| 1997 |
SUMO-1 (small ubiquitin-related modifier) conjugation of RanGAP1 is required for its association with RanBP2 at the cytoplasmic periphery of the nuclear pore complex; antibodies against NPC-associated RanGAP1 inhibit nuclear protein import in a manner that cannot be rescued by soluble cytosolic RanGAP1, indicating that GTP hydrolysis by Ran at RanBP2 is required for nuclear protein import. |
Immunofluorescence microscopy, antibody inhibition of nuclear import, biochemical pulldown |
Cell |
High |
9019411
|
| 1995 |
Nup358/RanBP2 localizes to the cytoplasmic fibers of the nuclear pore complex and contains four Ran-GTP binding domains, zinc finger motifs, FG/FXFG repeats, and a cyclophilin A homologous domain; immunogold electron microscopy sublocalized it at the tip of cytoplasmic NPC fibers. |
Immunofluorescence microscopy, immunogold electron microscopy, cDNA cloning and sequence analysis |
The Journal of biological chemistry |
High |
7775481
|
| 2002 |
RanBP2/Nup358 functions as a SUMO1 E3 ligase: it directly interacts with the E2 enzyme Ubc9 and strongly enhances SUMO1-transfer from Ubc9 to Sp100. The E3-like activity resides in a 33 kDa domain lacking RING finger motifs, distinct from PIAS family E3 ligases. |
In vitro SUMOylation assays, co-immunoprecipitation, domain mapping |
Cell |
High |
11792325
|
| 2005 |
Crystal structure at 3.0 Å of the four-protein complex of Ubc9, RanBP2 E3 ligase domain (IR1-M), and SUMO-1 conjugated to RanGAP1 C-terminal domain reveals that RanBP2 acts as an E3 by binding both SUMO and Ubc9 to position the SUMO-E2-thioester in an optimal orientation for conjugation. |
X-ray crystallography, biochemical kinetic assays, mutagenesis |
Nature |
High |
15931224
|
| 2004 |
RanBP2's 30 kDa catalytic fragment is a largely unstructured protein that binds Ubc9 in a 1:1 stoichiometry via hydrophobic interactions at nine RanBP2 and three Ubc9 side chains; two partially overlapping 79-residue catalytic domains within RanBP2 are sufficient for maximal E3 activity, distinguishing RanBP2 from all HECT- and RING-type E3 ligases. |
Biochemical mutagenesis, stoichiometry analysis, in vitro SUMOylation assays, structural characterization |
Nature structural & molecular biology |
High |
15378033
|
| 2004 |
NMR chemical shift perturbation identified that RanBP2 binds to the beta-sheet of Ubc9 (unlike canonical ubiquitin E2-E3 interactions). RanBP2 contains a binding site specific for SUMO-1 but not SUMO-2, enabling SUMO paralog-selective conjugation; mutational disruption of Ubc9-RanBP2 binding affected SUMO-2 but not SUMO-1 conjugation to Sp100 and PML. |
NMR chemical shift perturbation, mutagenesis, in vitro SUMOylation assays |
Nature structural & molecular biology |
High |
15608651
|
| 2012 |
Cellular RanBP2 is quantitatively associated with RanGAP1*SUMO1/Ubc9, forming a composite multisubunit SUMO E3 ligase complex. Biochemical reconstitution showed the complex has activity on Borealin that is not present in free RanBP2; complex formation induces activation of a catalytic site absent in free RanBP2. |
Biochemical reconstitution, in vitro SUMOylation assays, co-immunoprecipitation, quantitative proteomics |
Molecular cell |
High |
22464730
|
| 2008 |
RanBP2 sumoylates Topoisomerase IIα (Topo IIα) during mitosis; this SUMO modification is required for Topo IIα localization to inner centromeres. Mice with low RanBP2 develop aneuploidy with anaphase bridge formation due to failure of Topo IIα to accumulate at inner centromeres, in the absence of overt transport defects. |
Conditional hypomorphic mouse model, immunofluorescence, in vitro SUMOylation assays, cytogenetic analysis |
Cell |
High |
18394993
|
| 2002 |
