Affinage

IPO11

Importin-11 · UniProt Q9UI26

Length
975 aa
Mass
112.5 kDa
Annotated
2026-06-10
8 papers in source corpus 2 papers cited in narrative 2 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

IPO11 (Importin-11) functions as a nuclear import receptor that delivers specific cargo proteins into the nucleus to control transcriptional and DNA-damage signaling programs (PMID:31881079). In APC-mutant colorectal cancer cells with high Wnt activity, IPO11 is required for nuclear import of β-catenin; its loss reduces nuclear β-catenin and dampens β-catenin target gene activation, sustaining the proliferative Wnt transcriptional program (PMID:31881079). IPO11 also mediates the irradiation-induced nuclear translocation of RPRM, which depends on CDK4/6 phosphorylation of RPRM at serine 98; once nuclear, RPRM binds ATM and promotes its nuclear export and proteasomal degradation, thereby downregulating ATM and impairing DNA repair (PMID:36185355). Beyond these two cargo relationships, no further mechanistic detail on IPO11 has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2020 High

    Established IPO11 as the nuclear import factor required to sustain β-catenin-driven Wnt transcription in APC-mutant cancer, identifying a previously unknown node controlling oncogenic Wnt signaling.

    Evidence Genome-wide CRISPR screen with IPO11 knockout, nuclear fractionation/western blot for β-catenin, target gene expression, and patient-derived CRC organoid proliferation assays

    PMID:31881079

    Open questions at the time
    • No direct biochemical demonstration that IPO11 binds β-catenin or a recognition motif
    • Cargo specificity and breadth beyond β-catenin not defined
    • No structural model of the IPO11–cargo interaction
  2. 2022 Medium

    Showed IPO11 imports phospho-RPRM into the nucleus to trigger ATM downregulation, linking IPO11 cargo transport to the DNA damage response and radiosensitivity.

    Evidence IPO11 knockdown/knockout, reciprocal RPRM–ATM co-immunoprecipitation, nuclear fractionation, S98 phosphosite mutagenesis, CDK4/6 inhibitor treatment, and in vitro/in vivo radiosensitivity assays

    PMID:36185355

    Open questions at the time
    • Not independently replicated outside a single lab
    • Direct IPO11–RPRM binding not biochemically reconstituted
    • Mechanism by which IPO11 recognizes phospho-S98 RPRM is unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether IPO11 has a general import recognition mechanism unifying its diverse cargoes remains unknown.
  • No consensus cargo-recognition signal identified
  • No structural or RanGTP-dependence data in the corpus
  • Full cargo repertoire uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140104 molecular carrier activity 2
Pathway
R-HSA-9609507 Protein localization 2
Partners

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2020 IPO11 (Importin-11) is required for β-catenin nuclear import in APC-mutant colorectal cancer cells. IPO11 knockout reduces nuclear β-catenin protein levels and decreases β-catenin target gene activation, establishing IPO11 as a nuclear import factor for β-catenin in cells with high Wnt activity. Genome-wide CRISPR screen (DEADPOOL), IPO11 knockout cell lines, nuclear fractionation/western blot for β-catenin levels, target gene expression analysis, colony formation assay, patient-derived CRC organoid proliferation assay The Journal of cell biology High 31881079
2022 IPO11 mediates nuclear import of RPRM (Reprimo) upon X-irradiation. RPRM phosphorylation at serine 98 by CDK4/6 is required for its nuclear translocation, and this translocation depends on IPO11. Once nuclear, RPRM interacts with ATM and promotes its nuclear export and proteasomal degradation, thereby downregulating ATM levels and impairing DNA repair. IPO11 knockdown/knockout, co-immunoprecipitation (RPRM–ATM interaction), nuclear fractionation to track RPRM translocation, phosphorylation site mutagenesis (S98), CDK4/6 inhibitor treatment, in vitro and in vivo radiosensitivity assays iScience Medium 36185355

Source papers

Stage 0 corpus · 8 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 Genome-wide significant association signals in IPO11-HTR1A region specific for alcohol and nicotine codependence. Alcoholism, clinical and experimental research 36 23216389
2017 Genetic Variants in HSD17B3, SMAD3, and IPO11 Impact Circulating Lipids in Response to Fenofibrate in Individuals With Type 2 Diabetes. Clinical pharmacology and therapeutics 34 28736931
2020 IPO11 mediates βcatenin nuclear import in a subset of colorectal cancers. The Journal of cell biology 32 31881079
2019 Nicotiana benthamiana RanBP1-1 Is Involved in the Induction of Disease Resistance via Regulation of Nuclear-Cytoplasmic Transport of Small GTPase Ran. Frontiers in plant science 9 30906303
2009 [Influence of Tripterygium wilfordii on the expression of spermiogenesis related genes Herc4, Ipo11 and Mrto4 in mice]. Yi chuan = Hereditas 8 19819847
2015 Significant association between rare IPO11-HTR1A variants and attention deficit hyperactivity disorder in Caucasians. American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 6 26079129
2022 RPRM negatively regulates ATM levels through its nuclear translocation on irradiation mediated by CDK4/6 and IPO11. iScience 4 36185355
2023 Protocol for IPO11 deletion and re-expression in H460 lung cancer cells using CRISPR-Cas9 and plasmid transfection. STAR protocols 0 37195868

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