Affinage

POLR2J

DNA-directed RNA polymerase II subunit RPB11-a · UniProt P52435

Length
117 aa
Mass
13.3 kDa
Annotated
2026-06-10
9 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

POLR2J (hRPB14/RPB11) is an essential subunit of RNA polymerase II that participates in assembly of the polymerase core through subunit–subunit interactions (PMID:8508029). It heterodimerizes with RPB3, an interaction mediated in human cells primarily through a conserved N-terminal alpha-motif; this contrasts with yeast RPB11, where the C-terminal region is critical, and the divergence allows multiple human RPB11 variants to dimerize with RPB3 with equivalent efficiency (PMID:15987790). The C-terminal region also mediates a functional link to the transcriptional machinery, as the Mediator subunit Med18/Srb5 acts as a multicopy suppressor of a C-terminal point mutation in the RPB11 ortholog, connecting the polymerase core to the Mediator complex (PMID:19928061). Beyond its core transcriptional role, POLR2J interacts with STAT3 and supports cancer cell survival: its knockdown suppresses proliferation, induces cell cycle arrest and the unfolded protein response, and sensitizes cells to apoptosis (PMID:38859843), and in lung adenocarcinoma it sustains a STAT3–GPX4 signaling axis that limits ROS, DNA damage, and ferroptosis (PMID:42063717).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 1993 Medium

    Established that the POLR2J ortholog is an indispensable RNA polymerase II subunit and localized its assembly function to a conserved segment shared across RNA polymerase families, defining it as a subunit–subunit interaction module.

    Evidence Gene isolation, essentiality testing, and mutational mapping of assembly-defective alleles in yeast RPB11

    PMID:8508029

    Open questions at the time
    • Does not resolve the direct binding partner of the conserved segment within the polymerase
    • No structural model of the assembly interface
  2. 1994 Low

    Extended the conserved-motif concept to human POLR2J and predicted a heterodimer with RPB3 analogous to the bacterial alpha homodimer, framing how the human subunit fits into polymerase architecture.

    Evidence cDNA cloning and comparative sequence/motif analysis of human hRPB14

    PMID:8056345

    Open questions at the time
    • Sequence comparison only; no biochemical demonstration of the predicted heterodimer
    • Functional consequence of the motif not tested
  3. 2005 High

    Resolved how POLR2J contacts RPB3 and showed the human heterodimerization interface diverged from yeast, explaining why multiple human RPB11 variants can pair with RPB3.

    Evidence Yeast two-hybrid and in vitro heterodimerization assays with C-terminal truncations and N-terminal alpha-motif mutants, comparing yeast and human subunits

    PMID:15987790

    Open questions at the time
    • Functional consequence of variant heterodimers within assembled polymerase not established
    • No structure of the human RPB3/RPB11 dimer
  4. 2009 Medium

    Connected the C-terminal region of the POLR2J ortholog to the Mediator complex, linking core polymerase architecture to transcriptional regulation.

    Evidence Multicopy suppressor screen in yeast identifying Med18/Srb5 as a suppressor of an RPB11 L111A point mutation

    PMID:19928061

    Open questions at the time
    • Genetic suppression does not demonstrate direct physical contact between RPB11 and Med18
    • Human relevance not tested
  5. 2011 Low

    Raised the possibility that a minor human POLR2J isoform couples transcription to translation initiation via contacts with eIF3 subunits.

    Evidence Yeast two-hybrid detection of interactions between hRPB11cα and eIF3a, eIF3i, and eIF3m, with eIF3m localization analysis

    PMID:22022972

    Open questions at the time
    • Single-method (yeast two-hybrid) with no biochemical validation of direct interaction
    • Functional role of the isoform-eIF3 link untested
  6. 2024 Medium

    Implicated POLR2J in cancer cell survival beyond its transcriptional role, identifying a STAT3 interaction and showing that its loss arrests the cell cycle and triggers stress responses.

    Evidence Co-immunoprecipitation with STAT3 plus siRNA knockdown with proliferation, migration, apoptosis, cell cycle, and UPR readouts in glioblastoma cells

    PMID:38859843

    Open questions at the time
    • Co-IP does not establish a direct or reciprocally validated STAT3 interaction
    • Mechanism linking transcriptional subunit function to STAT3 signaling unclear
  7. 2026 Medium

    Defined a POLR2J–STAT3–GPX4 axis controlling redox balance and ferroptosis, providing a survival mechanism in lung adenocarcinoma.

