Affinage

PTMA

Prothymosin alpha · UniProt P06454

Length
111 aa
Mass
12.2 kDa
Annotated
2026-06-10
12 papers in source corpus 6 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PTMA (Prothymosin α) is a multifunctional, intrinsically charged nuclear and cytoplasmic protein that operates as a chromatin/chaperone factor and a regulator of mitochondrial and transcriptional programs across diverse cell types (PMID:40408476, PMID:40474236, PMID:41544148). In the nucleus, PTMA acts as a linker histone chaperone that promotes release of histone H1.0 from chromatin at sites of DNA damage and is required for efficient PARP1 recruitment, with PTMA-null cells failing to evict H1.0 and showing heightened sensitivity to DNA-damaging agents (PMID:40474236). PTMA also tunes chromatin-associated transcriptional output by binding MBD3 and inhibiting the deacetylase activity of the MBD3/HDAC1 NuRD complex, thereby raising STAT3 acetylation and phosphorylation to drive cardiomyocyte proliferation (PMID:40408476). In the mitochondrial/metabolic axis, PTMA binds the mitochondrial transcription factor TFAM to preserve mitochondrial DNA integrity and sustain oxidative phosphorylation in CD8 T cells—a function placed downstream of TCF1 and required for T cell persistence and the efficacy of PD-1 blockade (PMID:41544148)—and engages HMGB1 to support oxidative phosphorylation and restrain ROS accumulation and apoptosis in esophageal cancer cells (PMID:37065565). PTMA additionally acts downstream of TGFβ1 to modulate fibroblast proliferation and SMAD4-associated ECM production (PMID:29088825), and macrophage-derived phosphorylated PTMA can induce hyphal filamentation in Candida albicans (PMID:34433036).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2017 Medium

    Established PTMA as a functional node in TGFβ1-driven fibrosis, addressing whether PTMA actively contributes to ECM production rather than being a passive marker.

    Evidence siRNA knockdown and overexpression in primary human oral submucous fibroblasts with proliferation and ECM marker readouts in a TGFβ1-induced fibrosis model

    PMID:29088825

    Open questions at the time
    • Direct molecular mechanism linking PTMA to SMAD4 not defined
    • Single lab, single primary cell type
    • No physical interaction with a TGFβ pathway component shown
  2. 2021 Medium

    Showed that secreted/macrophage-derived phosphorylated PTMA has an extracellular bioactivity, identifying it as a host factor that drives Candida albicans hyphal filamentation.

    Evidence Bioactivity-guided fractionation with mass spectrometry, immunoneutralization, and enzymatic treatment in a C. albicans filamentation assay

    PMID:34433036

    Open questions at the time
    • Fungal receptor or target of PTMA unidentified
    • Phosphosite responsible for activity not mapped
    • Physiological relevance in vivo not established
  3. 2023 Medium

    Defined a PTMA–HMGB1 interaction controlling mitochondrial oxidative phosphorylation, linking PTMA to redox and apoptotic balance in cancer cells.

    Evidence Reciprocal co-IP, immunofluorescence, siRNA knockdown with HMGB1 overexpression rescue, and multiple mitochondrial/ROS assays in ESCC cells

    PMID:37065565

    Open questions at the time
    • Mechanism by which the PTMA–HMGB1 complex regulates OXPHOS unresolved
    • Subcellular site of interaction not localized
    • Single lab
  4. 2025 High

    Resolved a nuclear mechanism for PTMA as a linker histone chaperone, answering how H1.0 is displaced from damaged chromatin to permit PARP1 recruitment.

    Evidence Photoconvertible H1.0 live-cell imaging, Ptma-/- and Parp1-/- cells, dominant tight-binding H1.0 mutant, and DNA damage sensitivity assays

    PMID:40474236

    Open questions at the time
    • Structural basis of PTMA–H1.0 chaperoning not solved
    • Whether PTMA acts directly on H1 variants beyond H1.0 untested
    • Order/coupling of H1 release and PARP1 loading not fully dissected
  5. 2025 High

    Connected PTMA to a chromatin-modifying transcriptional circuit, showing it inhibits NuRD deacetylase activity via MBD3 to amplify STAT3 signaling and drive cardiomyocyte proliferation.

