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Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the Ras-Raf and Ras-RalGDS complexes. |
Journal of molecular biology |
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Molecular and cellular biology |
253 |
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Structural basis for the interaction of Ras with RalGDS. |
Nature structural biology |
220 |
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Growth factors can activate ATF2 via a two-step mechanism: phosphorylation of Thr71 through the Ras-MEK-ERK pathway and of Thr69 through RalGDS-Src-p38. |
The EMBO journal |
185 |
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Reovirus oncolysis: the Ras/RalGEF/p38 pathway dictates host cell permissiveness to reovirus infection. |
Proceedings of the National Academy of Sciences of the United States of America |
158 |
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RalGDS is required for tumor formation in a model of skin carcinogenesis. |
Cancer cell |
141 |
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Presentation of RGDS epitopes on self-assembled nanofibers of branched peptide amphiphiles. |
Biomacromolecules |
119 |
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RalGDS-like factor (Rlf) is a novel Ras and Rap 1A-associating protein. |
Oncogene |
117 |
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Beta-arrestins regulate a Ral-GDS Ral effector pathway that mediates cytoskeletal reorganization. |
Nature cell biology |
112 |
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Temperature-responsive cell culture surfaces enable "on-off" affinity control between cell integrins and RGDS ligands. |
Biomacromolecules |
103 |
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Covalent immobilization of RGDS on hydrogel surfaces to direct cell alignment and migration. |
Journal of controlled release : official journal of the Controlled Release Society |
102 |
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Regulation of choline kinase activity by Ras proteins involves Ral-GDS and PI3K. |
Oncogene |
102 |
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Elegantin and albolabrin purified peptides from viper venoms: homologies with the RGDS domain of fibrinogen and von Willebrand factor. |
Biochimica et biophysica acta |
94 |
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Activation of the alpha 4 beta 1 integrin through the beta 1 subunit induces recognition of the RGDS sequence in fibronectin. |
The Journal of cell biology |
92 |
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Activation of the RalGEF/Ral pathway promotes prostate cancer metastasis to bone. |
Molecular and cellular biology |
89 |
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Structural and biochemical analysis of Ras-effector signaling via RalGDS. |
FEBS letters |
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The RalGEF-Ral Effector Signaling Network: The Road Less Traveled for Anti-Ras Drug Discovery. |
Genes & cancer |
88 |
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RGDS tetrapeptide binds to osteoblasts and inhibits fibronectin-mediated adhesion. |
Bone |
81 |
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Fibroblast adhesion to RGDS shows novel features compared with fibronectin. |
The Journal of cell biology |
76 |
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Three-dimensional structure of the Ras-interacting domain of RalGDS. |
Nature structural biology |
72 |
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Selective inactivation of the Arg-Gly-Asp-Ser (RGDS) binding site in von Willebrand factor by site-directed mutagenesis. |
The Journal of biological chemistry |
68 |
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Pressure-induced local unfolding of the Ras binding domain of RalGDS. |
Nature structural biology |
66 |
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RalGDS functions in Ras- and cAMP-mediated growth stimulation. |
The Journal of biological chemistry |
66 |
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RalGDS family members couple Ras to Ral signalling and that's not all. |
Cellular signalling |
65 |
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Regulation of interaction of ras p21 with RalGDS and Raf-1 by cyclic AMP-dependent protein kinase. |
The Journal of biological chemistry |
65 |
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| 1995 |
The cDNA sequence of human endothelial cell multimerin. A unique protein with RGDS, coiled-coil, and epidermal growth factor-like domains and a carboxyl terminus similar to the globular domain of complement C1q and collagens type VIII and X. |
The Journal of biological chemistry |
64 |
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Synthetic RGDS peptide attenuates lipopolysaccharide-induced pulmonary inflammation by inhibiting integrin signaled MAP kinase pathways. |
