Affinage

RHBDF1

Inactive rhomboid protein 1 · UniProt Q96CC6

Length
855 aa
Mass
97.4 kDa
Annotated
2026-04-28
18 papers in source corpus 14 papers cited in narrative 14 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RHBDF1 (iRhom1) is a catalytically inactive rhomboid pseudoprotease that functions as a central regulatory cofactor of ADAM17 and an integrator of ER proteostasis. Its transmembrane helix and a conserved cytoplasmic re-entry loop form a molecular relay—resolved by cryo-EM—that promotes ADAM17 maturation, ER-to-surface trafficking, and sheddase activation, controlling release of EGFR ligands (TGF-α), TNF receptors, and neuronal substrates such as MEGF10, while its extended N-terminal cytoplasmic domain negatively tunes ADAM17 activity (PMID:15965977, PMID:26535007, PMID:34613632, PMID:42024498). Beyond ADAM17 regulation, RHBDF1 maintains ER homeostasis by stabilizing the chaperone BiP and by promoting proteasome assembly through interaction with PAC1/PAC2, and it modulates glycolysis by competitively shielding GPI from TRIM32-mediated ubiquitination (PMID:26109405, PMID:37798352, PMID:37979663). RHBDF1 additionally facilitates PKCζ nuclear import via importin β1, disrupting the Par apicobasal polarity complex and tight/adherens junctions in epithelial cells (PMID:39582014).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2005 High

    Identification of RHBDF1 as a catalytically dead, ER/Golgi-resident rhomboid-family protein that dimerizes and physically engages TGF-α established the gene as a pseudoprotease with a potential role in EGFR ligand processing.

    Evidence cDNA cloning, subcellular fractionation, co-immunoprecipitation, active-site sequence analysis, and Drosophila functional assay

    PMID:15965977

    Open questions at the time
    • Whether RHBDF1 promotes TGF-α shedding or only intracellular trafficking was unresolved
    • Identity of the metalloprotease partner was unknown
    • No structure of the RHBDF1 transmembrane domain
  2. 2008 High

    Demonstrating that RHBDF1 is required for GPCR-induced TGF-α shedding and subsequent EGFR transactivation positioned it as a specific gatekeeper of ligand release rather than ligand production.

    Evidence siRNA knockdown and overexpression in cells with EGFR/MAPK/AKT phosphorylation readouts and TGF-α secretion assays

    PMID:18832597

    Open questions at the time
    • The shedding enzyme mediating TGF-α release downstream of RHBDF1 was not identified
    • Whether RHBDF1 acts at the ER or at the cell surface was unclear
  3. 2015 High

    Linking RHBDF1 directly to ADAM17 maturation and showing that the N-terminal cytoplasmic domain is an inhibitory module unified prior observations into a model where iRhom1 is an essential ADAM17 regulatory subunit, while the parallel discovery of PAC1/PAC2 interaction revealed an ADAM17-independent role in ER-stress-induced proteasome assembly.

    Evidence ΔN-mutant genetic screen with ADAM17 inhibitor rescue and TNFR shedding assays; genome-wide cDNA screen with co-IP, native-gel proteasome analysis, and Drosophila rescue

    PMID:26109405 PMID:26535007

    Open questions at the time
    • Structural basis of the iRhom1–ADAM17 interaction was unknown
    • Whether proteasome-stimulatory and ADAM17-regulatory functions are coordinated was untested
    • Redundancy with iRhom2 complicated tissue-specific loss-of-function interpretation
  4. 2020 Medium

    Showing that endogenous iRhom1 reaches the cell surface and that its stability is ADAM17-independent (unlike iRhom2) clarified that iRhom1 has autonomous functions and distinct regulation from its paralog; transcriptional induction by shear stress via KLF2 placed it in vascular mechano-sensing.

    Evidence Cell-surface biotinylation in ADAM17-KO MEFs; primary endothelial cells under shear stress with qPCR and ADAM17 maturation assays

    PMID:32060096 PMID:33335915

    Open questions at the time
    • Both findings from single laboratories, awaiting independent replication
    • Function of surface-localized iRhom1 pool was not determined
    • Downstream vascular phenotype of iRhom1 loss in shear-stress context was unexplored
  5. 2021 High

    In vivo secretome profiling of iRhom1-knockout mouse neurons identified MEGF10 as a physiological, nervous-system-specific ADAM17 substrate controlled by iRhom1, extending its functional scope beyond EGFR ligands.

    Evidence iRhom1-KO mouse model with hiSPECS secretome proteomics, CSF proteomics, and ADAM17-KO MEF validation

    PMID:34613632

    Open questions at the time
    • Functional consequence of reduced MEGF10 shedding in the CNS was not addressed
    • Full catalogue of iRhom1-specific versus iRhom2-dependent substrates in vivo remains incomplete
  6. 2022 Medium

    Discovery of the alternative splice variant RHX6 that antagonizes RHBDF1 by blocking ADAM17 maturation and TGF-α trafficking revealed a built-in post-transcriptional brake on iRhom1 function, regulated by the splicing factor RBM4.

