Affinage

RHOXF2

Rhox homeobox family member 2 · UniProt Q9BQY4

Length
288 aa
Mass
31.7 kDa
Annotated
2026-06-10
15 papers in source corpus 4 papers cited in narrative 4 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RHOXF2 (also called PEPP2/THG-1) is an X-linked homeobox transcriptional repressor that functions as an oncogenic driver of proliferation and tumor progression across multiple cancer types (PMID:21874235). Its transforming capacity was established by its ability to render IL-3-dependent hematopoietic cells factor-independent and induce leukemia in mice, while its knockdown impairs gastric cancer cell growth (PMID:21874235). Mechanistically, RHOXF2 sustains a stemness program in esophageal squamous cell carcinoma by competitively binding NRBP1, thereby blocking NRBP1-mediated ubiquitination and degradation of the stemness factor SALL4 and maintaining NANOG and OCT4 expression (PMID:31864704). In triple-negative breast cancer it physically interacts with HOXC13 to activate Wnt2/β-catenin signaling, driving proliferation, invasion, and migration and suppressing apoptosis; its own promoter is activated by H3K27ac histone acetylation (PMID:38697448). Beyond these defined oncogenic interactions, the direct DNA-binding targets of RHOXF2 as a transcription factor have not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2011 Medium

    Established that RHOXF2 is an oncogenic transcriptional repressor capable of driving factor-independent growth and tumorigenesis, defining its core cancer-promoting role.

    Evidence Retroviral expression cloning rendering IL-3-dependent HF6 cells factor-independent, in vivo leukemia induction in mice, and shRNA knockdown in HGC27 gastric cancer cells

    PMID:21874235

    Open questions at the time
    • No direct transcriptional target genes of the repressor identified
    • Mechanism by which it confers factor independence not resolved at the molecular level
  2. 2019 Medium

    Defined a post-translational mechanism by which RHOXF2 sustains cancer stemness, showing it stabilizes SALL4 by competing with NRBP1-mediated degradation.

    Evidence siRNA/shRNA knockdown in TE13 ESCC cells, Co-IP of THG-1–NRBP1 and NRBP1–SALL4, ubiquitination assay, and SALL4 rescue of tumorsphere formation

    PMID:31864704

    Open questions at the time
    • Stoichiometry and binding interface of the RHOXF2–NRBP1 competition not defined
    • Whether this mechanism operates outside ESCC unknown
  3. 2020 Low

    Placed RHOXF2 as a downstream effector in a regulatory RNA axis, showing it is a direct miR-3128 target whose restoration reverses LOXL1-AS1 knockdown phenotypes.

    Evidence Luciferase reporter and RNA pull-down confirming miR-3128 binding, with overexpression rescue and proliferation/invasion assays in NSCLC cells

    PMID:32636639

    Open questions at the time
    • Molecular function of RHOXF2 in NSCLC not characterized beyond pathway placement
    • Single-lab correlative axis without direct mechanistic dissection
  4. 2024 Medium

    Identified a transcription-factor partnership through which RHOXF2 activates oncogenic signaling, and revealed epigenetic control of its own expression.

    Evidence Reciprocal Co-IP and GST pull-down of RHOXF2–HOXC13, siRNA knockdown with HOXC13 rescue, ChIP-PCR and luciferase showing H3K27ac at the RHOXF2 promoter, and xenograft model in TNBC

    PMID:38697448

    Open questions at the time
    • Direct genomic binding sites of the RHOXF2–HOXC13 complex not mapped
    • How RHOXF2 mechanistically activates Wnt2 transcription unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • The direct DNA-binding targets and the unifying transcriptional logic of RHOXF2 as a homeobox repressor remain undefined across these distinct cancer contexts.
  • No genome-wide binding or transcriptomic map of RHOXF2 targets
  • Unclear whether stemness, Wnt, and factor-independence mechanisms converge on shared targets
  • No structural data on RHOXF2 protein interactions

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140110 transcription regulator activity 2
Pathway
R-HSA-1643685 Disease 3 R-HSA-162582 Signal Transduction 1
Partners

