Affinage

SLA

Src-like-adapter · UniProt Q13239

Length
276 aa
Mass
31.2 kDa
Annotated
2026-06-10
100 papers in source corpus 3 papers cited in narrative 3 extracted findings
Cross-family judge vs UniProt: UniProt preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SLA (hSLAP) is a Src-like adaptor protein that contains SH3 and SH2 domains but lacks a tyrosine kinase catalytic domain, structurally resembling Src family kinases while acting as an adaptor rather than an enzyme (PMID:9660183). The gene is embedded within the largest intron of the thyroglobulin gene on chromosome 8q24 and is transcribed in the opposite orientation, with highest expression detected in fetal brain and lung and two alternatively spliced isoforms (PMID:9660183). In acute lymphoblastic leukemia cells, SLA is a prominent glucocorticoid response gene, but neither its overexpression nor its knockdown alters cell survival, cell cycle progression, or sensitivity to glucocorticoid-induced apoptosis, indicating it does not mediate the anti-leukemic effects of glucocorticoids in this context (PMID:19631983). Beyond its domain architecture and this negative functional result, the receptor-signaling role of SLA is largely uncharacterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 1995 Low

    Establishing where SLA lies in the genome and that it is an adaptor rather than a kinase framed it as a potential modulator of receptor tyrosine kinase signaling.

    Evidence Linkage analysis and somatic cell hybrid panel mapping placing mouse Slap on chromosome 15 and human SLA on 8q22.3-qter, with domain characterization

    PMID:8825655

    Open questions at the time
    • Eck receptor binding was cited from prior work, not directly demonstrated here
    • no functional consequence of the adaptor–receptor interaction tested
    • mapping resolution did not define the precise locus relationship later refined
  2. 1998 Medium

    Cloning the human gene defined its protein product, isoforms, and unusual genomic embedding, providing the molecular foundation for any mechanistic study.

    Evidence Exon trapping, cDNA cloning from a fetal brain library, Northern blot, and sequence analysis

    PMID:9660183

    Open questions at the time
    • no mechanistic or interaction experiments performed
    • functional significance of the two splice isoforms unknown
    • biological role of fetal brain/lung enrichment not addressed
  3. 2009 Medium

    Testing whether SLA, a strong glucocorticoid-induced transcript, drives steroid-induced leukemic cell death resolved a candidate mechanism by ruling it out.

    Evidence Overexpression and siRNA knockdown in ALL cell lines with viability, cell cycle, and apoptosis readouts

    PMID:19631983

    Open questions at the time
    • negative result does not exclude roles in other cell types or signaling contexts
    • direct molecular targets or partners of SLA not identified
    • reason for its strong glucocorticoid induction left unexplained

Open questions

Synthesis pass · forward-looking unresolved questions
  • The direct molecular function of SLA — which receptors or substrates it engages through its SH3/SH2 domains and what downstream signaling it modulates — remains undefined in the available corpus.
  • no validated physical partner demonstrated in human cells
  • no signaling pathway directly attributed to SLA
  • physiological function in fetal brain/lung uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 1

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1998 The human SLA (hSLAP) gene was identified as embedded within the largest intron (64-kb) of the thyroglobulin gene on chromosome 8q24, encoding a 276 amino acid protein with SH3 and SH2 domains but lacking a catalytic tyrosine kinase domain. It is transcribed in the opposite direction to thyroglobulin. The highest expression was detected in fetal brain and lung. Two alternatively spliced isoforms were identified. Exon trapping, cDNA cloning from fetal brain library, Northern blot, sequence analysis European journal of biochemistry Medium 9660183
1995 The mouse Slap gene was mapped by linkage analysis to mouse chromosome 15, and its putative human homolog SLA was mapped to human chromosome 8q22.3-qter using somatic cell hybrid panels. SLA/SLAP was characterized as an adaptor protein containing SH3 and SH2 domains homologous to Src family kinases but lacking a tyrosine kinase catalytic domain, and shown to bind activated Eck receptor protein-tyrosine kinase. Linkage analysis, somatic cell hybrid panel mapping Genomics Low 8825655
2009 Overexpression and knockdown of SLA in acute lymphoblastic leukemia (ALL) cell lines showed that SLA alone had no effect on cell survival, cell cycle progression, or sensitivity to glucocorticoid (GC)-induced apoptosis, despite SLA being a prominent glucocorticoid response gene. SLA does not contribute to the anti-leukemic effects of glucocorticoids in this context. Overexpression and siRNA knockdown in ALL cell lines, cell viability assays, cell cycle analysis, apoptosis assays Leukemia research Medium 19631983

