Affinage

RPRM

Protein reprimo · UniProt Q9NS64

Length
109 aa
Mass
11.8 kDa
Annotated
2026-04-28
43 papers in source corpus 10 papers cited in narrative 11 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RPRM (Reprimo) is a p53-induced tumor suppressor that operates through both cell-autonomous and non-cell-autonomous mechanisms to control cell cycle progression, apoptosis, DNA damage responses, and cell migration. In its cell-autonomous role, RPRM localizes to the cytoplasm and induces G2 arrest by inhibiting Cdc2 kinase activity and blocking nuclear translocation of cyclin B1 (PMID:10930422); upon irradiation, CDK4/6 phosphorylates RPRM at Ser98, enabling IPO11-dependent nuclear import where RPRM binds ATM and promotes its proteasomal degradation, thereby modulating DNA repair (PMID:36185355). RPRM also binds CREB and promotes its degradation after irradiation, reducing Nrf2/SCD1 signaling and triggering neuronal ferroptosis (PMID:38272326). In its non-cell-autonomous role, RPRM is secreted and engages protocadherin family receptors (FAT1, FAT4, CELSR1–3) on neighboring cells to activate the Hippo-YAP/TAZ-p73 extrinsic apoptosis pathway (PMID:39913207).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2000 High

    The discovery that RPRM is a p53 target gene that arrests cells at G2 by inhibiting Cdc2 activity and blocking cyclin B1 nuclear translocation established RPRM as a downstream effector of p53 in cell cycle control.

    Evidence Ectopic expression with cell cycle analysis, Cdc2 kinase assay, and subcellular fractionation in human cell lines

    PMID:10930422

    Open questions at the time
    • Endogenous RPRM loss-of-function not tested
    • Direct binding to Cdc2/cyclin B1 not demonstrated
    • Mechanism of Cdc2 inhibition (direct vs. indirect) unresolved
  2. 2009 High

    Identification of a tripartite ERα–HDAC7–FoxA1 complex that represses RPRM transcription upon estrogen signaling revealed an epigenetic mechanism for silencing this tumor suppressor in hormone-responsive contexts.

    Evidence ChIP, co-immunoprecipitation, siRNA knockdown, and HDAC7 deacetylase-dead mutant in breast cancer cells

    PMID:19917725

    Open questions at the time
    • Whether estrogen-mediated RPRM silencing contributes to breast tumorigenesis in vivo
    • Role of HDAC7 catalytic-independent repression mechanism unclear
  3. 2012 Medium

    Demonstration that RPRM protein is constitutively degraded via ubiquitin-proteasome pathway and stabilized by stress, coupled with evidence that RPRM overexpression suppresses proliferation and promotes apoptosis in pituitary cells, established post-translational control of RPRM abundance and broadened its tumor suppressor function beyond G2 arrest.

    Evidence Proteasome inhibitor treatment, ubiquitination assay, caspase-3 cleavage, and clonogenic assay in pituitary tumor cell lines

    PMID:22562171

    Open questions at the time
    • E3 ubiquitin ligase for RPRM not identified
    • Whether apoptosis induction requires the same pathway as G2 arrest unresolved
  4. 2016 Medium

    Finding that RPRM overexpression specifically suppresses cell migration and invasion without affecting viability or cell cycle in breast cancer cells expanded RPRM's functional repertoire to motility regulation.

    Evidence Transwell migration/invasion assays, wound healing assay, and flow cytometry in MDA-MB-231 cells

    PMID:26796959

    Open questions at the time
    • Molecular targets mediating anti-migratory effect not identified
    • No in vivo metastasis model tested
  5. 2022 High

    Three independent studies in 2022 revealed: (1) RPRM undergoes CDK4/6-dependent Ser98 phosphorylation and IPO11-mediated nuclear translocation to promote ATM degradation after irradiation; (2) RPRM deletion protects hematopoietic stem cells from radiation via EGFR–STAT3–DNA-PKcs upregulation; and (3) LINC00467 recruits DNMT1 to methylate the RPRM promoter in gastric cancer. These collectively established RPRM as a central modulator of DNA damage responses and clarified epigenetic silencing mechanisms.

