.31.667872
|
| 2025 |
CRISPR loss-of-function screen in multiple myeloma cells shows UBE3C knockout markedly increases endogenous MYC protein levels, suggesting UBE3C negatively regulates MYC; paralogs UBE3A and UBE3B showed no measurable effect, indicating specificity. |
Genome-wide CRISPR-Cas9 loss-of-function screen, endogenous MYC-GFP reporter, FACS sorting, next-generation sequencing, functional validation of individual knockouts |
Scientific reports |
Low |
41965876
|
| 2023 |
UBE3C mediates ubiquitination-dependent proteasomal degradation of TP73, contributing to radioresistance in breast cancer cells; FOSB transcriptionally activates UBE3C, and LINC00963 recruits FOSB to the UBE3C promoter. |
Co-immunoprecipitation, immunofluorescence, siRNA knockdown and overexpression, in vitro/in vivo functional assays, rescue experiments |
Journal of translational medicine |
Low |
37173692
|
| 2025 |
UBE3C promotes ubiquitination and degradation of AHNAK protein in osteosarcoma cells, suppressing ferroptosis; METTL5-mediated m6A modification of UBE3C mRNA enhances its stability via YTHDF1 binding. |
Co-immunoprecipitation, ubiquitination assay, siRNA knockdown, ferroptosis assays, m6A methylation analysis |
Journal of molecular histology |
Low |
40696164
|