Source papers

Stage 0 corpus · 100 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1999 Hephaestin, a ceruloplasmin homologue implicated in intestinal iron transport, is defective in the sla mouse. Nature genetics 825 9988272
2002 The use of reduced healing times on ITI implants with a sandblasted and acid-etched (SLA) surface: early results from clinical trials on ITI SLA implants. Clinical oral implants research 430 11952734
1993 Synthetic-lethal interactions identify two novel genes, SLA1 and SLA2, that control membrane cytoskeleton assembly in Saccharomyces cerevisiae. The Journal of cell biology 261 8335689
2000 Identification of target antigen for SLA/LP autoantibodies in autoimmune hepatitis. Lancet (London, England) 223 10801173
2017 Humoral Reactivity of Renal Transplant-Waitlisted Patients to Cells From GGTA1/CMAH/B4GalNT2, and SLA Class I Knockout Pigs. Transplantation 191 28114170
2008 Molecular genetics of the swine major histocompatibility complex, the SLA complex. Developmental and comparative immunology 147 18760302
2002 Establishment of standardised SLA/LP immunoassays: specificity for autoimmune hepatitis, worldwide occurrence, and clinical characteristics. Gut 122 12117891
1999 Genetic study of interactions between the cytoskeletal assembly protein sla1 and prion-forming domain of the release factor Sup35 (eRF3) in Saccharomyces cerevisiae. Genetics 106 10471702
1994 Evidence that activation of human T cells by porcine endothelium involves direct recognition of porcine SLA and costimulation by porcine ligands for LFA-1 and CD2. Transplantation 96 7912457
2012 The roles of PI3K/Akt signaling pathway in regulating MC3T3-E1 preosteoblast proliferation and differentiation on SLA and SLActive titanium surfaces. Journal of biomedical materials research. Part A 86 22941963
2011 Enhancing DNA immunization by targeting ASFV antigens to SLA-II bearing cells. Vaccine 81 21679736
1995 Direct recognition of SLA- and HLA-like class II antigens on porcine endothelium by human T cells results in T cell activation and release of interleukin-2. Transplantation 79 7491676
2005 Nomenclature for factors of the SLA class-I system, 2004. Tissue antigens 77 15713212
2008 The biocompatibility of SLA-treated titanium implants. Biomedical materials (Bristol, England) 73 18458368
2004 The Rsp5 ubiquitin ligase binds to and ubiquitinates members of the yeast CIN85-endophilin complex, Sla1-Rvs167. The Journal of biological chemistry 71 14761940
2007 Histological and immunohistochemical analysis of initial and early subepithelial connective tissue attachment at chemically modified and conventional SLA titanium implants. A pilot study in dogs. Clinical oral investigations 68 17361452
2013 Osteoblastic and osteoclastic differentiation on SLA and hydrophilic modified SLA titanium surfaces. Clinical oral implants research 66 23560589
1995 Directed integration of the physical and genetic linkage maps of swine chromosome 7 reveals that the SLA spans the centromere. Genome research 61 8593613
2015 A Pan1/End3/Sla1 complex links Arp2/3-mediated actin assembly to sites of clathrin-mediated endocytosis. Molecular biology of the cell 57 26337384
2001 Soluble liver antigen: isolation of a 35-kd recombinant protein (SLA-p35) specifically recognizing sera from patients with autoimmune hepatitis. Hepatology (Baltimore, Md.) 55 11230739
2012 SLAC, a complex between Sla1 and Las17, regulates actin polymerization during clathrin-mediated endocytosis. Molecular biology of the cell 49 22973053
2005 Rapid assignment of the swine major histocompatibility complex (SLA) class I and II genotypes in Clawn miniature swine using PCR-SSP and PCR-RFLP methods. Xenotransplantation 46 15693842
2014 Anti-SLA/LP alone or in combination with anti-Ro52 and fine specificity of anti-Ro52 antibodies in patients with autoimmune hepatitis. Liver international : official journal of the International Association for the Study of the Liver 43 25113420
2012 Mg ion implantation on SLA-treated titanium surface and its effects on the behavior of mesenchymal stem cell. Materials science & engineering. C, Materials for biological applications 42 23827608
1989 Genetic and other effects on antibody and cell mediated immune response in swine leucocyte antigen (SLA)-defined miniature pigs. Animal genetics 40 2527014