    Evidence Co-IP, phospho-site mutagenesis, IPO11 knockdown, proteasome inhibitors, RPRM KO mouse irradiation model, RIP/ChIP for DNMT1 at RPRM promoter

    PMID:35549646 PMID:36041213 PMID:36185355

    Open questions at the time
    • Crystal structure of RPRM–ATM interaction unknown
    • Whether CDK4/6 phosphorylation regulates functions beyond nuclear import unclear
    • LINC00467–DNMT1 mechanism validated in a single cancer type
  6. 2024 High

    Identification of CREB as a direct RPRM-binding partner whose degradation after irradiation suppresses Nrf2/SCD1 and triggers neuronal ferroptosis linked RPRM to a non-apoptotic cell death pathway in the nervous system.

    Evidence Co-immunoprecipitation of RPRM–CREB, RPRM KO mouse, lipid peroxidation assay, primary neuron culture

    PMID:38272326

    Open questions at the time
    • Whether RPRM-CREB interaction is direct or scaffolded not established
    • Ferroptosis relevance beyond radiation-induced injury untested
  7. 2025 High

    Discovery that RPRM is secreted and engages protocadherin receptors (FAT1, FAT4, CELSR1–3) to activate the Hippo-YAP/TAZ-p73 apoptosis axis fundamentally recast RPRM as a non-cell-autonomous tumor suppressor ligand, defining a complete p53–Reprimo–protocadherin–Hippo–p73 extrinsic signaling pathway.

    Evidence Secretion assay, receptor identification by pulldown, epistasis analysis, YAP/TAZ reporter, in vivo tumor models

    PMID:39913207

    Open questions at the time
    • Structural basis of RPRM–protocadherin binding unknown
    • Relative contribution of cell-autonomous vs. secreted RPRM to tumor suppression in vivo unresolved
  8. 2025 Medium

    Conditional ERα knockout in Rprm-lineage hypothalamic neurons revealed a sex-specific role for these cells in thermoregulation, extending RPRM biology to neuroendocrine physiology.

    Evidence ReprimoCre conditional knockout mouse, core/BAT/tail temperature measurements, cell ablation in mediobasal hypothalamus

    PMID:41315012

    Open questions at the time
    • Whether RPRM protein itself has a functional role in thermoregulation or merely marks a neuronal population is unresolved
    • Downstream effectors of ERα in Rprm neurons not identified

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include: the identity of the E3 ligase(s) mediating RPRM ubiquitin-proteasomal turnover; the structural basis of RPRM interactions with ATM, CREB, and protocadherin receptors; and whether the cell-autonomous (G2 arrest, ATM degradation) and non-cell-autonomous (secreted ligand) functions are independently regulated or coordinated in vivo.
  • E3 ligase for RPRM degradation unidentified
  • No structural data for RPRM or its complexes
  • In vivo partitioning between intracellular and secreted RPRM functions unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 3 GO:0048018 receptor ligand activity 1
Localization
GO:0005829 cytosol 2 GO:0005576 extracellular region 1 GO:0005634 nucleus 1
Pathway
R-HSA-5357801 Programmed Cell Death 3 R-HSA-73894 DNA Repair 2 R-HSA-162582 Signal Transduction 1 R-HSA-1640170 Cell Cycle 1