    Evidence Co-IP, cardiomyocyte conditional knockout, AAV9 overexpression, and epistasis across mouse, rat, and human iPSC-derived cardiomyocytes

    PMID:40408476

    Open questions at the time
    • How PTMA binding inhibits HDAC1 catalysis mechanistically unclear
    • Whether the NuRD-STAT3 axis operates outside cardiomyocytes untested
  6. 2026 High

    Identified a mitochondrial genome-protective role for PTMA via TFAM that sustains CD8 T cell oxidative metabolism and immunotherapy response, placing it downstream of TCF1.

    Evidence T cell-specific Ptma deletion, transcriptomics, PTMA-TFAM interaction studies, OXPHOS assays, and in vivo tumor models with PD-1 blockade

    PMID:41544148

    Open questions at the time
    • Structural/biochemical basis of PTMA–TFAM interaction not defined
    • How a predominantly nuclear protein accesses the mitochondrial matrix unresolved
    • Relationship between this TFAM role and the HMGB1-OXPHOS role unexplored

Open questions

Synthesis pass · forward-looking unresolved questions
  • How PTMA's distinct nuclear (H1.0/NuRD) and mitochondrial (TFAM/HMGB1) activities are coordinated, and what governs its partitioning between compartments and partners, remains unresolved.
  • No unifying structural model across binding partners
  • Determinants of subcellular targeting unknown
  • Post-translational regulation (e.g., phosphorylation) linking functions uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 2 GO:0042393 histone binding 1 GO:0044183 protein folding chaperone 1
Localization
GO:0005634 nucleus 2 GO:0005739 mitochondrion 2
Pathway
R-HSA-1430728 Metabolism 2 R-HSA-168256 Immune System 1 R-HSA-4839726 Chromatin organization 1 R-HSA-73894 DNA Repair 1

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2025 PTMA interacts with MBD3, inhibiting its deacetylation activity within the MBD3/HDAC1 NuRD complex. This inhibition increases STAT3 acetylation, which in turn promotes STAT3 phosphorylation and activation of its target genes, thereby driving cardiomyocyte proliferation. Co-immunoprecipitation, conditional knockout in cardiomyocytes, AAV9-mediated overexpression, overexpression in primary mouse/rat and human iPSC-derived cardiomyocytes with proliferation readouts Science advances High 40408476
2025 PTMA functions as a linker histone chaperone that promotes release of histone H1.0 from chromatin at sites of DNA damage, and is required for efficient recruitment of PARP1 to damaged DNA. PTMA-null (Ptma-/-) cells show impaired H1.0 exit from damaged chromatin and fail to efficiently recruit PARP1, resulting in increased sensitivity to DNA-damaging agents. Photoconvertible fluorescent protein tagging of H1.0 with live-cell imaging, stable Ptma-/- cell lines (homozygous null), Parp1-/- cells, overexpression of H1.0 mutant with tight chromatin binding, DNA damage sensitivity assays Epigenetics & chromatin High 40474236
2026 PTMA preserves mitochondrial DNA integrity in CD8 T cells through direct interaction with mitochondrial transcription factor A (TFAM), sustaining oxidative phosphorylation under metabolic stress. PTMA expression in T cells is transcriptionally controlled by TCF1. Genetic deletion of Ptma from T cells impairs CD8 T cell persistence in tumors and abolishes the therapeutic effect of PD-1 blockade. Genetic deletion of Ptma in T cells, transcriptome analysis, protein interaction studies (PTMA-TFAM), metabolic assays (oxidative phosphorylation), in vivo tumor models with PD-1 blockade Science immunology High 41544148
2023 PTMA binds to HMGB1 (detected by co-immunoprecipitation and immunofluorescence). Knockdown of PTMA in ESCC cells inhibits mitochondrial oxidative phosphorylation, induces ROS accumulation, and increases apoptosis; overexpression of HMGB1 rescues these effects, indicating that PTMA–HMGB1 interaction regulates mitochondrial oxidative phosphorylation. Co-immunoprecipitation, immunofluorescence, siRNA knockdown, HMGB1 overexpression rescue, ROS assay (DCFH-DA), MitoSOX, JC-1, mitochondrial complex activity assays, Western blot Journal of thoracic disease Medium 37065565
2017 In a TGFβ1-induced fibrosis model of primary human oral submucous fibroblasts, PTMA knockdown reverses TGFβ1-induced fibrosis by inhibiting fibroblast proliferation and reducing Collagen I, α-SMA, and MMP9 protein levels while increasing SMAD4 levels; PTMA overexpression enhances TGFβ1-induced fibrosis. This places PTMA downstream of TGFβ1 and upstream of SMAD4-mediated ECM regulation. siRNA knockdown and overexpression in primary human oral submucous fibroblasts, CCK-8 proliferation assay, Western blot for ECM markers, TGFβ1-induced fibrosis model Oncotarget Medium 29088825
2021 Macrophage-derived PTMA induces hyphal filamentation in Candida albicans. Bioactivity-guided fractionation coupled to mass spectrometry identified PTMA as the active component; immunoneutralization of PTMA within macrophage lysate abolished its filamentation-inducing activity, and enzymatic treatment implicated phosphorylated protein as responsible. Bioactivity-guided fractionation, mass spectrometry, immunoneutralization with anti-PTMA antibody, enzymatic treatment of lysate, C. albicans filamentation assay Cell reports Medium 34433036