2019 HLA Class I-sensitized Renal Transplant Patients Have Antibody Binding to SLA Class I Epitopes. Transplantation 39 30951017
2018 Multifunctional effects of a modification of SLA titanium implant surface with strontium-containing nanostructures on immunoinflammatory and osteogenic cell function. Journal of biomedical materials research. Part A 37 30192064
2021 Immunogenic and efficacious SARS-CoV-2 vaccine based on resistin-trimerized spike antigen SmT1 and SLA archaeosome adjuvant. Scientific reports 36 34750472
2019 Triple (GGTA1, CMAH, B2M) modified pigs expressing an SLA class Ilow phenotype-Effects on immune status and susceptibility to human immune responses. American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons 34 31733031
2002 Anti-soluble liver antigen/liver-pancreas (SLA/LP) antibodies in pediatric patients with autoimmune hepatitis. Autoimmunity 32 12765473
2012 Cdc28-Cln3 phosphorylation of Sla1 regulates actin patch dynamics in different modes of fungal growth. Molecular biology of the cell 30 22787279
1995 Polymerase chain reaction based genotyping for characterization of SLA-DQB and SLA-DRB alleles in domestic pigs. Animal genetics 30 7537478
2015 Using a split luciferase assay (SLA) to measure the kinetics of cell-cell fusion mediated by herpes simplex virus glycoproteins. Methods (San Diego, Calif.) 29 26022509
2012 Cationic liposomes containing soluble Leishmania antigens (SLA) plus CpG ODNs induce protection against murine model of leishmaniasis. Parasitology research 29 22223037
2009 Swine leukocyte antigen (SLA) diversity in Sinclair and Hanford swine. Developmental and comparative immunology 28 19782700
2014 Immunoliposomes containing Soluble Leishmania Antigens (SLA) as a novel antigen delivery system in murine model of leishmaniasis. Experimental parasitology 26 25246326
1978 Iron deficiency anaemia in newborn sla mice: a genetic defect of placental iron transport. British journal of haematology 26 708646
2013 Effects of Er: YAG laser irradiation on wettability, surface roughness, and biocompatibility of SLA titanium surfaces: an in vitro study. Lasers in medical science 25 23760881
2003 Nucleotide sequencing analysis of the swine 433-kb genomic segment located between the non-classical and classical SLA class I gene clusters. Immunogenetics 25 14673549
2019 The TLR4 agonist adjuvant SLA-SE promotes functional mucosal antibodies against a parenterally delivered ETEC vaccine. NPJ vaccines 24 31149350
2015 PRRSV-infected monocyte-derived dendritic cells express high levels of SLA-DR and CD80/86 but do not stimulate PRRSV-naïve regulatory T cells to proliferate. Veterinary research 24 25990845
2008 Trypanosome spliced-leader-associated RNA (SLA1) localization and implications for spliced-leader RNA biogenesis. Eukaryotic cell 24 19028994
2006 Reconstruction of a swine SLA-I protein complex and determination of binding nonameric peptides derived from the foot-and-mouth disease virus. Veterinary immunology and immunopathology 24 16870265
1989 Possible relationships between SLA and porcine reproduction. Reproduction, nutrition, development 24 2513834
1981 Transplantation in miniature swine. X. Evidence for non-SLA-linked immune response gene(s) controlling rejection of SLA-matched kidney allografts. Transplantation 24 6800077
2008 Trypanosoma brucei spliced leader RNA maturation by the cap 1 2'-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex. Molecular and cellular biology 23 19103757
2003 Low frequency of anti-SLA/LP autoantibody in Japanese adult patients with autoimmune liver diseases: analysis with recombinant antigen assay. Journal of autoimmunity 23 12892738
1992 Modulation of splenic macrophages, and swine leukocyte antigen (SLA) and viral antigen expression following African swine fever virus (ASFV) inoculation. Archives of virology 23 1550493
2011 In vitro and in vivo evaluation of SLA titanium surfaces with further alkali or hydrogen peroxide and heat treatment. Biomedical materials (Bristol, England) 22 21293055
2009 SLA/LP/tRNP((Ser)Sec) antigen in autoimmune hepatitis: identification of the native protein in human hepatic cell extract. Journal of autoimmunity 22 19683415