Evidence

Reading pass · 11 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2000 RPRM (Reprimo) is a p53-dependent gene that, when ectopically expressed, localizes to the cytoplasm and induces G2 cell cycle arrest by inhibiting Cdc2 kinase activity and blocking nuclear translocation of cyclin B1, placing RPRM in the Cdc2·cyclin B1 regulation pathway downstream of p53. Ectopic expression, cell cycle analysis, Cdc2 activity assay, subcellular fractionation/localization The Journal of biological chemistry High 10930422
2009 Estrogen repression of RPRM requires a tripartite interaction among estrogen receptor α (ERα), histone deacetylase 7 (HDAC7), and the chromatin pioneer factor FoxA1. HDAC7 binds ERα and represses its transcriptional activity (independently of HDAC7 deacetylase activity), while FoxA1 is recruited to the RPRM promoter (characterized by H3K4me1/me2 marks). Estrogen treatment causes decreases in H3K4me1/me2 and release of RNA Pol II from the proximal RPRM promoter. ChIP, co-immunoprecipitation, siRNA knockdown, promoter reporter assays, HDAC7 deacetylase-dead mutant Molecular and cellular biology High 19917725
2012 In pituitary cells, RPRM protein is rapidly degraded via ubiquitination and proteasomal targeting under normal conditions, but cellular stress (growth factor withdrawal) stabilizes RPRM protein levels, indicating post-translational regulation of RPRM abundance. Stable overexpression, proteasome inhibitor treatment, ubiquitination assay, growth factor withdrawal Endocrinology Medium 22562171
2012 RPRM overexpression in pituitary tumor cell lines (LβT2 and GH3) decreases cell proliferation and increases apoptosis in response to growth factor deprivation (assessed by caspase-3 cleavage and nuclear condensation), and suppresses colony formation, supporting a tumor suppressor role that is independent of G2/M cell cycle effects in this context. Stable overexpression, proliferation assay, caspase-3 cleavage, clonogenic assay, nuclear condensation Endocrinology Medium 22562171
2016 RPRM overexpression in MDA-MB-231 breast cancer cells decreases cell migration, wound healing, and invasion in vitro without altering cell viability, apoptosis (phosphatidylserine translocation), or G2/M cell cycle transition, demonstrating a specific role for RPRM in regulating cell migration and invasion. Ectopic overexpression, transwell migration/invasion assay, wound healing assay, flow cytometry Biological research Medium 26796959
2022 RPRM translocates from the cytoplasm to the nucleus after X-irradiation, interacts with ATM, and promotes ATM nuclear export and proteasomal degradation, thereby negatively regulating ATM protein levels and impairing DNA repair. RPRM nuclear translocation requires phosphorylation at serine 98 by CDK4/6 and is dependent on Importin-11 (IPO11). Co-immunoprecipitation, subcellular fractionation, phosphorylation site mutagenesis, siRNA knockdown of CDK4/6 and IPO11, proteasome inhibitor experiments, in vitro and in vivo irradiation models iScience High 36185355
2022 RPRM deletion in mice preserves hematopoietic stem cell (HSC) regeneration after ionizing radiation by increasing EGFR expression and phosphorylation in HSCs, which activates STAT3 and DNA-PKcs to promote DNA repair and HSC proliferation. RPRM knockout mouse model, flow cytometry, EGFR/STAT3/DNA-PKcs pathway analysis, irradiation model Cell biology international Medium 36041213
2024 RPRM binds to CREB and promotes its degradation after ionizing radiation, reducing CREB protein levels and thereby downregulating Nrf2 and SCD1, which leads to neuronal ferroptosis via iron accumulation and lipid peroxidation. RPRM deletion restores CREB-Nrf2/SCD1 signaling and protects neurons against radiation-induced ferroptosis. Co-immunoprecipitation (RPRM-CREB interaction), RPRM knockout mouse model, western blot, lipid peroxidation assay, mitochondrial morphology EM, GPX4/SCD1/Nrf2 measurements, primary neuron culture Free radical biology & medicine High 38272326
2025 Reprimo protein is secreted extracellularly and extrinsically induces apoptosis in recipient cells. FAT1, FAT4, CELSR1, CELSR2, and CELSR3 (protocadherin family members) were identified as cell-surface receptors for secreted Reprimo. Reprimo acts upstream of the Hippo-YAP/TAZ-p73 axis to transactivate proapoptotic genes, defining a p53-Reprimo-protocadherin-Hippo-YAP/TAZ-p73 extrinsic apoptosis pathway. Secretion assay, receptor identification (binding/pulldown), co-immunoprecipitation, epistasis analysis, YAP/TAZ reporter assay, in vivo tumor suppression models Proceedings of the National Academy of Sciences of the United States of America High 39913207
2022 LINC00467 promotes methylation and silencing of the RPRM promoter in gastric cancer cells by recruiting DNA methyltransferase 1 (DNMT1) to the RPRM promoter region. RNA immunoprecipitation, ChIP for DNMT1 at RPRM promoter, bisulfite sequencing, LINC00467 knockdown/overexpression Bioengineered Medium 35549646
2025 ERα signaling in Rprm-lineage cells in the mediobasal hypothalamus regulates thermoregulation in female mice; selective knockout of ERα in Rprm-expressing cells (RERKO) alters core temperature, brown adipose tissue temperature, and tail temperature in a sex-specific manner, mediated by the nervous system rather than adipose tissue directly. Conditional knockout (ReprimoCre mouse), in vivo temperature measurement, BAT mass quantification, cell ablation in mediobasal hypothalamus Endocrinology Medium 41315012

