Affinage

ST7

Suppressor of tumorigenicity 7 protein · UniProt Q9NRC1

Audit flag: wrong gene
Length
585 aa
Mass
67.2 kDa
Annotated
2026-06-10
49 papers in source corpus 8 papers cited in narrative 8 extracted findings
Cross-family judge faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ST7 (LRP12) is a tumor suppressor on chromosome 7q31 whose re-expression abrogates in vivo tumorigenicity of prostate and breast cancer cells without altering in vitro proliferation (PMID:11279520, PMID:16474848). It is a cytoplasmic transmembrane member of the LDLR superfamily; its cytoplasmic domain carries endocytosis and signaling motifs and interacts with RACK1, MIBP, and SARA in yeast two-hybrid assays (PMID:12809483), and the protein localizes to the cytoplasm rather than the nucleus across multiple cancer cell lines (PMID:20238225). ST7 exerts tumor suppression largely by reshaping the tumor microenvironment, predominantly inducing changes in extracellular matrix remodeling genes including SPARC, IGFBP5, and matrix metalloproteinases (PMID:16474848). Mechanistically, ST7 binds YBX1 and blocks its nuclear translocation, repressing MMP14 expression and inhibiting EMT and metastasis (PMID:42025890), and its loss upregulates IQGAP1 to drive proliferation and invasion (PMID:33793053). ST7 expression is controlled at two levels: transcriptionally, PRMT5 associated with hSWI/SNF (BRG1/hBRM) chromatin-remodeling complexes methylates histone H3 at arginine 8 at the ST7 promoter, triggering H3K9 deacetylation and repression (PMID:15485929); and post-translationally, the CRL4DCAF4 ligase complex (driven by c-Myc-induced CUL4A/CUL4B) and the MIB1 E3 ligase target ST7 for proteasomal degradation (PMID:30945288, PMID:33793053).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2001 Medium

    Establishing whether the 7q31 candidate ST7 had genuine tumor-suppressor activity required functional testing; re-expression demonstrated it suppresses tumorigenicity in vivo without affecting cell-intrinsic proliferation, defining a microenvironment-dependent suppressor.

    Evidence ST7 cDNA re-expression in PC3 prostate cancer cells with subcutaneous tumor formation assay in nude mice

    PMID:11279520

    Open questions at the time
    • Molecular mechanism of suppression undefined
    • No identified binding partners or pathway
    • Single tumor model
  2. 2003 Low

    The molecular identity and interaction potential of ST7 were unknown; domain analysis placed it in the LDLR superfamily (LRP12) with a cytoplasmic domain bearing endocytosis and signaling motifs that bind RACK1, MIBP, and SARA, implicating it in endocytosis and signal transduction.

    Evidence Bioinformatic domain analysis and yeast two-hybrid screening

    PMID:12809483

    Open questions at the time
    • Yeast two-hybrid interactions not validated in cells
    • Functional consequence of RACK1/MIBP/SARA binding untested
    • No link to tumor-suppressor phenotype
  3. 2004 High

    How ST7 is silenced in cancer was unresolved; PRMT5 within hSWI/SNF complexes was shown to methylate H3R8 at the ST7 promoter and trigger H3K9 deacetylation, defining an epigenetic repression mechanism.

    Evidence PRMT5 antisense knockdown, microarray, ChIP at the ST7 promoter, and in vitro histone methylation with recombinant PRMT5

    PMID:15485929

    Open questions at the time
    • Upstream signals controlling PRMT5 recruitment to ST7 promoter unknown
    • Whether silencing is reversible in vivo not addressed
  4. 2006 Medium

    The downstream effector program of ST7 suppression was unknown; expression profiling tied suppression to extracellular matrix remodeling, indicating ST7 acts through modification of the tumor microenvironment.