Respiratory research |
62 |
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PDK1 mediates growth factor-induced Ral-GEF activation by a kinase-independent mechanism. |
The EMBO journal |
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Vibrational Stark effect spectroscopy at the interface of Ras and Rap1A bound to the Ras binding domain of RalGDS reveals an electrostatic mechanism for protein-protein interaction. |
The journal of physical chemistry. B |
58 |
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Adhesion and migration of marrow-derived osteoblasts on injectable in situ crosslinkable poly(propylene fumarate-co-ethylene glycol)-based hydrogels with a covalently linked RGDS peptide. |
Journal of biomedical materials research. Part A |
56 |
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Functional role of sialyl Lewis X and fibronectin-derived RGDS peptide analogue on tumor-cell arrest in lungs followed by extravasation. |
International journal of cancer |
56 |
8631600 |
| 1996 |
Identification of a novel RalGDS-related protein as a candidate effector for Ras and Rap1. |
The Journal of biological chemistry |
56 |
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Mechanism of fibronectin-mediated cell migration: dependence or independence of cell migration susceptibility on RGDS-directed receptor (integrin). |
Experimental cell research |
56 |
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RGDS peptide induces caspase 8 and caspase 9 activation in human endothelial cells. |
Blood |
55 |
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Recombinant domain III of perlecan promotes cell attachment through its RGDS sequence. |
The Journal of biological chemistry |
55 |
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rgf encodes a novel two-component signal transduction system of Streptococcus agalactiae. |
Infection and immunity |
54 |
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A novel RalGEF-like protein, RGL3, as a candidate effector for rit and Ras. |
The Journal of biological chemistry |
52 |
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| 1988 |
Ganglioside-dependent adhesion events of human neuroblastoma cells regulated by the RGDS-dependent fibronectin receptor and proteoglycans. |
Experimental cell research |
52 |
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Fibronectin fragments containing the RGDS cell-binding domain mediate monocyte migration into the rabbit lung. A potential mechanism for C5 fragment-induced monocyte lung accumulation. |
The Journal of clinical investigation |
51 |
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The integrin-blocking peptide RGDS inhibits airway smooth muscle remodeling in a guinea pig model of allergic asthma. |
American journal of respiratory and critical care medicine |
50 |
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Ras oncogene induces beta-galactoside alpha2,6-sialyltransferase (ST6Gal I) via a RalGEF-mediated signal to its housekeeping promoter. |
European journal of biochemistry |
49 |
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Guanine exchange factor RalGDS mediates exocytosis of Weibel-Palade bodies from endothelial cells. |
Blood |
45 |
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Cell-attachment activities of surface immobilized oligopeptides RGD, RGDS, RGDV, RGDT, and YIGSR toward five cell lines. |
Journal of biomaterials science. Polymer edition |
45 |
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Enhanced articular cartilage by human mesenchymal stem cells in enzymatically mediated transiently RGDS-functionalized collagen-mimetic hydrogels. |
Acta biomaterialia |
44 |
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A role for RalGDS and a novel Ras effector in the Ras-mediated inhibition of skeletal myogenesis. |
The Journal of biological chemistry |
43 |
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Effects of RGDS sequence genetically interfused in the silk fibroin light chain protein on chondrocyte adhesion and cartilage synthesis. |
Biomaterials |
42 |
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The activation of RalGDS can be achieved independently of its Ras binding domain. Implications of an activation mechanism in Ras effector specificity and signal distribution. |
The Journal of biological chemistry |
42 |
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Involvement of phosphatidylinositol 3-kinase, but not RalGDS, in TC21/R-Ras2-mediated transformation. |
The Journal of biological chemistry |
41 |
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A second cell-binding domain on fibronectin (RGDS-independent) for neurite extension of human neuroblastoma cells. |
Experimental cell research |
41 |
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RGDS peptides immobilized on titanium alloy stimulate bone cell attachment, differentiation and confer resistance to apoptosis. |