Source papers

Stage 0 corpus · 43 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2000 Reprimo, a new candidate mediator of the p53-mediated cell cycle arrest at the G2 phase. The Journal of biological chemistry 166 10930422
2008 Reprimo as a potential biomarker for early detection in gastric cancer. Clinical cancer research : an official journal of the American Association for Cancer Research 107 18829507
2009 Histone deacetylase 7 and FoxA1 in estrogen-mediated repression of RPRM. Molecular and cellular biology 68 19917725
2005 Aberrant methylation of Reprimo in human malignancies. International journal of cancer 58 15700311
2012 Reprimo (RPRM) is a novel tumor suppressor in pituitary tumors and regulates survival, proliferation, and tumorigenicity. Endocrinology 42 22562171
2006 Reprimo methylation is a potential biomarker of Barrett's-Associated esophageal neoplastic progression. Clinical cancer research : an official journal of the American Association for Cancer Research 41 17121882
2013 DNA damage-inducible gene, reprimo functions as a tumor suppressor and is suppressed by promoter methylation in gastric cancer. Molecular cancer research : MCR 39 23982217
2015 Loss of Expression of Reprimo, a p53-induced Cell Cycle Arrest Gene, Correlates with Invasive Stage of Tumor Progression and p73 Expression in Gastric Cancer. PloS one 31 25954972
2005 Aberrant methylation of Reprimo in lung cancer. Lung cancer (Amsterdam, Netherlands) 26 15713514
2010 Loss of Reprimo and S100A2 expression in human gastric adenocarcinoma. Diagnostic cytopathology 24 20949468
2019 Molecular chaperone HspB2 inhibited pancreatic cancer cell proliferation via activating p53 downstream gene RPRM, BAI1, and TSAP6. Journal of cellular biochemistry 23 31692031
2015 Implication of Reprimo and hMLH1 gene methylation in early diagnosis of gastric carcinoma. International journal of clinical and experimental pathology 23 26823831
2020 The Reprimo-Like Gene Is an Epigenetic-Mediated Tumor Suppressor and a Candidate Biomarker for the Non-Invasive Detection of Gastric Cancer. International journal of molecular sciences 18 33322837
2016 Evolutionary history of the reprimo tumor suppressor gene family in vertebrates with a description of a new reprimo gene lineage. Gene 18 27432065
2020 Methylation Analysis of P16, RASSF1A, RPRM, and RUNX3 in Circulating Cell-Free DNA for Detection of Gastric Cancer: A Validation Study. Avicenna journal of medical biotechnology 17 32431794
2016 Reprimo as a modulator of cell migration and invasion in the MDA-MB-231 breast cancer cell line. Biological research 17 26796959
2018 The Reprimo Gene Family: A Novel Gene Lineage in Gastric Cancer with Tumor Suppressive Properties. International journal of molecular sciences 15 29941787
2016 Methylation-Sensitive Melt Curve Analysis of the Reprimo Gene Methylation in Gastric Cancer. PloS one 15 27992600
2024 Reprimo (RPRM) mediates neuronal ferroptosis via CREB-Nrf2/SCD1 pathways in radiation-induced brain injury. Free radical biology & medicine 13 38272326
2017 Reprimo tissue-specific expression pattern is conserved between zebrafish and human. PloS one 13 28562620
2008 Reprimo 824 G>C and p53R2 4696 C>G single nucleotide polymorphisms and colorectal cancer: a case-control disease association study. International journal of colorectal disease 12 18197409