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2020 Circular RNA hsa_circ_0004277 contributes to malignant phenotype of colorectal cancer by sponging miR-512-5p to upregulate the expression of PTMA. Journal of cellular physiology 34 31960446
2019 Identification of prothymosin alpha (PTMA) as a biomarker for esophageal squamous cell carcinoma (ESCC) by label-free quantitative proteomics and Quantitative Dot Blot (QDB). Clinical proteomics 32 30988666
2023 The simultaneous administration of microplastics and cadmium alters rat testicular activity and changes the expression of PTMA, DAAM1 and PREP. Frontiers in cell and developmental biology 25 36968197
2021 The macrophage-derived protein PTMA induces filamentation of the human fungal pathogen Candida albicans. Cell reports 16 34433036
2017 PTMA, a new identified autoantigen for oral submucous fibrosis, regulates oral submucous fibroblast proliferation and extracellular matrix. Oncotarget 9 29088825
2025 PTMA controls cardiomyocyte proliferation and cardiac repair by enhancing STAT3 acetylation. Science advances 8 40408476
2023 Multimodal investigation of electronic transport in PTMA and its impact on organic radical battery performance. Scientific reports 8 37414786
2023 PTMA binds to HMGB1 to regulate mitochondrial oxidative phosphorylation and thus affect the malignant progression of esophageal squamous cell carcinoma. Journal of thoracic disease 5 37065565
2025 The linker histone chaperone Prothymosin α (PTMA) is essential for efficient DNA damage repair and the recruitment of PARP1. Epigenetics & chromatin 4 40474236
2023 Practical Cell Design for PTMA-Based Organic Batteries: an Experimental and Modeling Study. ACS applied materials & interfaces 3 37852614
2026 PTMA safeguards mitochondrial integrity to sustain metabolic function and antitumor activity of CD8 T cells. Science immunology 1 41544148
2025 The Complicity of DAAM1, PTMA, RSPH6A, and Steroidogenic Genes in the Fertility of Male Rats Exposed to Cadmium During Gestation and Lactation: Attenuation by PREOG. Reproductive sciences (Thousand Oaks, Calif.) 0 40629240

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