RanBP2 catalyzes SUMO-1 modification of HDAC4 at the nuclear pore complex; HDAC4 sumoylation depends on its ability to self-aggregate and on an intact nuclear localization signal, and is coupled to nuclear import. A sumoylation-deficient HDAC4-K559R mutant shows reduced transcriptional repression and histone deacetylase activity. |
Co-transfection, mutagenesis, in vitro SUMOylation assays, immunofluorescence |
The EMBO journal |
High |
12032081
|
| 1997 |
RanBP2 forms a stable complex with modified RanGAP1 (SUMO-conjugated) and Ubc9p (Xenopus homolog of E2 ubiquitin-conjugating enzyme); the complex retains GTPase-activating protein activity, indicating RanGAP1 is not inactivated by SUMO modification. |
Immunoprecipitation, RanGAP activity assays, cDNA cloning |
Proceedings of the National Academy of Sciences of the United States of America |
High |
9108047
|
| 1998 |
Ubc9p (Xenopus homolog) acts as an E2-like enzyme for SUMO-1 conjugation but not ubiquitin conjugation, and interacts specifically with the internal repeat domain of RanBP2, which is itself a substrate for SUMO-1 conjugation in Xenopus egg extracts. |
In vitro conjugation assays, co-immunoprecipitation, domain mapping |
Current biology : CB |
High |
9427648
|
| 2004 |
RanGAP1–RanBP2 complex is required for microtubule-kinetochore interactions in mitosis; RanBP2 depletion causes mislocalization of RanGAP1, Mad1, Mad2, CENP-E, and CENP-F and loss of cold-stable kinetochore-MT interactions. RanGAP1 and RanBP2 are targeted to kinetochores as a single complex dependent on Hec1/Ndc80 and Nuf2 (but not CENP-I, Bub1, or CENP-E). |
siRNA depletion, immunofluorescence, co-immunoprecipitation, live cell imaging |
Current biology : CB |
High |
15062103
|
| 2003 |
Nup358/RanBP2 is essential for kinetochore function; siRNA-mediated depletion of Nup358 severely perturbs chromosome congression and segregation and inhibits the assembly of other kinetochore components, leading to aberrant kinetochore structure. |
siRNA depletion, live cell imaging, immunofluorescence microscopy |
The Journal of cell biology |
High |
12963708
|
| 1997 |
RanGTP specifically promotes binding of p97 (importin beta) to RanBP2, whereas it inhibits p97 binding to other FG repeat nucleoporins; purified RanBP2 forms a flexible ~36 nm filamentous molecule constituting cytoplasmic fibrils of the NPC. |
Biochemical purification from rat liver nuclear envelopes, in vitro binding assays, electron microscopy |
Molecular biology of the cell |
High |
9398662
|
| 2004 |
Nup88 and Nup214/CAN mediate the attachment of Nup358/RanBP2 to the NPC; RNAi of Nup88 or Nup214 causes strong reduction of Nup358 at the nuclear envelope. Nup358 depletion reduces CRM1 localization at the cytoplasmic NPC face and causes a distinct reduction in NES-dependent nuclear export. |
RNA interference, immunofluorescence, co-immunoprecipitation, nuclear export assays |
Molecular and cellular biology |
High |
14993277
|
| 2004 |
RanBP2/Nup358 provides a major binding site for NXF1-p15 heterodimers at the cytoplasmic NPC filaments; RanBP2 depletion in Drosophila cells inhibits mRNA export and causes release of NXF1 into the cytoplasm, reducing its nuclear levels, while CRM1-mediated protein export is unaffected. |
RNAi in Drosophila cells, mRNA export assays, immunofluorescence, in vitro binding assays |
Molecular and cellular biology |
High |
14729961
|
| 1996 |
The RBD4 and cyclophilin domains of RanBP2 act in concert as a chaperone for red/green opsin: RBD4 binds opsin and the cyclophilin domain augments and stabilizes this interaction, possibly through proline isomerization of the opsin substrate, unlike Drosophila NinaA which forms a stable complex with opsin. |
In vitro binding assays, domain deletion analysis |
Nature |
High |
8857542
|
| 2001 |