2025 Extrinsic induction of apoptosis and tumor suppression via the p53-Reprimo-Hippo-YAP/TAZ-p73 pathway. Proceedings of the National Academy of Sciences of the United States of America 11 39913207
2017 Reprimo, a Potential p53-Dependent Tumor Suppressor Gene, Is Frequently Hypermethylated in Estrogen Receptor α-Positive Breast Cancer. International journal of molecular sciences 10 28809778
2019 Gold@Silica Nanoparticles Functionalized with Oligonucleotides: A Prominent Tool for the Detection of the Methylated Reprimo Gene in Gastric Cancer by Dynamic Light Scattering. Nanomaterials (Basel, Switzerland) 9 31540371
2022 RPRM deletion preserves hematopoietic regeneration by promoting EGFR-dependent DNA repair and hematopoietic stem cell proliferation post ionizing radiation. Cell biology international 8 36041213
2022 Downregulated Reprimo by LINC00467 participates in the growth and metastasis of gastric cancer. Bioengineered 7 35549646
2018 Effect of Reprimo Down-regulation on Malignant Transformation of Intraductal Papillary Mucinous Neoplasm. Pancreas 7 29401170
2023 Reprimo (RPRM) as a Potential Preventive and Therapeutic Target for Radiation-Induced Brain Injury via Multiple Mechanisms. International journal of molecular sciences 6 38069378
2015 tp53-dependent G2 arrest mediator candidate gene, Reprimo, is down-regulated by promoter hypermethylation in pediatric acute myeloid leukemia. Leukemia & lymphoma 6 25629980
2023 Value of Methylation Status of RPRM, SDC2, and TCF4 Genes in Plasma for Gastric Adenocarcinoma Screening. International journal of general medicine 5 36855658
2019 The Reprimo gene family member, reprimo-like (rprml), is required for blood development in embryonic zebrafish. Scientific reports 5 31073223
2022 RPRM negatively regulates ATM levels through its nuclear translocation on irradiation mediated by CDK4/6 and IPO11. iScience 4 36185355
2018 Expression of RPRM/rprm in the Olfactory System of Embryonic Zebrafish (Danio rerio). Frontiers in neuroanatomy 4 29636669
2018 Studying the expression rate and methylation of Reprimo gene in the blood of patients suffering from gastric cancer. European journal of translational myology 4 29991989
2025 Methylated Reprimo Cell-Free DNA as a Non-Invasive Biomarker for Gastric Cancer. International journal of molecular sciences 3 40244164
2019 Prediction of onset of remnant gastric cancer by promoter DNA methylation of CDO1/HOPX/Reprimo/E-cadherin. Oncotarget 3 31069006
2012 Epstein-Barr virus-encoded latent membrane protein-1 upregulates 14-3-3σ and Reprimo to confer G(2)/M phase cell cycle arrest. Comptes rendus biologies 2 23312294
2025 SFRP2 and RPRM as methylation based serum biomarkers for the detection of gastric cancer. Discover oncology 1 40849852
2025 Sex-Specific Thermoregulatory Effects of Estrogen Signaling in Reprimo Lineage Cells. Endocrinology 1 41315012
2002 Identification of polymorphisms in the human Reprimo gene using public EST data. Teratogenesis, carcinogenesis, and mutagenesis 1 12395409
2025 Sex-specific thermoregulatory effects of estrogen signaling in Reprimo lineage cells. bioRxiv : the preprint server for biology 0 39677630
2025 Reprimo (RPRM): A Tumor Suppressor That Induces Extrinsic Apoptosis via YAP Signaling. Cancer science 0 41036848
2020 Author Correction: The Reprimo gene family member, reprimo-like (rprml), is required for blood development in embryonic zebrafish. Scientific reports 0 32111873