1999 A selective genetic analysis of the Syracuse high- and low-avoidance (SHA/Bru and SLA/Bru) strains of rats (Rattus norvegicus). Behavioural brain research 22 10595417
2008 Assignment of the SLA alleles and reproductive potential of selective breeding Duroc pig lines. Xenotransplantation 21 19152667
1996 The SLA RNA gene of Trypanosoma brucei is organized in a tandem array which encodes several small RNAs. Molecular and biochemical parasitology 21 9027749
2020 Identification of the viral RNA promoter stem loop A (SLA)-binding site on Zika virus polymerase NS5. Scientific reports 20 32764551
2003 Sla1, a Schizosaccharomyces pombe homolog of the human La protein, induces ectopic meiosis when its C terminus is truncated. Eukaryotic cell 20 14665462
2020 Porcine Reproductive and Respiratory Syndrome Virus Promotes SLA-DR-Mediated Antigen Presentation of Nonstructural Proteins To Evoke a Nonneutralizing Antibody Response In Vivo. Journal of virology 19 32796065
2015 Early bone response to machined, sandblasting acid etching (SLA) and novel surface-functionalization (SLAffinity) titanium implants: characterization, biomechanical analysis and histological evaluation in pigs. Journal of biomedical materials research. Part A 19 26418567
2008 Sequence-based characterization of the eight SLA loci in Korean native pigs. International journal of immunogenetics 19 18549392
2002 Expansion of the Knops blood group system and subdivision of Sl(a). Transfusion 19 11896343
1998 The gene for the human Src-like adaptor protein (hSLAP) is located within the 64-kb intron of the thyroglobulin gene. European journal of biochemistry 19 9660183
2021 Evaluation of Cellular Immunity with ASFV Infection by Swine Leukocyte Antigen (SLA)-Peptide Tetramers. Viruses 18 34835070
2016 SLA-PGN-primed dendritic cell-based vaccination induces Th17-mediated protective immunity against experimental visceral leishmaniasis: a crucial role of PKCβ. Pathogens and disease 18 27150838
1988 Influence of SLA haplotype on preimplantation embryonic cell number in miniature pigs. Journal of reproduction and fertility 18 3141620
2017 Cytokines and chemokines measured in dried SLA-stimulated whole blood spots for asymptomatic Leishmania infantum and Leishmania donovani infection. Scientific reports 17 29222521
2017 Specificity Characterization of SLA Class I Molecules Binding to Swine-Origin Viral Cytotoxic T Lymphocyte Epitope Peptides in Vitro. Frontiers in microbiology 17 29326671
2012 Identification of peptides from foot-and-mouth disease virus structural proteins bound by class I swine leukocyte antigen (SLA) alleles, SLA-1*0401 and SLA-2*0401. Animal genetics 17 22984928
2012 Comprehensive and high-resolution typing of swine leukocyte antigen DQA from genomic DNA and determination of 25 new SLA class II haplotypes. Tissue antigens 17 23137324
2009 Functional analyses of Src-like adaptor (SLA), a glucocorticoid-regulated gene in acute lymphoblastic leukemia. Leukemia research 17 19631983
2002 Development of a rapid in vitro protein refolding assay which discriminates between peptide-bound and peptide-free forms of recombinant porcine major histocompatibility class I complex (SLA-I). Veterinary immunology and immunopathology 17 11943330
1989 Genetic and other effects on bacterial phagocytosis and killing by cultured peripheral blood monocytes of SLA-defined miniature pigs. Animal genetics 17 2515776
1982 Transplantation in miniature swine. XII. N-terminal sequences of class I histocompatibility antigens (SLA) and beta 2-microglobulin. Journal of immunology (Baltimore, Md. : 1950) 17 6177778
2023 Osteogenic and anti-inflammatory effects of SLA titanium substrates doped with chitosan-stabilized selenium nanoparticles via a covalent coupling strategy. Colloids and surfaces. B, Biointerfaces 16 36868181
2020 SLA-1 Genetic Diversity in Pigs: Extensive Analysis of Copy Number Variation, Heterozygosity, Expression, and Breed Specificity. Scientific reports 16 31959823
2020 Illumination of PRRSV Cytotoxic T Lymphocyte Epitopes by the Three-Dimensional Structure and Peptidome of Swine Lymphocyte Antigen Class I (SLA-I). Frontiers in immunology 16 31969884
2016 Lymphoproliferative response after stimulation with soluble leishmania antigen (SLA) as a predictor of visceral leishmaniasis (VL) relapse in HIV+ patients. Acta tropica 16 27693332