    Evidence siRNA knockdown/overexpression, ROS assay, Western blotting, transcriptomics, and IL-6 rescue of p-STAT3 in lung adenocarcinoma cells

    PMID:42063717

    Open questions at the time
    • No direct binding assay for the POLR2J–STAT3 interaction
    • Whether the axis reflects POLR2J's core transcriptional function or a separate activity is unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unresolved how POLR2J's essential role in RNA polymerase II assembly mechanistically connects to the STAT3–GPX4 survival axis observed in cancer cells.
  • No structural model of the human polymerase incorporating POLR2J variants
  • Direct physical basis of the STAT3 interaction not defined
  • Causal link between transcriptional and ferroptosis-suppressing functions unestablished

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2
Localization
GO:0005634 nucleus 1
Pathway
R-HSA-74160 Gene expression (Transcription) 2
Partners
Complex memberships
RNA polymerase II

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1993 Yeast RPB11 (ortholog of human POLR2J) is an essential subunit of RNA polymerase II; it shares a conserved 19-amino-acid segment with RNA polymerase I/III subunit AC19 and bacterial RNA polymerase alpha subunit; mutations affecting RNA polymerase assembly map within this segment, implicating it in subunit–subunit interactions. Gene isolation, sequence analysis, genetic essentiality testing, and mutational mapping Gene expression Medium 8508029
1994 Human POLR2J (hRPB14) contains a conserved 19-amino-acid N-terminal motif shared with other RNA polymerase subunits and the bacterial alpha subunit; this motif is implicated in subunit assembly, and POLR2J is proposed to form a heterodimer with hRPB33 (RPB3) analogous to the bacterial alpha homodimer. cDNA cloning, amino acid sequence comparison, motif conservation analysis Gene Low 8056345
2005 Human POLR2J heterodimerizes with RPB3 primarily through conserved N-terminal alpha-motif interactions, whereas the yeast RPB3/RPB11 heterodimer critically requires the C-terminal region of RPB11; this divergence in heterodimerization interface allows multiple human RPB11 variants (including POLR2J) to dimerize with equivalent efficiency with RPB3. Yeast two-hybrid and in vitro heterodimerization assays comparing yeast and human subunit combinations with C-terminal truncations and N-terminal alpha-motif mutations Nucleic acids research High 15987790
2009 In yeast, the Med18 (Srb5) subunit of the Mediator complex was identified as a multicopy suppressor of the Leu111Ala point mutation in the C-terminal region of RPB11 (POLR2J ortholog), establishing a functional interaction between the Mediator complex and the RNA polymerase II core via the C-terminal region of RPB11. Multicopy suppressor screen; point mutation (L111A) complementation with SRB5/Med18 overexpression Bioorganicheskaia khimiia Medium 19928061
2011 A minor isoform of human POLR2J (hRPB11cα) interacts with three subunits of translation initiation factor eIF3 (eIF3a, eIF3i, and eIF3m) as detected by yeast two-hybrid, suggesting a role in coupling transcription to downstream mRNA processing/transport steps. Yeast two-hybrid (YTH) system; subcellular localization of eIF3m isoforms Biochemistry. Biokhimiia Low 22022972
2024 POLR2J interacts with STAT3 in glioblastoma cells and this interaction promotes metastatic potential; POLR2J knockdown inhibits cell proliferation, induces G1/S cell cycle arrest, activates the unfolded protein response (UPR), and enhances sensitivity to vorinostat-induced apoptosis. Co-immunoprecipitation (interaction with STAT3), siRNA knockdown, cell proliferation/apoptosis/migration assays, cell cycle analysis American journal of cancer research Medium 38859843
2026 POLR2J knockdown in lung adenocarcinoma cells suppresses cell proliferation, increases ROS production and DNA damage response (DDR), decreases STAT3 phosphorylation and GPX4 expression, and promotes ferroptosis; IL-6 treatment reverses knockdown-mediated inhibition of p-STAT3/STAT3, implicating a POLR2J–STAT3–GPX4 signaling axis. siRNA knockdown and overexpression, MTT/colony formation assays, ROS assay, Western blotting, transcriptomic analysis, IL-6 rescue experiment Frontiers in oncology Medium 42063717

Source papers

Stage 0 corpus · 9 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1993 Yeast RNA polymerase II subunit RPB11 is related to a subunit shared by RNA polymerase I and III. Gene expression 43 8508029
1994 Human RNA polymerase II subunit hRPB14 is homologous to yeast RNA polymerase I, II, and III subunits (AC19 and RPB11) and is similar to a portion of the bacterial RNA polymerase alpha subunit. Gene 30 8056345
2005 Distinct regions of RPB11 are required for heterodimerization with RPB3 in human and yeast RNA polymerase II. Nucleic acids research 14 15987790
2011 A minor isoform of the human RNA polymerase II subunit hRPB11 (POLR2J) interacts with several components of the translation initiation factor eIF3. Biochemistry. Biokhimiia 12 22022972
2014 Measurement of mRNA decay rates in Saccharomyces cerevisiae using rpb1-1 strains. Journal of visualized experiments : JoVE 10 25549102
2024 POLR2J expression promotes glioblastoma malignancy by regulating oxidative stress and the STAT3 signaling pathway. American journal of cancer research 6 38859843
2009 [The functional interaction of an RNA polymerase II Rpb11 subunit with the Med18 subunit (Srb5) of the Saccharomyces cerevisiae mediator complex]. Bioorganicheskaia khimiia 4 19928061
2010 [PSM2 and POLR2J gene families as molecular markers of the higher primate evolution]. Genetika 3 21061629
2026 POLR2J knockdown promotes ROS-induced DDR and ferroptosis by inhibiting the STAT3-GPX4 signaling axis in LUAD. Frontiers in oncology 0 42063717

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