    Evidence ST7 re-expression with SCID xenograft and soft-agar assays plus expression profiling identifying SPARC, IGFBP5, and MMP changes

    PMID:16474848

    Open questions at the time
    • Direct vs indirect regulation of ECM genes unresolved
    • No molecular partner linking ST7 to transcriptional output
  5. 2010 Medium

    The subcellular site of ST7 action and its cell-cycle behavior were uncharacterized; live-cell imaging confirmed cytoplasmic localization with no nuclear translocation, and synchronization linked ST7 (with SERPINE1) to cell-cycle arrest.

    Evidence GFP/YFP/V5-tagged ST7 fluorescence microscopy with cell-cycle synchronization and RT-PCR

    PMID:20238225

    Open questions at the time
    • Mechanism coupling ST7 to cell-cycle arrest unknown
    • Functional significance of SERPINE1 co-regulation unclear
  6. 2019 High

    Post-translational control of ST7 abundance was undefined; the CRL4DCAF4 complex was shown to ubiquitinate ST7 for degradation, with c-Myc activating CUL4A/CUL4B to lower ST7 in colitis-associated cancer.

    Evidence In vitro and in vivo ubiquitination assays, co-IP, promoter ChIP, knockdown/overexpression, and xenograft model

    PMID:30945288

    Open questions at the time
    • Degron on ST7 recognized by DCAF4 not mapped
    • Generality beyond colitis-associated cancer untested
  7. 2021 Medium

    A second degradation route and a proliferation/invasion effector were unknown; MIB1 was shown to degrade ST7, and ST7 loss derepressed IQGAP1, defining a MIB1/ST7/IQGAP1 axis in pancreatic cancer.

    Evidence Co-IP, ubiquitination assay, knockdown/overexpression, proliferation/invasion assays, and xenograft model

    PMID:33793053

    Open questions at the time
    • Mechanism of ST7-mediated IQGAP1 suppression not resolved
    • Relative contribution of MIB1 vs CRL4DCAF4 across tissues unknown
  8. 2026 Medium

    How cytoplasmic ST7 controls a transcriptional metastatic program was unresolved; ST7 was shown to bind YBX1 and block its nuclear entry, repressing MMP14 and EMT, providing a direct molecular link between ST7 and ECM/EMT output.

    Evidence Co-IP of ST7–YBX1, nuclear translocation assays, EMT assays, and tail-vein lung metastasis mouse model

    PMID:42025890

    Open questions at the time
    • Structural basis of ST7–YBX1 binding unknown
    • Whether YBX1 sequestration explains the broader ECM program of [#3] untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • How ST7's LDLR-superfamily receptor architecture and putative endocytic/signaling partners (RACK1, MIBP, SARA) integrate with its cytoplasmic YBX1/IQGAP1 effector functions remains unresolved.
  • No unifying mechanism linking receptor domain to tumor-suppressor signaling
  • Endocytic role suggested by domain analysis never functionally tested

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 2
Localization
GO:0005829 cytosol 1 GO:0005886 plasma membrane 1
Pathway
R-HSA-1643685 Disease 2 R-HSA-1474244 Extracellular matrix organization 1