2010 Simple and comprehensive SLA-DQB1 genotyping using genomic PCR and direct sequencing. Tissue antigens 16 20604896
2004 Sequence and mRNA expression of nonclassical SLA class I genes SLA-7 and SLA-8. Immunogenetics 16 15118849
1991 Marked genetic polymorphism of the swine steroid 21-hydroxylase gene, and its location between the SLA class I and class II regions. Animal genetics 16 1683187
2023 The non-classical major histocompatibility complex II protein SLA-DM is crucial for African swine fever virus replication. Scientific reports 15 37604847
2012 Role of Scd5, a protein phosphatase-1 targeting protein, in phosphoregulation of Sla1 during endocytosis. Journal of cell science 15 22825870
2010 Human SepSecS or SLA/LP: selenocysteine formation and autoimmune hepatitis. Biological chemistry 15 20623998
2004 Truncated Sla1 induces haploid meiosis through the Pat1-Mei2 system in fission yeast. Bioscience, biotechnology, and biochemistry 15 14745200
2015 Improved osseointegration of long-term stored SLA implant by hydrothermal sterilization. Journal of the mechanical behavior of biomedical materials 14 26382972
2011 Evaluation of chemically modified SLA implants (modSLA) biofunctionalized with integrin (RGD)- and heparin (KRSR)-binding peptides. Journal of biomedical materials research. Part A 14 22213622
1997 Antibodies to P450IID6, SLA, PDH-E2 and BCKD-E2 in Japanese patients with chronic hepatitis. Journal of gastroenterology and hepatology 14 9504898
2018 The Sla1 adaptor-clathrin interaction regulates coat formation and progression of endocytosis. Traffic (Copenhagen, Denmark) 13 29542219
2013 Structural mimicry between SLA/LP and Rickettsia surface antigens as a driver of autoimmune hepatitis: insights from an in silico study. Theoretical biology & medical modelling 13 23575112
2015 Swine leukocyte antigen class II genes (SLA-DRA, SLA-DRB1, SLA-DQA, SLA-DQB1) polymorphism and genotyping in Guizhou minipigs. Genetics and molecular research : GMR 12 26634489
2012 Prediction of altered 3'- UTR miRNA-binding sites from RNA-Seq data: the swine leukocyte antigen complex (SLA) as a model region. PloS one 12 23139801
2024 A neural pathway for social modulation of spontaneous locomotor activity (SoMo-SLA) in Drosophila. Proceedings of the National Academy of Sciences of the United States of America 11 38394240
2021 Porcine Epidemic Diarrhea Virus Envelope Protein Blocks SLA-DR Expression in Barrow-Derived Dendritic Cells by Inhibiting Promoters Activation. Frontiers in immunology 11 34858400
2020 Association of Porcine Swine Leukocyte Antigen (SLA) Haplotypes with B- and T-Cell Immune Response to Foot-and-Mouth Disease Virus (FMDV) Peptides. Vaccines 11 32911818
2020 Human Salivary Histatin-1 Promotes Osteogenic Cell Spreading on Both Bio-Inert Substrates and Titanium SLA Surfaces. Frontiers in bioengineering and biotechnology 11 33195147
2016 Enhancement of osseointegration by direct coating of rhBMP-2 on target-ion induced plasma sputtering treated SLA surface for dental application. Journal of biomaterials applications 11 27881639
2005 Anti-tRNP(ser)sec/SLA/LP autoantibodies. Comparative study using in-house ELISA with a recombinant 48.8 kDa protein, immunoblot, and analysis of immunoprecipitated RNAs. Liver international : official journal of the International Association for the Study of the Liver 11 15780067
2005 Novel SLA-DQ alleles and their recombinant molecules in xenogeneic stimulation of human T cells. Transplant immunology 11 15935298
2022 Antimicrobial peptide GL13K immobilized onto SLA-treated titanium by silanization: antibacterial effect against methicillin-resistant Staphylococcus aureus (MRSA). RSC advances 10 35424597
2020 Biocorrosion of pure and SLA titanium surfaces in the presence of Porphyromonas gingivalis and its effects on osteoblast behavior. RSC advances 10 35497867
2000 Influence of glutaraldehyde fixation on the detection of SLA-I and II antigens and calcification tendency in porcine cardiac tissue. Scandinavian cardiovascular journal : SCJ 10 11214013
1995 Chromosomal localization of the mouse Src-like adapter protein (Slap) gene and its putative human homolog SLA. Genomics 10 8825655

Missed literature

Know a paper Affinage missed for SLA? Flag it for the maintainers and the community.

No submissions yet.