Journal of biomedical materials research. Part A |
39 |
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RGDS-functionalized polyethylene glycol hydrogel-coated magnetic iron oxide nanoparticles enhance specific intracellular uptake by HeLa cells. |
International journal of nanomedicine |
38 |
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Synthesis and cell attachment activity of bioactive oligopeptides: RGD, RGDS, RGDV, and RGDT. |
Journal of biomedical materials research |
37 |
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RalGDS couples growth factor signaling to Akt activation. |
Molecular and cellular biology |
36 |
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Evaluation of L929 fibroblast attachment and proliferation on Arg-Gly-Asp-Ser (RGDS)-immobilized chitosan in serum-containing/serum-free cultures. |
Journal of bioscience and bioengineering |
33 |
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| 2003 |
Arg-Gly-Asp-Ser (RGDS) peptide stimulates transforming growth factor beta1 transcription and secretion through integrin activation. |
FASEB journal : official publication of the Federation of American Societies for Experimental Biology |
32 |
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| 2015 |
Distinct sensitivities to phosphate deprivation suggest that RGF peptides play disparate roles in Arabidopsis thaliana root development. |
The New phytologist |
30 |
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Intracellular targets of RGDS peptide in melanoma cells. |
Molecular cancer |
29 |
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Glycoprotein IIb-IIIa and RGD(S) are not important for fibronectin-dependent platelet adhesion under flow conditions. |
Blood |
29 |
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The bioactivity of composite Fmoc-RGDS-collagen gels. |
Biomaterials science |
28 |
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| 1999 |
Interdependent action of RalGEF and Erk in Ras-induced primitive endoderm differentiation of F9 embryonal carcinoma cells. |
Oncogene |
27 |
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| 1993 |
Interaction of human malignant melanoma tumor spheroids with endothelium and reconstituted basement membrane: modulation by RGDS. |
International journal of cancer |
26 |
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| 1997 |
RGDS tetrapeptide and hippocampal in vitro kindling in rats: evidence for integrin-mediated physiological stability. |
Neuroscience letters |
25 |
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Soft PEG-Hydrogels with Independently Tunable Stiffness and RGDS-Content for Cell Adhesion Studies. |
Macromolecular bioscience |
24 |
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The antithrombotic effect of KRDS, a lactotransferrin peptide, compared with RGDS. |
Nouvelle revue francaise d'hematologie |
23 |
2349083 |
| 2021 |
Root meristem growth factor RGF, a sulfated peptide hormone in plants. |
Peptides |
22 |
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Effects of CD44 antibody-- or RGDS peptide--immobilized magnetic beads on cell proliferation and chondrogenesis of mesenchymal stem cells. |
Journal of biomedical materials research. Part A |
22 |
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| 1991 |
Antiplatelet and antithrombotic effects of platelet glycoprotein IIb/IIIa (GPIIb/IIIa) inhibition by arginine-glycine-aspartic acid-serine (RGDS) and arginine-glycine-aspartic acid (RGD) (O-me)Y (SC-46749). |
The Journal of pharmacology and experimental therapeutics |
21 |
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| 1990 |
Synthetic RGDS-containing peptides of von Willebrand factor inhibit platelet adhesion to collagen. |
Thrombosis and haemostasis |
21 |
2084945 |
| 2016 |
RGDS- and TAT-Conjugated Upconversion of NaYF4:Yb(3+)/Er(3+)&SiO2 Nanoparticles: In Vitro Human Epithelioid Cervix Carcinoma Cellular Uptake, Imaging, and Targeting. |
ACS applied materials & interfaces |
20 |
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Control of fibrotic changes through the synergistic effects of anti-fibronectin antibody and an RGDS-tagged form of the same antibody. |
Scientific reports |
19 |
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| 2012 |
Role of electrostatics in differential binding of RalGDS to Rap mutations E30D and K31E investigated by vibrational spectroscopy of thiocyanate probes. |
The journal of physical chemistry. B |
19 |
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RalGDS comes of age. |
Cancer cell |
19 |
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| 2017 |
Single-molecule fluorescence imaging of RalGDS on cell surfaces during signal transduction from Ras to Ral. |
Biophysics and physicobiology |
18 |
28744424 |
| 2016 |
RGDS- and SIKVAVS-Modified Superporous Poly(2-hydroxyethyl methacrylate) Scaffolds for Tissue Engineering Applications. |
Macromolecular bioscience |
18 |
27460202 |