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2001 Introduction of ST7 cDNA into the prostate-cancer-derived cell line PC3 abrogated in vivo tumorigenicity in nude mice without affecting in vitro proliferation, establishing ST7 as a functional tumor suppressor gene on chromosome 7q31. cDNA re-expression in PC3 cells, subcutaneous tumor formation assay in nude mice Nature genetics Medium 11279520
2003 ST7 is a member of the low-density lipoprotein receptor (LDLR) superfamily (an LRP, now called LRP12); its cytoplasmic domain contains endocytosis and signal transduction motifs and directly interacts with RACK1, MIBP, and SARA as identified by yeast two-hybrid analysis, suggesting roles in endocytosis and signal transduction. Bioinformatic domain analysis, yeast two-hybrid system Biochemistry Low 12809483
2004 PRMT5, associated with endogenous hSWI/SNF (BRG1 and hBRM) chromatin-remodeling complexes, methylates histone H3 at arginine 8 (H3R8) at the ST7 promoter, leading to H3K9 deacetylation and transcriptional repression of ST7. PRMT5 antisense knockdown cell line, microarray, ChIP, in vitro histone methylation assay with recombinant PRMT5, overexpression cell line Molecular and cellular biology High 15485929
2006 Re-expression of ST7 in PC3 prostate cancer cells suppressed subcutaneous tumor growth in SCID mice and suppressed anchorage-independent colony formation in MDA-MB-231 breast cancer cells; expression profiling revealed ST7 predominantly induces changes in extracellular matrix remodeling genes including SPARC, IGFBP5, and several matrix metalloproteinases, suggesting ST7 mediates tumor suppression through modification of the tumor microenvironment. ST7 cDNA re-expression, SCID mouse xenograft assay, soft-agar colony formation assay, expression profiling/microarray Oncogene Medium 16474848
2010 ST7 protein localizes to the cytoplasm (not the nucleus) in HCT-116, MCF-7, and PC-3 cancer cell lines, and no translocation to the nucleus was observed under any assayed conditions; endogenous ST7 and SERPINE1 are overexpressed when cells are arrested in the cell cycle and diminish upon re-entry into cell division. GFP/YFP/V5-tagged ST7 expression vectors, fluorescence microscopy, cell cycle synchronization, RT-PCR Journal of cancer research and clinical oncology Medium 20238225
2019 The CRL4DCAF4 E3 ubiquitin ligase complex (comprising CUL4A or CUL4B, DDB1, and DCAF4) specifically directs proteasomal degradation of ST7; c-Myc transcriptionally activates CUL4A and CUL4B by binding a conserved CACGTG site in their promoters, thereby increasing CRL4DCAF4 activity and reducing ST7 protein levels in colitis-associated cancer. In vitro and in vivo ubiquitination assays, co-immunoprecipitation, promoter binding/ChIP, siRNA knockdown, overexpression, xenograft mouse model The Journal of pathology High 30945288
2021 MIB1 (mind bomb 1) E3 ubiquitin ligase targets ST7 for proteasomal degradation; loss of ST7 results in upregulation of IQGAP1, promoting pancreatic cancer cell proliferation and invasion, defining a MIB1/ST7/IQGAP1 signaling axis. Co-immunoprecipitation, ubiquitination assay, siRNA knockdown, overexpression, in vitro proliferation/invasion assays, xenograft mouse model Molecular oncology Medium 33793053
2026 ST7 suppresses metastasis in non-small cell lung cancer by binding Y-box binding protein 1 (YBX1) and blocking its nuclear translocation, thereby suppressing MMP14 expression and inhibiting EMT; ST7 silencing enhanced EMT and metastatic progression in vitro and in a tail-vein lung metastasis mouse model. Co-immunoprecipitation (ST7–YBX1 interaction), nuclear translocation assays, siRNA knockdown, overexpression, in vitro EMT assays, in vivo tail-vein metastasis model Cellular signalling Medium 42025890