A novel kinesin-binding domain (KBD) of RanBP2, located between RBD2 and RBD3, associates selectively and directly with kinesin motors KIF5B and KIF5C but not KIF5A in the CNS; kinesin light chain and RanGTPase are also part of this macroassembly complex. |
In vitro pulldown, co-immunoprecipitation, domain mapping |
The Journal of biological chemistry |
High |
11553612
|
| 2007 |
The kinesin-binding domain (KBD) of RanBP2 associates selectively and directly with KIF5B and KIF5C via a ~100-residue segment including a leucine-like heptad motif; a single residue conserved in KIF5B/C but not KIF5A confers isotype-specific binding. Selective inhibition of KBD-KIF5B/C interaction causes perinuclear clustering of mitochondria, deficits in mitochondrial membrane potential, and cell shrinkage. |
In vitro binding assays with purified proteins, mutagenesis, cell-based functional assays, mitochondrial membrane potential measurements |
Traffic (Copenhagen, Denmark) |
High |
17887960
|
| 2009 |
RanBP2 is the first known allosteric activator of kinesin-1 (KIF5B): the KBD with flanking RBD2/RBD3 domains activates KIF5B ATPase activity ~30-fold in the presence of microtubules and ATP in a biphasic, highly cooperative manner. Deletion of one RBD lowers activation 3-fold and abolishes cooperativity. |
In vitro ATPase assay with purified components, domain deletion analysis |
EMBO reports |
High |
19305391
|
| 1999 |
The zinc finger cluster domain of RanBP2 constitutes a specific docking site for exportin-1/CRM1 during nuclear export; this interaction is insensitive to leptomycin B and to the nucleotide-bound state of Ran-GTPase, unlike Ran's interaction with the RanBP2-exportin-1 complex. |
In vitro binding assays, domain mapping, leptomycin B treatment |
The Journal of biological chemistry |
Medium |
10601307
|
| 1999 |
Karyopherin beta1 (importin beta) binds RanBP1-homologous (RBH) domains of Nup358 in the presence of either RanGTP or RanGDP; a classical NLS peptide bound to the Kapbeta1-RanGTP-RBH complex stimulates GTP hydrolysis by RanGAP1, linking termination of one import cycle with initiation of the next. |
In vitro binding assays, GTPase activity assays, ultrastructural analysis, permeabilized cell import assays |
The Journal of biological chemistry |
High |
10473610
|
| 2011 |
RanGTP-importin-β binding to the Ran-binding domain (RBD) of RanBP2 at cytoplasmic fibrils is required for cNLS-mediated protein import and cell viability. Conditional knockout of RanBP2 in MEFs causes cell death with defects in M9- and cNLS-mediated import, NES-mediated export, and mRNA export; an N-terminal RanBP2 fragment with the NPC-binding domain, three FG motifs, and one RBD rescues all transport defects and viability. |
Conditional knockout mouse embryonic fibroblasts, Cre-mediated inactivation, nuclear transport assays, mutant rescue analysis |
The Journal of cell biology |
High |
21859863
|
| 2008 |
The Nup358-RanGAP1 complex has a dual function in nuclear import: it coordinates importin beta recycling and reformation of novel import complexes. Depletion of Nup358 reduces importin alpha/beta-dependent nuclear import; overexpression of importin beta rescues import in Nup358-depleted cells, demonstrating importin beta is rate-limiting. |
RNAi, in vitro transport assays, antibody inhibition, overexpression rescue |
Molecular biology of the cell |
High |
18305100
|
| 2006 |
RanBP2 associates in vitro and in vivo with the mitochondrial metallochaperone Cox11 and hexokinase type I (HKI) via its leucine-rich domain; the leucine-rich domain has chaperone activity toward Cox11. Cox11 inhibits HKI, and RanBP2 suppresses this inhibitory activity. RanBP2 haploinsufficiency in mice decreases HKI and ATP levels selectively in the CNS. |
In vitro binding assays, co-immunoprecipitation, enzyme activity assays, mouse genetic model |
PLoS genetics |
High |
17069463
|
| 2008 |