| 2015 |
RILP suppresses invasion of breast cancer cells by modulating the activity of RalA through interaction with RalGDS. |
Cell death & disease |
18 |
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RalGDS-dependent cardiomyocyte autophagy is required for load-induced ventricular hypertrophy. |
Journal of molecular and cellular cardiology |
18 |
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| 1993 |
Inhibition of tumor metastasis by Arg-Gly-Asp-Ser (RGDS) peptide conjugated with sulfated chitin derivative, SCM-chitin-RGDS. |
Clinical & experimental metastasis |
18 |
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| 2010 |
Hydrogel cell patterning incorporating photocaged RGDS peptides. |
Biomedical microdevices |
17 |
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| 1998 |
Interactions of the amino acid residue at position 31 of the c-Ha-Ras protein with Raf-1 and RalGDS. |
The Journal of biological chemistry |
17 |
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| 2014 |
Conserved electrostatic fields at the Ras-effector interface measured through vibrational Stark effect spectroscopy explain the difference in tilt angle in the Ras binding domains of Raf and RalGDS. |
Physical chemistry chemical physics : PCCP |
16 |
25127074 |
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JAK/STAT3-dependent activation of the RalGDS/Ral pathway in M1 mouse myeloid leukemia cells. |
The Journal of biological chemistry |
16 |
11432872 |
| 1995 |
Antimetastatic activities of synthetic Arg-Gly-Asp-Ser (RGDS) and Arg-Leu-Asp-Ser (RLDS) peptide analogues and their inhibitory mechanisms. |
Biological & pharmaceutical bulletin |
16 |
8787788 |
| 2013 |
The RalGEF/Ral pathway: evaluating an intervention opportunity for Ras cancers. |
The Enzymes |
15 |
25034103 |
| 2011 |
RGDS-fuctionalized alginates improve the survival rate of encapsulated embryonic stem cells during cryopreservation. |
Cryo letters |
15 |
22020461 |
| 2002 |
Modulation of phospholipase D by Ras proteins mediated by its effectors Ral-GDS, PI3K and Raf-1. |
International journal of oncology |
15 |
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| 1992 |
Keratinocyte migration is partially supported by the cell-binding domain of fibronectin and is RGDS-dependent. |
The Journal of investigative dermatology |
15 |
1431231 |
| 2001 |
High-pressure NMR study of the complex of a GTPase Rap1A with its effector RalGDS. A conformational switch in RalGDS revealed from non-linear pressure shifts. |
FEBS letters |
14 |
11602241 |
| 2000 |
The human RGL (RalGDS-like) gene: cloning, expression analysis and genomic organization. |
Biochimica et biophysica acta |
14 |
10760592 |
| 1994 |
Tetrafibricin has a high selectivity for GPIIb/IIIa: comparison of the effects of tetrafibricin and RGDS on GPIIb/IIIa and the vitronectin receptor. |
Biochemical and biophysical research communications |
13 |
7524499 |
| 2005 |
RGDS and DGEA-induced [Ca2+]i signalling in human dermal fibroblasts. |
Biochimica et biophysica acta |
12 |
16199103 |
| 1997 |
Studies on tumor-promoting activity of polyethylene: inhibitory activity of metabolic cooperation on polyethylene surfaces is markedly decreased by surface modification with collagen but not with RGDS peptide. |
Journal of biomedical materials research |
12 |
9138073 |
| 2021 |
Design of RGDS Peptide-Immobilized Self-Assembling β-Strand Peptide from Barnacle Protein. |
International journal of molecular sciences |
11 |
33513895 |
| 2021 |
Evolution of RGF/GLV/CLEL Peptide Hormones and Their Roles in Land Plant Growth and Regulation. |
International journal of molecular sciences |
11 |
34948169 |
| 2019 |
Developmental fidelity is imposed by genetically separable RalGEF activities that mediate opposing signals. |
PLoS genetics |
11 |
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RGDS covalently surfaced nanodiamond as a tumor targeting carrier of VEGF-siRNA: synthesis, characterization and bioassay. |
Journal of materials chemistry. B |
11 |
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Synthetic RGDS peptide attenuates mechanical ventilation-induced lung injury in rats. |
Experimental lung research |
11 |
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| 2023 |
Functionalization of 3D printed polymeric bioresorbable stents with a dual cell-adhesive peptidic platform combining RGDS and YIGSR sequences. |
Biomaterials science |
10 |
37198968 |
| 2017 |
Contribution of the RgfD Quorum Sensing Peptide to rgf Regulation and Host Cell Association in Group B Streptococcus. |
Genes |
10 |
28067833 |
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Preparation and Characterization of RGDS/Nanodiamond as a Vector for VEGF-siRNA Delivery. |
Journal of biomedical nanotechnology |
10 |
26301301 |
| 2007 |
Physico-chemical and thermodynamic aspects of fibroblastic attachment on RGDS-modified chitosan membranes. |
Colloids and surfaces. B, Biointerfaces |
10 |
17904828 |