    Evidence Overexpression of RHX6 splicing variant with TACE maturation, pro-TGF-α trafficking, and proliferation/migration assays; RBM4 knockdown

    PMID:35595096

    Open questions at the time
    • Physiological tissue contexts where RHX6 predominates are not defined
    • Mechanism by which RHX6 interferes with ADAM17 at the molecular level is not resolved
  7. 2023 Medium

    Two ADAM17-independent functions were delineated: RHBDF1 stabilizes BiP to maintain ER protein homeostasis, and it competitively shields GPI from TRIM32-mediated K27/K63 ubiquitination to sustain glycolysis, broadening its role to metabolic and proteostasis regulation.

    Evidence Co-IP and SPR for BiP binding with RHBDF1-KO unfolded protein aggregation assay; co-IP, ubiquitination assays, mutagenesis (R747, Y799), and in vivo mouse melanoma model for TRIM32/GPI axis

    PMID:37798352 PMID:37979663

    Open questions at the time
    • BiP interaction and TRIM32 competition each demonstrated in single labs
    • Whether these functions depend on iRhom1 pseudoprotease fold or only its transmembrane domain is unknown
    • Relative importance of ADAM17-dependent versus -independent functions in normal tissue physiology is unclear
  8. 2024 Medium

    Identification of RHBDF1 as a facilitator of PKCζ nuclear translocation via importin β1, leading to disruption of apicobasal polarity, provided a mechanistic route linking RHBDF1 to epithelial-to-mesenchymal transition-like phenotypes.

    Evidence Co-IP of RHBDF1 with importin β1 and PKCζ, nuclear fractionation, PKCζ inhibitor rescue, and polarity/junction marker analysis in mammary epithelial cells

    PMID:39582014

    Open questions at the time
    • Single-lab study; independent confirmation needed
    • Whether PKCζ transport function is separable from ADAM17 regulatory function is unknown
    • In vivo relevance for mammary tissue polarity not demonstrated
  9. 2026 High

    The cryo-EM structure of the ADAM17 zymogen–iRhom1 complex revealed the transmembrane helix and cytoplasmic re-entry loop as a signal relay, and a cardiomyopathy-associated human iRhom1 mutation that disrupts ADAM17 maturation linked the structural mechanism to human disease.

    Evidence Cryo-EM structure determination, all-atom MD simulations, disease-associated mutant analysis of ADAM17 maturation/trafficking

    PMID:42024498

    Open questions at the time
    • Full-length structure including the N-terminal inhibitory domain is lacking
    • Structural basis for iRhom1-specific versus iRhom2-specific substrate selectivity remains unresolved
    • Whether the cardiomyopathy phenotype is solely ADAM17-dependent or involves other iRhom1 partners is not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • How iRhom1 coordinates its multiple partner interactions (ADAM17, BiP, PAC1/PAC2, TRIM32/GPI, importin β1/PKCζ) spatiotemporally within the ER and beyond, and which functions dominate in specific tissues, remains an open question.
  • No integrative study has examined all iRhom1 functions in a single model system
  • Full-length iRhom1 structure including the disordered N-terminal domain is needed
  • Conditional tissue-specific knockout phenotyping beyond the nervous system is limited

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 3 GO:0098772 molecular function regulator activity 3
Localization
GO:0005783 endoplasmic reticulum 4 GO:0005794 Golgi apparatus 1 GO:0005886 plasma membrane 1
Pathway
R-HSA-162582 Signal Transduction 4 R-HSA-392499 Metabolism of proteins 3 R-HSA-8953897 Cellular responses to stimuli 3 R-HSA-9609507 Protein localization 3
Complex memberships
ADAM17-iRhom1 complex