RanBP2 promotes SUMO2/3 modification of Borealin (a chromosomal passenger complex component) during mitosis; RanBP2 interacts with the CPC and stimulates Borealin SUMOylation in vitro. SENP3 catalyzes deconjugation of SUMO2/3 from Borealin, constituting a mitotic conjugation-deconjugation cycle. |
Co-immunoprecipitation, in vitro SUMOylation assays, siRNA depletion, cell synchronization |
Molecular biology of the cell |
High |
18946085
|
| 2016 |
The RanBP2/RanGAP1*SUMO1/Ubc9 complex functions as an autonomous disassembly machine for Crm1 export complexes: three in vitro reconstituted intermediates show binding of Crm1 export complexes via two FG-repeat patches, cargo release by RanBP2's Ran-binding domains, and retention of free Crm1 at RanBP2 after Ran-GTP hydrolysis. |
In vitro reconstitution of disassembly intermediates, biochemical fractionation, pulldown assays |
Nature communications |
High |
27160050
|
| 2013 |
The cyclophilin domain of NUP358 is an active prolyl isomerase that catalyzes cis-trans isomerization of the HIV-1 capsid at residue P90; crystal structure of the N-terminal HIV-1 capsid domain complexed with the NUP358 cyclophilin domain shows positioning allowing single-bond resonance stabilization of P90. |
X-ray crystallography, NMR exchange experiments, in vitro isomerization assays |
Retrovirology |
High |
23902822
|
| 2013 |
Crystal structure of the C-terminal domain (CTD) of Nup358 at 1.75 Å reveals a cyclophilin-like fold with a non-canonical active-site configuration possessing weak peptidyl-prolyl isomerase activity; the active-site cavity mediates weak association with HIV-1 capsid. The CTD is dispensable for nuclear envelope localization of Nup358. |
X-ray crystallography, biochemical PPIase assays, localization assays |
Journal of molecular biology |
High |
23353830
|
| 2012 |
Crystal structure of the Nup358 N-terminal domain (NTD) at 0.95 Å reveals an α-helical domain with three central tetratricopeptide repeats (TPRs) adopting an extended conformation lacking the canonical peptide-binding groove; the NTD possesses positively charged surface and can bind single-stranded RNA. |
X-ray crystallography, RNA binding assays |
Journal of molecular biology |
High |
22959972
|
| 2011 |
RanBP2 is required for transportin-mediated nuclear import; Nup358 depletion strongly inhibits nuclear import of HIV-1 Rev and other transportin-dependent cargoes; overexpression of transportin rescues import in Nup358-depleted cells, demonstrating that transportin becomes rate-limiting. |
siRNA depletion, nuclear import assays, overexpression rescue in HeLa cells |
Journal of cell science |
High |
19299463
|
| 2004 |
RanGAP1*SUMO1 is phosphorylated at T409, S428, and S442 by cyclin B/Cdk1 before nuclear envelope breakdown and remains associated with RanBP2/Nup358 and Ubc9 throughout mitosis, suggesting mitotic phosphorylation may regulate the RanGTPase cycle and/or RanBP2-dependent SUMOylation. |
Mass spectrometry, in vitro kinase assay, co-immunoprecipitation, cell synchronization |
The Journal of cell biology |
High |
15037602
|
| 2002 |
RanBP2 sumoylates Mdm2; in vitro, RanBP2 catalyzes SUMO modification of Mdm2 at the nuclear pore during nuclear translocation. The K182R Mdm2 mutant, which localizes exclusively to the cytoplasm, is not sumoylated in intact cells but can be sumoylated in vitro, consistent with RanBP2 sumoylating Mdm2 during nuclear import. |
In vitro SUMOylation assays, mutagenesis, co-transfection, immunofluorescence |
The Journal of biological chemistry |
Medium |
12393906
|
| 2011 |
Nup358/RanBP2 directly interacts with zinc finger repeats to bind ALREX-promoting RNA elements in mRNAs encoding secretory proteins; Nup358 is required for stimulated translation of these mRNAs and for efficient global synthesis of proteins targeted to the ER and mitochondria. |
