Affinage

TMED5

Transmembrane emp24 domain-containing protein 5 · UniProt Q9Y3A6

Length
229 aa
Mass
26.0 kDa
Annotated
2026-06-10
16 papers in source corpus 7 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TMED5 (p24γ2) is a p24-family cargo receptor of the early secretory pathway that mediates selective ER-to-Golgi transport of secretory and GPI-anchored proteins (PMID:24778190, PMID:21118709). Cargo selectivity for GPI-anchored proteins is conferred by its membrane-adjacent α-helical region rather than its luminal GOLD domain, which is required for incorporation of GPI-APs into COPII-coated vesicles (PMID:24778190). The GOLD domain itself adopts a β-sandwich fold and crystallizes as a dimer assisted by a short C-terminal α-helix, consistent with a role in p24 complex assembly (PMID:28066915). Within the p24γ subfamily TMED5 is functionally non-redundant, supporting distinct cargo-processing roles such as the transport, glycosylation, sulfation, and cleavage of POMC compared to p24γ3 (PMID:21118709). Beyond its core trafficking function, TMED5 interacts with WNT7B to activate canonical WNT/β-catenin signaling in cervical cancer cells (PMID:30394198), and it accumulates in lysosomes under APOE4 expression where it drives lysosomal alkalinization and impaired lysosomal function (PMID:41103078, PMID:37873080).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2010 Medium

    Established that p24 proteins within a single subfamily are functionally distinct, addressing whether p24γ2 simply substitutes for related subunits in cargo handling.

    Evidence Melanotrope-specific transgene expression in Xenopus with biochemical analysis of POMC glycosylation, sulfation, and cleavage

    PMID:21118709

    Open questions at the time
    • Mechanistic basis for the distinct roles of p24γ2 vs p24γ3 not defined
    • Direct cargo-binding interface for POMC not mapped
    • Single physiological model and lab
  2. 2014 High

    Identified the membrane-adjacent α-helical region as the determinant of GPI-anchored protein recognition, localizing cargo selectivity to a specific domain rather than the GOLD domain.

    Evidence siRNA knockdown plus chimeric p24γ2/p24γ1 domain-swap rescue with a GPI-AP transport reporter

    PMID:24778190

    Open questions at the time
    • Direct physical contact between the α-helical region and GPI-AP cargo not demonstrated
    • How the α-helix couples cargo to the COPII machinery not resolved
  3. 2017 Medium

    Provided the first structural model of the TMED5 GOLD domain and proposed dimerization as a basis for p24 complex formation.

    Evidence X-ray crystallography of the mouse p24γ2 GOLD domain at 2.8 Å (sulfur SAD)

    PMID:28066915

    Open questions at the time
    • Functional consequence of GOLD dimerization not validated in cells
    • Full-length structure including the cargo-selective α-helical region absent
    • Partner subunit interfaces not structurally defined
  4. 2018 Medium

    Connected TMED5 to oncogenic signaling by showing physical interaction with WNT7B and activation of canonical WNT/β-catenin signaling in cancer cells.

    Evidence Co-immunoprecipitation, western blot, and cell-based pathway readouts in cervical cancer cells

    PMID:30394198

    Open questions at the time
    • Single Co-IP without reciprocal validation
    • Whether the interaction reflects secretory trafficking of WNT7B or a direct signaling role is unclear
    • Interaction not confirmed in independent systems
  5. 2023 Low

    Linked TMED5 to hepatocellular carcinoma cell behavior, implicating it in proliferation, migration, invasion, and apoptosis control.

    Evidence siRNA knockdown with CCK-8 proliferation, flow cytometry, and Transwell assays in HCC cell lines

    PMID:36530030

    Open questions at the time
    • No direct mechanistic validation that TMED5 acts through cell cycle, mTOR, or TGF-β pathways
    • Single lab and phenotypic-only readouts
    • In vivo relevance not tested
  6. 2025 Medium

    Revealed a non-secretory disease-relevant role by showing TMED5 accumulates in lysosomes under APOE4 expression and drives lysosomal alkalinization and dysfunction.

    Evidence LysoIP-mass spectrometry lysosomal proteomics with siRNA/overexpression and lysosomal pH and function assays in neuronal cells

    PMID:37873080 PMID:41103078

    Open questions at the time
    • Mechanism of TMED5 lysosomal mistargeting under APOE4 not defined
    • Molecular cause of alkalinization downstream of TMED5 accumulation unknown
    • Relationship to its secretory-pathway function unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • How TMED5's defined ER-to-Golgi cargo receptor activity mechanistically connects to its reported roles in WNT signaling, cancer cell phenotypes, and APOE4-driven lysosomal dysfunction remains unresolved.
  • No unifying mechanism linking secretory trafficking to signaling and lysosomal roles
  • Direct cargo and partner interfaces largely unmapped at atomic resolution

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0038024 cargo receptor activity 2
Localization
GO:0005764 lysosome 1 GO:0005783 endoplasmic reticulum 1 GO:0005794 Golgi apparatus 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 1 R-HSA-9609507 Protein localization 1
Partners