Evidence

Reading pass · 14 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2005 RHBDF1 (p100hRho) is a seven-transmembrane protein with a long N-terminal cytoplasmic extension, localizes to the endoplasmic reticulum and Golgi (not cell surface), forms dimers, and interacts with TGF-alpha ligands through a luminal interaction with the EGF core ectodomain. It lacks critical residues for serine protease activity and is thus catalytically inactive. cDNA cloning, subcellular fractionation/localization, co-immunoprecipitation, active-site sequence analysis, Drosophila functional assay Developmental Dynamics High 15965977
2008 RHBDF1 localizes mainly in the endoplasmic reticulum and participates in GPCR-mediated EGFR transactivation by promoting GRP-stimulated secretion (shedding) of TGF-alpha, without affecting production of latent TGF-alpha; RHBDF1 silencing blocks GRP-induced phosphorylation of EGFR, p44/42 MAPK, and AKT while leaving direct EGF-stimulated EGFR signaling intact. siRNA knockdown, overexpression, EGFR/MAPK/AKT phosphorylation assays, TGF-alpha secretion assay, subcellular localization FASEB Journal High 18832597
2015 iRhom1 (RHBDF1) mediates intracellular transport and maturation of ADAM17; deletion of the extended amino-terminal cytoplasmic domain of iRhom1 increases ADAM17 activity and TNFR shedding, demonstrating that the N-terminal cytoplasmic domain negatively regulates ADAM17 activity. iRhom1 and iRhom2 are functionally redundant in this context. Genetic screen with ΔN mutants, ADAM17 inhibitor experiments, TNFR shedding assays, cell death assays Science Signaling High 26535007
2015 iRhom1 (RHBDF1) stimulates proteasome activity by interacting with 20S proteasome assembly chaperones PAC1 and PAC2, stabilizing them and promoting their dimerization; iRhom1 expression is upregulated by ER stressors, leading to enhanced proteasome activity particularly in ER-containing microsomes. Genome-wide cDNA functional screen, siRNA knockdown, overexpression, native-gel and fractionation analysis, co-immunoprecipitation, Drosophila in vivo rescue assay Scientific Reports High 26109405
2020 Endogenous iRhom1 (RHBDF1) is present on the cell surface (shown by cell-surface biotinylation). Unlike iRhom2, the stability of iRhom1 does not depend on ADAM17 — iRhom1 levels are slightly increased rather than reduced in ADAM17-deficient mouse embryonic fibroblasts, indicating iRhom1 and ADAM17 are not obligate stabilizing partners. Cell-surface biotinylation of endogenous proteins, ADAM17-knockout mouse embryonic fibroblasts, western blot Journal of Biological Chemistry Medium 32060096
2020 In endothelial cells, iRhom1 (RHBDF1) is upregulated by physiological shear stress (partially via transcription factor KLF2), while iRhom2 is upregulated by inflammatory cytokines via NFκB/AP-1; shear stress-driven iRhom1 upregulation affects ADAM17 maturation and surface expression independently of inflammatory stimulation. Primary endothelial cell culture with shear stress and cytokine stimulation, qPCR, transcriptional inhibitors, ADAM17 maturation and JAM-A shedding assays Frontiers in Cardiovascular Medicine Medium 33335915
2021 iRhom1 (RHBDF1) controls ectodomain shedding of membrane proteins in the nervous system through ADAM17; proteomic secretome analysis of iRhom1-deficient mouse neurons and cerebrospinal fluid identified MEGF10 as an iRhom1-dependent ADAM17 substrate, validated further using ADAM17-deficient mouse embryonic fibroblasts. iRhom1-knockout mouse model, hiSPECS secretome proteomics, CSF proteomics, ADAM17-KO MEF validation FASEB Journal High 34613632
2022 An alternative splicing variant of RHBDF1 (RHX6) antagonizes RHBDF1 activity by inhibiting ADAM17/TACE maturation and blocking intracellular transport of pro-TGF-alpha to the cell surface, thereby inhibiting EGFR activation; RHX6 production is regulated by the alternative splicing regulator RBM4. Overexpression of splicing variant, TACE maturation assay, pro-TGF-alpha trafficking assay, proliferation/migration assays, RBM4 knockdown Journal of Biological Chemistry Medium 35595096
2023 RHBDF1 directly interacts with BiP (GRP78) and stabilizes BiP protein; RHBDF1 deletion causes aggregation of unfolded proteins near the ER, and the RHBDF1-BiP interaction maintains ER protein homeostasis in breast cancer cells. Co-immunoprecipitation, RHBDF1 deletion/silencing, unfolded protein aggregation assay, SPR binding assay with derived peptide Acta Pharmacologica Sinica Medium 37798352
2023 RHBDF1 protects glucose-6-phosphate isomerase (GPI) from TRIM32-mediated K27/K63-linked ubiquitination and lysosomal degradation by competing with GPI for binding to the NHL domain of the E3 ubiquitin ligase TRIM32 via its multi-transmembrane domain; mouse RHBDF1 residues R747 and Y799 are critical for this competitive binding. Co-immunoprecipitation, ubiquitination assays, mutagenesis of RHBDF1 (R747, Y799), lysosomal degradation assays, in vivo mouse melanoma model Pharmacological Research Medium 37979663
2024 RHBDF1 promotes PERK expression and the PERK/peIF2α UPR pathway via the JNK/FoxO3 axis: RHBDF1 activates JNK, causing FoxO3 to translocate into the nucleus and drive PERK transcription; RHBDF1 deficiency reduces PERK, pPERK, and peIF2α levels. RHBDF1 knockdown/overexpression, nuclear fractionation of FoxO3, western blotting for PERK/pPERK/peIF2α, JNK activation assay Acta Biochimica et Biophysica Sinica Low 39420837
2024 RHBDF1 interacts with YAP1, and this interaction increases Smad2 phosphorylation and promotes Smad2 nuclear translocation, modulating cisplatin sensitivity in small cell lung cancer cells. Co-immunoprecipitation, gain- and loss-of-function experiments, western blotting for pSmad2, nuclear fractionation Heliyon Low 39027514
2024 RHBDF1 facilitates nuclear translocation of PKCζ by interacting with both importin β1 and PKCζ and promoting PKCζ phosphorylation, leading to disruption of the Par apicobasal polarity complex, loss of tight/adherens junction proteins, and increased cell mobility in mammary epithelial cells. Co-immunoprecipitation (RHBDF1 with importin β1 and PKCζ), PKCζ phosphorylation assay, nuclear fractionation, PKCζ inhibitor rescue experiment, overexpression in mammary epithelial cells Biological Research Medium 39582014
2026 Cryo-EM structure of the ADAM17 zymogen bound to iRhom1 reveals that a transmembrane α-helix and a conserved cytoplasmic 're-entry loop' in iRhom1 function as a molecular relay transmitting intracellular signals across the membrane to activate ADAM17; a cardiomyopathy-associated human iRhom1 mutation disrupts ADAM17 maturation and trafficking. Cryo-electron microscopy structure determination, all-atom molecular dynamics simulations, disease-associated mutant functional analysis (ADAM17 maturation/trafficking assay) Cell Reports High 42024498