RNA binding assays, siRNA depletion, polysome/translation assays |
PLoS biology |
Medium |
23630457
|
| 2011 |
RanBP2 directly interacts with the zinc fingers (ZNFs) to bind and tether Epac1 (a cAMP-regulated GEF for Rap) to the NPC; RanBP2 inhibits the catalytic CDC25 homology domain of Epac1 in vitro. RanBP2 depletion releases Epac1 from the NPC and enhances cAMP-induced Rap activation and cell adhesion. Phosphorylation of RanBP2 ZNFs also releases Epac1. |
Co-immunoprecipitation, in vitro GEF activity assay, siRNA depletion, phosphorylation analysis |
The Journal of cell biology |
High |
21670213
|
| 2005 |
Parkin (E3 ubiquitin ligase) selectively binds RanBP2 and ubiquitinates it, promoting proteasomal degradation of RanBP2. Parkin also controls intracellular levels of sumoylated HDAC4 as a downstream consequence of RanBP2 ubiquitination. |
Co-immunoprecipitation, in vitro ubiquitination assay, proteasome inhibitor treatment |
The Journal of biological chemistry |
Medium |
16332688
|
| 2005 |
Depletion of Nup358/RanBP2 by siRNA completely abolishes SUMOylation along the nuclear rim and dislocates RanGAP1 from NPCs; Nup358 depletion also markedly reduces the number of PML bodies, suggesting RanBP2-mediated SUMOylation at the nuclear rim is required for PML body formation. |
In situ SUMOylation assay in semi-intact cells, siRNA knockdown, immunofluorescence |
Experimental cell research |
Medium |
16688858
|
| 2001 |
The IR1+2 domain (129 amino acids) of RanBP2 binds Ubc9 with high affinity in vitro and in vivo; overexpression of GFP-IR1+2 sequesters ~90% of nuclear Ubc9 in the cytoplasm, mislocalizes SUMO-1/2/3 and PML, and prevents Rad51 foci formation, indicating a role of nuclear Ubc9 in Rad51-mediated homologous recombination. |
In vitro binding assays, co-immunoprecipitation, GFP-fusion overexpression, immunofluorescence |
The Journal of biological chemistry |
Medium |
11709548
|
| 2007 |
A fraction of Nup358 interacts with interphase microtubules through its N-terminal region; overexpression of this microtubule-targeting domain causes increased microtubule bundling and stability, and elevated acetylated microtubule levels. RNAi depletion of Nup358 affects polarized microtubule stabilization during directed cell migration. |
Co-sedimentation assay, overexpression, immunofluorescence, RNAi, wound-healing assay |
FEBS letters |
Medium |
18070602
|
| 2004 |
Supraphysiological high-affinity NES peptides bind CRM1 independently of RanGTP and accumulate (arrest) at Nup358 at the cytoplasmic NPC face, providing in vivo evidence that Nup358 is the site of nuclear export complex disassembly. |
Peptide library screen, in vitro CRM1-binding assays, RNA interference, immunofluorescence |
The EMBO journal |
Medium |
15329671
|
| 2005 |
Mass spectrometry (FT-ICR with AI-ECD/IRMPD) identified six in vitro SUMOylation sites in RanBP2 during autoSUMOylation, along with branch-point lysines in SUMO-1 and SUMO-2; all but one site conformed to KxE or KpsiK consensus motifs. |
In vitro SUMOylation assay, Fourier transform ion cyclotron resonance mass spectrometry |
Analytical chemistry |
Medium |
16194093
|
| 2011 |
Nup358 binds AGO proteins through its SUMO-interacting motif (SIM); Nup358 promotes the association of target mRNA with miRISC. Nup358 depletion disrupts P bodies and impairs the miRNA-mediated gene silencing pathway. |
Co-immunoprecipitation, siRNA depletion, pulldown with SIM mutants, P body imaging |
EMBO reports |
Medium |
28039207
|
| 2016 |
RanBP2 mediates SUMO2 modification of the Small Heterodimer Partner (SHP) at K68 upon bile acid signaling; SUMOylated SHP is transported to the nucleus where it interacts with repressive histone modifiers to inhibit bile acid synthetic genes. Mice expressing a SUMO-defective K68R SHP mutant have increased liver bile acid levels and exacerbated cholestatic pathology. |
