Affinage

NSMCE1

Non-structural maintenance of chromosomes element 1 homolog · UniProt Q8WV22

Length
266 aa
Mass
30.9 kDa
Annotated
2026-06-10
9 papers in source corpus 2 papers cited in narrative 4 extracted findings
Cross-family judge vs UniProt: UniProt preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

NSMCE1 is a subunit of the SMC5/6 genome-integrity complex that, together with NSMCE3, forms a subcomplex with antiviral activity against hepatitis B virus (PMID:41825673). The purified NSMCE1/NSMCE3 subcomplex is sufficient to inhibit HBV transcription in a cell-free reporter assay, acting independently of the full holo-complex (PMID:41825673). NSMCE1/NSMCE3 additionally drives degradation of the viral HBx protein through a ubiquitin-independent route: degradation requires proteasome activity but not E1 ubiquitin-activating enzyme function, and the subcomplex physically associates with the 20S proteasome without stimulating HBx ubiquitination (PMID:41825673). Through these combined transcriptional and post-translational effects, NSMCE1/NSMCE3 represses HBx at the mRNA and protein level and restricts HBV proliferation in hepatoma cells, whereas NSMCE3 knockdown enhances viral proliferation (PMID:41825673). In mouse hippocampal neuronal cells, Nsmce1 modulates expression of Alzheimer's disease marker genes and reshapes alternative splicing toward the ubiquitin-mediated proteolysis pathway (PMID:31792732). Beyond these findings, the molecular basis of NSMCE1's contribution to the intact SMC5/6 complex has not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2019 Low

    Established the first cellular phenotype for NSMCE1 outside canonical genome maintenance, linking it to neuronal gene-expression control and splicing regulation.

    Evidence Overexpression and knockdown in HT-22 hippocampal cells with marker-gene qPCR, proliferation assays, and RNA-seq

    PMID:31792732

    Open questions at the time
    • No direct molecular mechanism or pathway placement for the splicing/proteolysis effects
    • AD marker-gene changes are correlative, not mechanistically connected to NSMCE1 activity
    • Single lab, single cell line
  2. 2026 Medium

    Showed that the NSMCE1/NSMCE3 subcomplex alone is sufficient to repress HBV transcription, decoupling this antiviral function from the full SMC5/6 holo-complex.

    Evidence Cell-free transcription assay with purified NSMCE1/3 subcomplex and luciferase reporter

    PMID:41825673

    Open questions at the time
    • In vitro reconstitution only; not validated in chromatinized cellular HBV context
    • Mechanism of transcriptional repression unresolved
    • Single study, single lab
  3. 2026 Medium

    Defined a ubiquitin-independent proteasomal pathway by which NSMCE1/NSMCE3 degrades the viral HBx protein and restricts HBV proliferation.

    Evidence Cycloheximide chase, proteasome and E1 inhibitor treatments, 20S proteasome Co-IP and ubiquitination assays, plus gain/loss-of-function in hepatoma cells

    PMID:41825673

    Open questions at the time
    • Structural basis of NSMCE1/3 binding to the 20S proteasome unknown
    • How HBx is targeted to the proteasome without ubiquitination is unresolved
    • Reciprocal validation of the 20S interaction not described

Open questions

Synthesis pass · forward-looking unresolved questions
  • How NSMCE1's antiviral and proteasome-directing activities relate to its role within the intact SMC5/6 complex and to genome integrity remains unresolved.
  • No structural or biochemical characterization of NSMCE1 within full SMC5/6 in this corpus
  • Connection between neuronal splicing/proteolysis role and antiviral role unestablished
  • No in vivo evidence for the antiviral mechanism

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060089 molecular transducer activity 3
Pathway
R-HSA-1643685 Disease 3
Partners
Complex memberships
NSMCE1/NSMCE3 subcomplexSMC5/6 complex

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2026 The NSMCE1/NSMCE3 subcomplex of SMC5/6 is sufficient to inhibit HBV transcription in vitro, independently of the full holo-complex, as measured by a luciferase reporter in a cell-free expression system with purified subcomplexes. Cell-free transcription assay with purified NSMCE1/3 subcomplex and luciferase reporter International journal of biological macromolecules Medium 41825673
2026 NSMCE1/NSMCE3 overexpression causes degradation of HBx protein via a ubiquitin-independent proteasomal mechanism: the effect is blocked by a proteasome inhibitor but not by an E1 ubiquitin-activating enzyme inhibitor, and NSMCE1/3 interacts with the 20S proteasome without stimulating HBx ubiquitination. Cycloheximide chase, proteasome inhibitor treatment, E1 inhibitor treatment, Co-immunoprecipitation with 20S proteasome, ubiquitination assay International journal of biological macromolecules Medium 41825673
2026 NSMCE1/NSMCE3 represses HBx expression at both the mRNA and protein level, and overexpression of NSMCE1/3 inhibits HBV proliferation in hepatoma cell lines, while knockdown of NSMCE3 promotes HBV proliferation. RT-PCR, cycloheximide chase, overexpression and knockdown in hepatoma cell lines with HBV proliferation readout International journal of biological macromolecules Medium 41825673
2019 Nsmce1 overexpression in mouse hippocampal neuronal cells (HT-22) inhibits expression of AD marker genes App, Bace2, and Mapt, and promotes cell proliferation; knockdown of Nsmce1 has the opposite effects. Nsmce1 overexpression also increases alternative splicing complexity, with events enriched in the ubiquitin-mediated proteolysis pathway. Overexpression and knockdown in HT-22 cells, RT-PCR/qPCR for marker genes, cell proliferation assay, RNA-seq transcriptomics Functional & integrative genomics Low 31792732

Source papers

Stage 0 corpus · 9 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2021 Genome-wide epistasis analysis for Alzheimer's disease and implications for genetic risk prediction. Alzheimer's research & therapy 40 33663605
2022 Role of a lipid metabolism-related lncRNA signature in risk stratification and immune microenvironment for colon cancer. BMC medical genomics 17 36280825
2020 Whole genome sequencing identifies allelic ratio distortion in sperm involving genes related to spermatogenesis in a swine model. DNA research : an international journal for rapid publication of reports on genes and genomes 14 32931559
2023 4D-DIA quantitative proteomics revealed the core mechanism of diabetic retinopathy after berberine treatment. European journal of pharmacology 12 37659689
2021 Identification of hub ubiquitin ligase genes affecting Alzheimer's disease by analyzing transcriptome data from multiple brain regions. Science progress 11 33754896
2019 A transcriptomic analysis of Nsmce1 overexpression in mouse hippocampal neuronal cell by RNA sequencing. Functional & integrative genomics 7 31792732
2024 Novel genomic variants influencing methotrexate delayed clearance in pediatric patients with acute lymphoblastic leukemia. Frontiers in pharmacology 4 39611166
2026 Assessing SMC Complex Function in Replication Fork Progression with DNA Fiber Assays. Methods in molecular biology (Clifton, N.J.) 0 41111109
2026 Mechanism insights into the role of Smc5/6 in HBV inhibition. International journal of biological macromolecules 0 41825673

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