Source papers

Stage 0 corpus · 49 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2004 Human SWI/SNF-associated PRMT5 methylates histone H3 arginine 8 and negatively regulates expression of ST7 and NM23 tumor suppressor genes. Molecular and cellular biology 500 15485929
2001 Mutational and functional analyses reveal that ST7 is a highly conserved tumor-suppressor gene on human chromosome 7q31. Nature genetics 77 11279520
2021 p53-targeted lncRNA ST7-AS1 acts as a tumour suppressor by interacting with PTBP1 to suppress the Wnt/β-catenin signalling pathway in glioma. Cancer letters 49 33476649
2002 The RAY1/ST7 tumor-suppressor locus on chromosome 7q31 represents a complex multi-transcript system. Genomics 38 12213198
2019 Inflammation-dependent overexpression of c-Myc enhances CRL4DCAF4 E3 ligase activity and promotes ubiquitination of ST7 in colitis-associated cancer. The Journal of pathology 37 30945288
2022 CAF-derived midkine promotes EMT and cisplatin resistance by upregulating lncRNA ST7-AS1 in gastric cancer. Molecular and cellular biochemistry 36 35588343
2022 Infection with pathogenic Blastocystis ST7 is associated with decreased bacterial diversity and altered gut microbiome profiles in diarrheal patients. Parasites & vectors 36 36064620
2003 ST7 is a novel low-density lipoprotein receptor-related protein (LRP) with a cytoplasmic tail that interacts with proteins related to signal transduction pathways. Biochemistry 36 12809483
2002 Molecular cloning and characterization of ST7R (ST7-like, ST7L) on human chromosome 1p13, a novel gene homologous to tumor suppressor gene ST7 on human chromosome 7q31. International journal of oncology 34 12012006
2019 The long noncoding RNA ST7-AS1 promotes laryngeal squamous cell carcinoma by stabilizing CARM1. Biochemical and biophysical research communications 32 30853182
2016 Molecular epidemiology of coagulase-negative bloodstream isolates: detection of Staphylococcus epidermidis ST2, ST7 and linezolid-resistant ST23. The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases 32 27393769
2021 MIB1 upregulates IQGAP1 and promotes pancreatic cancer progression by inducing ST7 degradation. Molecular oncology 25 33793053
2023 ST7 Becomes One of the Most Common Staphylococcus aureus Clones After the COVID-19 Epidemic in the City of Wuhan, China. Infection and drug resistance 21 36818805
2006 ST7-mediated suppression of tumorigenicity of prostate cancer cells is characterized by remodeling of the extracellular matrix. Oncogene 20 16474848
2020 LncRNA ST7-AS1, by regulating miR-181b-5p/KPNA4 axis, promotes the malignancy of lung adenocarcinoma. Cancer cell international 18 33327962
2015 Genomic comparison between pathogenic Streptococcus agalactiae isolated from Nile tilapia in Thailand and fish-derived ST7 strains. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 18 26455417
2021 LncRNA ST7-AS1 is a Potential Novel Biomarker and Correlated With Immune Infiltrates for Breast Cancer. Frontiers in molecular biosciences 17 33912584
2001 Mutation of the ST7 tumor suppressor gene on 7q31.1 is rare in breast, ovarian and colorectal cancers. Nature genetics 17 11726923
2014 The novel helicase helG (DHX30) is expressed during gastrulation in mice and has a structure similar to a human DExH box helicase. Stem cells and development 16 25219788
2001 Absence of ST7 mutations in tumor-derived cell lines and tumors. Nature genetics 15 11726924
2023 A food poisoning caused by ST7 Staphylococcal aureus harboring sea gene in Hainan province, China. Frontiers in microbiology 13 37007521
2008 Identification and characterization of two novel cytosolic sulfotransferases, SULT1 ST7 and SULT1 ST8, from zebrafish. Aquatic toxicology (Amsterdam, Netherlands) 13 18632167
2003 An LOH and mutational investigation of the ST7 gene locus in human esophageal carcinoma. Oncogene 12 12545169
2002 Absence of ST7 gene alterations in human cancer. Clinical cancer research : an official journal of the American Association for Cancer Research 12 12231539