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 RHOXF2 (PEPP2) was identified as a transcriptional repressor that, when transduced into IL-3-dependent HF6 cells, renders them factor-independent and induces leukemia in mice; knockdown of RHOXF2 inhibited growth of the HGC27 gastric cancer cell line, establishing a direct cancer-promoting (oncogenic) role for RHOXF2. Retrovirus-mediated expression cloning in Ba/F3 and HF6 cell lines; shRNA knockdown in HGC27 cells; in vivo mouse transplantation assay International journal of oncology Medium 21874235
2019 RHOXF2 (THG-1) promotes tumorsphere growth in esophageal squamous cell carcinoma (ESCC) cells by binding to NRBP1, thereby preventing NRBP1-mediated ubiquitination and degradation of the stemness factor SALL4, which in turn sustains expression of stemness genes NANOG and OCT4. Exogenous SALL4 partially rescued tumorsphere formation in THG-1-deficient cells. Knockdown (siRNA/shRNA) in TE13 ESCC cells; Co-immunoprecipitation to detect THG-1–NRBP1 and NRBP1–SALL4 interactions; ubiquitination assay; rescue experiments with exogenous SALL4 Biochemical and biophysical research communications Medium 31864704
2024 RHOXF2 physically interacts with HOXC13 (demonstrated by Co-IP and GST pull-down) and activates the Wnt2/β-catenin signaling pathway in triple-negative breast cancer (TNBC) cells via this interaction; knockdown of RHOXF2 suppressed HOXC13 expression and reduced proliferation, invasion, and migration while inducing G0/G1 arrest and apoptosis, effects reversed by HOXC13 overexpression. H3K27ac histone acetylation was shown by ChIP-PCR and luciferase assay to activate the RHOXF2 promoter. Co-immunoprecipitation; GST pull-down; siRNA knockdown; HOXC13 overexpression rescue; ChIP-PCR; luciferase reporter assay; xenograft mouse model Cellular signalling Medium 38697448
2020 RHOXF2 is a direct target of miR-3128 in non-small cell lung cancer (NSCLC) cells; luciferase and pull-down assays confirmed miR-3128 binding to RHOXF2, and miR-3128 inhibitor or RHOXF2 overexpression rescued the suppression of proliferation, invasion, and migration caused by LOXL1-AS1 knockdown, placing RHOXF2 downstream of the LOXL1-AS1/miR-3128 axis. Luciferase reporter assay; RNA pull-down; siRNA knockdown; overexpression rescue; CCK-8 proliferation assay; transwell invasion/migration assay OncoTargets and therapy Low 32636639

Source papers

Stage 0 corpus · 15 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 Doing it in reverse: 3'-to-5' polymerization by the Thg1 superfamily. RNA (New York, N.Y.) 52 22456265
2010 tRNA(His) guanylyltransferase (THG1), a unique 3'-5' nucleotidyl transferase, shares unexpected structural homology with canonical 5'-3' DNA polymerases. Proceedings of the National Academy of Sciences of the United States of America 51 21059936
2011 A role for tRNA(His) guanylyltransferase (Thg1)-like proteins from Dictyostelium discoideum in mitochondrial 5'-tRNA editing. RNA (New York, N.Y.) 33 21307182
2010 Presence of a classical RRM-fold palm domain in Thg1-type 3'- 5'nucleic acid polymerases and the origin of the GGDEF and CRISPR polymerase domains. Biology direct 33 20591188
2015 Upregulation of RHOXF2 and ODF4 Expression in Breast Cancer Tissues. Cell journal 29 26464818
2011 Rapid evolution and copy number variation of primate RHOXF2, an X-linked homeobox gene involved in male reproduction and possibly brain function. BMC evolutionary biology 29 21988730
2013 Structural studies of a bacterial tRNA(HIS) guanylyltransferase (Thg1)-like protein, with nucleotide in the activation and nucleotidyl transfer sites. PloS one 18 23844012
2011 Identification of RHOXF2 (PEPP2) as a cancer-promoting gene by expression cloning. International journal of oncology 18 21874235
2016 Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein. Science advances 14 27051866
2020 LOXL1-AS1 Contributes to Non-Small Cell Lung Cancer Progression by Regulating miR-3128/RHOXF2 Axis. OncoTargets and therapy 13 32636639
2014 Saccharomyces cerevisiae Thg1 uses 5'-pyrophosphate removal to control addition of nucleotides to tRNA(His.). Biochemistry 12 24548272
2019 THG-1 suppresses SALL4 degradation to induce stemness genes and tumorsphere formation through antagonizing NRBP1 in squamous cell carcinoma cells. Biochemical and biophysical research communications 11 31864704
2014 RHOXF2 gene, a new candidate gene for spermatogenesis failure. Basic and clinical andrology 6 25780578
2024 H3K27ac-induced RHOXF2 activates Wnt2/β-catenin pathway by binding to HOXC13 to aggravate the malignant progression of triple negative breast cancer. Cellular signalling 3 38697448
2024 Thg1 family 3'-5' RNA polymerases as tools for targeted RNA synthesis. RNA (New York, N.Y.) 2 38997129

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