Source papers

Stage 0 corpus · 18 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2008 Human rhomboid family-1 gene RHBDF1 participates in GPCR-mediated transactivation of EGFR growth signals in head and neck squamous cancer cells. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 67 18832597
2015 Deletions in the cytoplasmic domain of iRhom1 and iRhom2 promote shedding of the TNF receptor by the protease ADAM17. Science signaling 50 26535007
2005 Characterization of a human rhomboid homolog, p100hRho/RHBDF1, which interacts with TGF-alpha family ligands. Developmental dynamics : an official publication of the American Association of Anatomists 37 15965977
2024 Inhibition of iRhom1 by CD44-targeting nanocarrier for improved cancer immunochemotherapy. Nature communications 34 38177179
2015 iRhom1 regulates proteasome activity via PAC1/2 under ER stress. Scientific reports 30 26109405
2018 RHBDF1 regulates APC-mediated stimulation of the epithelial-to-mesenchymal transition and proliferation of colorectal cancer cells in part via the Wnt/β-catenin signalling pathway. Experimental cell research 26 29654741
2020 ADAM17 stabilizes its interacting partner inactive Rhomboid 2 (iRhom2) but not inactive Rhomboid 1 (iRhom1). The Journal of biological chemistry 22 32060096
2020 Differential Induction of the ADAM17 Regulators iRhom1 and 2 in Endothelial Cells. Frontiers in cardiovascular medicine 19 33335915
1996 Characterization and comparison of the human and mouse Dist1/alpha-globin complex reveals a tightly packed multiple gene cluster containing differentially expressed transcription units. Genomics 19 8838797
2021 The pseudoprotease iRhom1 controls ectodomain shedding of membrane proteins in the nervous system. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 10 34613632
2021 Inactive rhomboid proteins RHBDF1 and RHBDF2 (iRhoms): a decade of research in murine models. Mammalian genome : official journal of the International Mammalian Genome Society 9 34477920
2023 RHBDF1 deficiency suppresses melanoma glycolysis and enhances efficacy of immunotherapy by facilitating glucose-6-phosphate isomerase degradation via TRIM32. Pharmacological research 6 37979663
2022 Alternative splicing of the human rhomboid family-1 gene RHBDF1 inhibits epidermal growth factor receptor activation. The Journal of biological chemistry 4 35595096
2023 Pentapeptide PYRAE triggers ER stress-mediated apoptosis of breast cancer cells in mice by targeting RHBDF1-BiP interaction. Acta pharmacologica Sinica 3 37798352
2024 RHBDF1 modulates cisplatin sensitivity of small cell lung cancer through YAP1/Smad2 signaling pathway. Heliyon 1 39027514
2024 RHBDF1 promotes PERK expression through the JNK/FoxO3 pathway in breast cancer cells. Acta biochimica et biophysica Sinica 1 39420837
2024 Perturbation of mammary epithelial cell apicobasal polarity by RHBDF1-facilitated nuclear translocation of PKCζ. Biological research 1 39582014
2026 Structural basis for ADAM17 activation by the iRhom1 pseudoprotease. Cell reports 0 42024498