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 The α-helical region (membrane-adjacent) of p24γ2 (TMED5), but not its GOLD domain, is required for recognition and transport of GPI-anchored proteins (GPI-APs) from the ER to the Golgi. Knockdown of p24γ2 impaired GPI-AP transport, and chimeric constructs between p24γ2 and p24γ1 mapped the functional specificity to the α-helical region, implicating this domain in GPI-AP incorporation into COPII-coated vesicles. siRNA knockdown, chimeric construct rescue assay, GPI-AP transport reporter assay The Journal of biological chemistry High 24778190
2017 The crystal structure of the mouse p24γ2 (TMED5) GOLD domain was determined at 2.8 Å resolution, revealing a β-sandwich fold. The GOLD domain crystallizes as a dimer assisted by a short C-terminal α-helix, suggesting a role for GOLD domain dimerization in p24 complex formation. X-ray crystallography (single anomalous diffraction using intrinsic sulfur atoms) Proteins Medium 28066915
2010 In Xenopus melanotrope cells, p24γ2 (TMED5 ortholog) plays a distinct and non-redundant role in the transport, glycosylation, sulfation, and cleavage of the secretory cargo POMC compared to its subfamily relative p24γ3, demonstrating that p24 proteins from the same subfamily have distinct functions. Melanotrope-specific transgene expression in Xenopus, biochemical analysis of POMC processing (glycosylation, sulfation, cleavage) Biochimie Medium 21118709
2018 TMED5 interacts with WNT7B and activates the canonical WNT-CTNNB1/β-catenin signaling pathway in cervical cancer cells, as established by co-immunoprecipitation. Co-immunoprecipitation (IP), western blot, cell-based functional assays Autophagy Medium 30394198
2025 TMED5 accumulates in lysosomes in APOE4-expressing neuronal cells, and this lysosomal accumulation contributes to lysosomal alkalinization and impaired lysosomal function. Targeting lysosomal TMED5 levels modulated lysosomal function, validating TMED5 as a functional driver of APOE4-associated lysosomal dysfunction. Quantitative lysosomal proteome profiling (LysoIP + mass spectrometry), siRNA knockdown/overexpression with lysosomal pH and function assays Autophagy Medium 37873080 41103078
2023 Silencing of TMED5 in hepatocellular carcinoma cells (SMMC-7721 and Hep3B) suppressed cell proliferation, migration, and invasion, and enhanced apoptosis, implicating TMED5 in regulation of the cell cycle, mTOR signaling, and TGF-β signaling pathways. siRNA knockdown, cell proliferation assay (CCK-8), flow cytometry (apoptosis/cell cycle), Transwell migration/invasion assay Advances in clinical and experimental medicine Low 36530030

Source papers

Stage 0 corpus · 16 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 Mapping of chromosome 1p deletions in myeloma identifies FAM46C at 1p12 and CDKN2C at 1p32.3 as being genes in regions associated with adverse survival. Clinical cancer research : an official journal of the American Association for Cancer Research 153 21994415
2018 GRSF1-mediated MIR-G-1 promotes malignant behavior and nuclear autophagy by directly upregulating TMED5 and LMNB1 in cervical cancer cells. Autophagy 73 30394198
2014 The α-helical region in p24γ2 subunit of p24 protein cargo receptor is pivotal for the recognition and transport of glycosylphosphatidylinositol-anchored proteins. The Journal of biological chemistry 28 24778190
2017 Crystallographic analysis of murine p24γ2 Golgi dynamics domain. Proteins 12 28066915
2022 Exploration of differentially expressed mRNAs and miRNAs for pediatric acute myeloid leukemia. Frontiers in genetics 11 36160019
2021 Identification of a novel circ_0018289/miR-183-5p/TMED5 regulatory network in cervical cancer development. World journal of surgical oncology 10 34404391
2023 Promoting action of long non-coding RNA small nucleolar RNA host gene 4 in ovarian cancer. Acta biochimica Polonica 8 36657061
2022 TP73-AS1 promotes gastric cancer proliferation and invasion by regulation miR-27b-3p/TMED5 axis. Journal of Cancer 8 35281863
2025 Lysosomal proteomics reveals mechanisms of neuronal apoE4-associated lysosomal dysfunction. bioRxiv : the preprint server for biology 7 37873080
2025 Lysosomal proteomics reveals mechanisms of neuronal APOE4-associated lysosomal dysfunction. Autophagy 6 41103078
2014 Mapping of the chromosomal amplification 1p21-22 in bladder cancer. BMC research notes 6 25135188
2010 p24 Proteins from the same subfamily are functionally nonredundant. Biochimie 5 21118709
2023 Silencing of TMED5 inhibits proliferation, migration and invasion, and enhances apoptosis of hepatocellular carcinoma cells. Advances in clinical and experimental medicine : official organ Wroclaw Medical University 4 36530030
2023 SNHG 12 and hsa-miR-140-5P may play an important role in the ceRNA network related to hypertrophic cardiomyopathy. Journal of thoracic disease 2 37065602
2025 Lamb Performance and Meat Quality: The Impact of Chromium in High-Concentrate Diets and Its Molecular Effects on Skeletal Muscle During Finishing Phase. Biological trace element research 1 40011411
2023 [Analyzing the evolution of insect TMED gene and the expression pattern of silkworm TMED gene]. Sheng wu gong cheng xue bao = Chinese journal of biotechnology 1 38147997

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