In vitro SUMOylation assays, co-localization studies, mouse genetic model with K68R mutant, ChIP, gene expression analysis |
Nature communications |
High |
27412403
|
| 2015 |
RanGDP (not RanGTP) is the physiological target for the RanBP2/RanGAP1*SUMO1/Ubc9 complex SUMO E3 ligase activity; transport receptors (Crm1, importin β, Transportin, NTF2) inhibit Ran sumoylation. NTF2 prevents sumoylation by reducing RanGDP's affinity for RanBP2's RBDs to undetectable levels (shown by isothermal titration calorimetry). |
In vitro SUMOylation assay with reconstituted complex, isothermal titration calorimetry, SENP inhibition in semi-permeabilized cells |
The Journal of biological chemistry |
High |
26251516
|
| 2011 |
Nup358 functions as a cargo- and receptor-specific assembly platform for nuclear import; a short N-terminal Nup358 fragment promotes import of DBC-1, while DMAP-1 requires a larger fragment. Neither RanGAP interaction nor SUMO E3 ligase activity is required for import of these cargoes. |
siRNA depletion, nuclear import assays, domain deletion constructs, co-immunoprecipitation |
Traffic (Copenhagen, Denmark) |
Medium |
21995724
|
| 2011 |
β-catenin directly interacts with RanBP2/Nup358 via Armadillo repeats R10-12; knockdown of endogenous Nup358 impedes the rate of nuclear import/export of β-catenin to a greater extent than that of importin-β, and Nup358 interaction is stimulated by phosphorylation at Tyr-654. |
FRAP, in vitro export assays, proteomics, co-immunoprecipitation, siRNA knockdown |
The Journal of biological chemistry |
Medium |
22110128
|
| 2005 |
The zinc finger domain of Nup358, but not a zinc finger from an unrelated protein, binds COPI coatomer and dominantly inhibits nuclear envelope breakdown in an in vitro assay. Nup358-specific antibodies impair nuclear disassembly; individual zinc fingers mediate COPI association, with tandem zinc fingers optimal. |
In vitro nuclear envelope breakdown assay, in vitro COPI binding, antibody inhibition |
Molecular biology of the cell |
Medium |
16314393
|
| 2009 |
Nup358 interacts with the middle region of APC and cooperates with kinesin-2 to regulate APC localization to the cell cortex through a nuclear-transport-independent mechanism; Nup358 RNAi impairs polarized cell migration in scratch-induced wound healing assays. |
Co-immunoprecipitation, ectopic expression, RNAi, wound-healing assay, immunofluorescence |
Journal of cell science |
Medium |
19654215
|
| 2014 |
Importin 7 is the major soluble nuclear transport receptor for hTERT (telomerase protein component); at the NPC, Nup358's zinc finger region is specifically required for nuclear import of hTERT. |
siRNA depletion of import receptors, nuclear import assays, Nup358 domain-deletion constructs |
PloS one |
Medium |
24586428
|
| 2016 |
KIF5B induces relocalization of Nup358 from the nuclear pore into the cytoplasm during HIV-1 infection in a capsid-dependent manner; cytoplasmic Nup358 directly associates with viral cores. This interaction requires both the N74D hydrophobic pocket and the cyclophilin A binding loop (P90A) of capsid. KIF5B knockdown prevents nuclear entry of HIV-1 but not N74D or P90A capsid mutants. |
siRNA depletion, immunofluorescence, co-immunoprecipitation with viral cores, viral infectivity assays |
PLoS pathogens |
Medium |
27327622
|
| 2011 |
Depletion of Nup358/RanBP2 or Transportin-3 alters HIV-1 integration site selection, reducing integration in gene-dense regions and near gene-associated features; this phenotype is phenocopied by HIV-1 containing MLV gag, implicating Gag-dependent engagement of transport/pore machinery in integration targeting. |
siRNA depletion, genome-wide integration site mapping, chimeric virus analysis |
PLoS pathogens |