2002 Expression of ST7R (ST7-like, ST7L) in normal tissues and cancer. International journal of oncology 11 12063568
2020 Long Noncoding RNA ST7-AS1 Upregulates TRPM7 Expression by Sponging microRNA-543 to Promote Cervical Cancer Progression. OncoTargets and therapy 10 32801754
2010 Localization and characterization of ST7 in cancer. Journal of cancer research and clinical oncology 10 20238225
2003 Somatic mutation analysis of p53 and ST7 tumor suppressor genes in gastric carcinoma by DHPLC. World journal of gastroenterology 9 14669308
2019 Knockdown of ST7-AS1 inhibits migration, invasion, cell cycle progression and induces apoptosis of gastric cancer. Oncology letters 7 31897194
2002 Lack of mutations within ST7 gene in tumour-derived cell lines and primary epithelial tumours. British journal of cancer 7 12107844
2023 Genetic, Functional, and Immunogenic Analyses of the O-Linked Protein Glycosylation System in Neisseria meningitidis Serogroup A ST-7 Isolates. Journal of bacteriology 6 36852982
2021 Manganese Stress Adaptation Mechanisms of Bacillus safensis Strain ST7 From Mine Soil. Frontiers in microbiology 5 34899642
2022 Genomic Characterization of Livestock-Associated Methicillin-Resistant Staphylococcus aureus ST7 Isolates from a Case of Human Bacteremia in China. Infection and drug resistance 4 36544989
2021 IncN1 ST7 Epidemic Plasmid Carrying blaIMP-4 in One ST85-Type Klebsiella oxytoca Clinical Isolate with Porin Deficiency. Infection and drug resistance 4 34566416
2002 Molecular cloning and characterization of mouse St7r (St7-like, St7l). International journal of molecular medicine 3 12060862
2022 Overexpression of ST7-AS1 Enhances Apoptosis and Inhibits Proliferation of Papillary Thyroid Carcinoma Cells Via microRNA-181b-5p-Dependent Inhibition Tripartite Motif Containing 3. Molecular biotechnology 2 36030355
2014 Prokaryotic expression and antimicrobial mechanism of XPF-St7-derived α-helical peptides. Journal of peptide science : an official publication of the European Peptide Society 2 25421112
2004 Chromosome 7q31 allelic imbalance and somatic mutations of RAY1/ST7 gene in colorectal cancer. Cancer letters 2 14670621
2003 Mutations in the ST7/RAY1/HELG locus rarely occur in primary colorectal, gastric, and hepatocellular carcinomas. British journal of cancer 2 12799635
2026 Genomic analysis of a clinical Streptococcus suis ST1 isolate from CSF reveals antimicrobial resistance, virulence, and an evolutionary link to ST7. Scientific reports 0 41760777
2026 ST7 binds YBX1 to suppress MMP14 expression and inhibit metastasis in non-small cell lung cancer. Cellular signalling 0 42025890
2026 Emergence, identification, and characterization of a novel Streptococcus agalactiae CPS type Ia ST7 strain (Ia-2021) causing large scale mortalities in tilapia aquaculture. Scientific reports 0 42106541
2026 Epidemiological investigation of Blastocystis in dairy cattle in Xinjiang, China: Unusual detection of avian-adapted subtype ST7. Microbial pathogenesis 0 42176962
2026 Streptococcus agalactiae Serotype Ia ST7 CC1 in Farmed Nile Tilapia in Latin America: Age-Dependent Disease Expression and Antimicrobial Susceptibility of an Emerging Clonal Lineage. Pathogens (Basel, Switzerland) 0 42198670
2025 A small RNA from Streptococcus suis epidemic ST7 strain promotes bacterial survival in host blood and brain by enhancing oxidative stress resistance. Virulence 0 40237541
2025 Mechanism of LncRNA ST7-AS2/RBM22/SOX2 axis regulating vasculogenic mimicry of glioma. Cellular signalling 0 41317933
2024 Research on Correlations of lncRNA ST7-AS1 with Progression and Therapeutic Targets of Esophageal Cancer. The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology 0 39696960
2023 Long Noncoding RNA ST7-AS1 Upregulates TRPM7 Expression by Sponging microRNA-543 to Promote Cervical Cancer Progression [Retraction]. OncoTargets and therapy 0 37469554
2003 Mutational analysis of the ST7 gene in human myeloid tumor cell lines. Oncology reports 0 14534688

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