Medium |
21423673
|
| 2018 |
RanBP2 interacts with GCN5L1 and αTAT1; genetic silencing of RanBP2 reduces α-tubulin acetylation, phenocopying GCN5L1 depletion. RanBP2 possesses a tubulin-binding domain that recruits GCN5L1 to α-tubulin. |
Co-immunoprecipitation, siRNA depletion, tubulin acetylation assays |
Journal of cell science |
Medium |
30333138
|
| 2021 |
The RanBP2/RanGAP1-SUMO nucleocytoplasmic transport hub gates β-arrestin2 (β-arr2) nuclear entry via a non-covalent SUMO-interaction motif (SIM) in β-arr2; depletion of RanBP2/RanGAP1-SUMO levels causes defective β-arr2 nuclear entry. Mutation of the SIM inhibits β-arr2 nuclear import and its ability to delocalize Mdm2 from the nucleus, impairing p53 signaling. |
Co-immunoprecipitation, siRNA depletion, nuclear import assays, mutagenesis, p53 reporter assays |
Oncogene |
Medium |
33649538
|
| 2020 |
SIRT1 activates RANBP2, which catalyzes SUMO modification of FTO at K216, promoting FTO degradation; FTO SUMOylation by RANBP2 is required for SIRT1-mediated reduction of FTO and consequent increase in m6A modifications on downstream targets including GNAO1 mRNA. |
Co-immunoprecipitation, in vitro SUMOylation assays, siRNA depletion, m6A sequencing |
Hepatology (Baltimore, Md.) |
Medium |
32154934
|
| 2022 |
A Nup358 α-helix (residues 2162-2184) undergoes a coil-to-α-helix transition upon binding the dynein adaptor BicD2, forming the core of the Nup358-BicD2 interface; a minimal Nup358 domain activates dynein/dynactin/BicD2 for processive motility on microtubules. Mutations in this region decrease BicD2 interaction, dynein recruitment, and motility. |
NMR titration, CEST-NMR, circular dichroism, mutagenesis, in vitro single-molecule motility assays |
eLife |
High |
35229716
|
| 2011 |
Nup358 depletion in myoblasts suppresses myotube formation without affecting cell viability; the amount of Nup358 within individual NPCs increases during muscle differentiation in C2C12 cells, correlating with structural differences in the cytoplasmic NPC surface detected by atomic force microscopy. |
siRNA depletion, atomic force microscopy, immunofluorescence, Western blot |
The FEBS journal |
Medium |
21205196
|
| 2012 |
Depletion of RanBP2 induces cytoplasmic intermediates of nuclear speckles containing phosphorylated SR proteins in G1 phase, disrupting a late step in sequential nuclear entry of mitotic interchromatin granule components; this imbalanced distribution of phosphorylated and hypophosphorylated SR proteins affects alternative splicing patterns. |
siRNA-based phenotypic screen, immunofluorescence, RT-PCR for alternative splicing |
Molecular biology of the cell |
Medium |
22262462
|
| 2014 |
Conditional ablation of Ranbp2 in RPE cells causes progressive degeneration; genetic complementation analysis showed that selective impairment of RBD2 and RBD3 (Ran-binding domains 2 and 3) binding to Ran-GTP recapitulates RPE degeneration, while rescuing cone photoreceptor degeneration, revealing domain-specific roles of Ranbp2 in different cell types. |
Conditional knockout mouse model, BAC transgenic complementation with domain-specific mutations, electrophysiology, immunohistochemistry |
The Journal of biological chemistry |
High |
25187515
|
| 2014 |
Selective loss of PPIase activity (R2944A mutation) in Ranbp2's cyclophilin domain causes selective deficits in M-opsin biogenesis with accumulation and aggregation in cone photoreceptors, and post-transcriptional down-regulation of hnRNP A2/B1 proteins. Separate chaperone-deficient mutations (CLDm) do not show these effects but abolish SUMO-1 and S1 binding. The two activities are mechanistically separable. |
BAC transgenic mice expressing point-mutant Ranbp2, proteomics, immunofluorescence, electrophysiology |
The Journal of biological chemistry |
High |
24403063
|