| 1994 |
TR4 (NR2C2) was identified as a member of the steroid receptor superfamily, cloned from human and rat hypothalamus/prostate/testis, encoding a 615 (human) or 596 (rat) amino acid protein with high homology to TR2, establishing TR2 and TR4 as a unique subfamily within the nuclear receptor superfamily. |
cDNA cloning, sequence analysis |
Proceedings of the National Academy of Sciences of the United States of America |
High |
8016112
|
| 1997 |
TR4 binds with high affinity (Kd = 0.066 nM) to a conserved DR1 hormone response element (CNTFR-DR1) in the 5th intron of the CNTFRα gene and induces its enhancer activity in a dose-dependent manner, identifying CNTFRα as the first neural-specific gene transactivated by TR4. |
EMSA, reporter gene (CAT) assay, in situ hybridization |
The Journal of biological chemistry |
Medium |
9006963
|
| 1997 |
TR4 binds DR4-HRE with strong affinity (Kd = 2 nM) and induces transcription from DR4-containing promoters (including rat α-myosin heavy chain and S14), in contrast to its repressive activity on DR1-HRE targets, demonstrating element-dependent bidirectional transcriptional regulation. |
EMSA, Scatchard analysis, CAT reporter assay |
The Journal of biological chemistry |
Medium |
9115296
|
| 1998 |
TR4 represses RA-induced transactivation via a negative feedback mechanism by binding DR1 and DR5 elements (RAR and RXR response elements) with higher affinity than RAR/RXR, and RA treatment increases TR4 mRNA and protein levels in F9 cells, establishing a negative feedback loop. |
EMSA, CAT reporter assay, Western blot, Northern blot |
The Journal of biological chemistry |
Medium |
9593676
|
| 1998 |
TAK1/TR4 binds DR1 response elements as a homodimer with greatest affinity for AGGTCAAAGGTCA, represses PPARα-mediated transactivation by competing with PPARα/RXR for PPRE binding, and also competes with PPARα for the co-activator RIP-140 (shown by two-hybrid analysis); TR4 does not heterodimerize with PPARα or RXRα. |
Site selection analysis, gel shift assay, cell transfection/reporter assay, two-hybrid analysis |
The Journal of biological chemistry |
Medium |
9556573
|
| 1998 |
TR2 and TR4 preferentially form heterodimers in solution and on DR5-containing DNA elements; the dimerization is mediated by the ligand-binding domains with three leucine residues on helix 10 of TR2 being critical; coexpression of TR2 and TR4 exerts stronger repressive activity on DR5-reporter than either receptor alone. |
Yeast two-hybrid, mammalian two-hybrid, pull-down assay, EMSA, GFP intracellular localization tracking, reporter assay |
The Journal of biological chemistry |
High |
9737983
|
| 1998 |
TR4 crosstalks with COUP-TF1 and thyroid hormone receptor (TRα1) to potentiate HIV-LTR transcriptional activity, while TR4 alone has no effect on HIV-LTR; TR2 does not show this crosstalk activity, demonstrating TR4-specific functional interaction with other nuclear receptors. |
Gel retardation assay (EMSA), CAT reporter assay, transient transfection |
Endocrine |
Low |
9704574
|
| 1998 |
TR4 suppresses estrogen receptor-mediated transactivation in bone cells (osteosarcoma cell lines) but not in kidney or breast cancer cells, establishing a bone cell-specific repressor activity of TR4 on ER signaling. |
Transient transfection assay, Northern blot |
Endocrinology |
Low |
9421416
|
| 1998 |
CNTF increases TR4 expression and enhances TR4 DNA-binding capacity; TR2 expression is also induced by CNTF and TR2 induces CNTFRα transcriptional activity via CNTFR-I5 DR element, establishing bidirectional regulation between TR2/TR4 and the CNTF signaling pathway. |
EMSA, reporter assay, in situ hybridization, Western blot |
The Journal of biological chemistry |
Medium |
9694834
|
| 1999 |
TR4 binds DR3VDRE with high affinity (Kd = 1.32 nM) and represses vitamin D3 target gene (25-hydroxyvitamin D3 24-hydroxylase) expression, in contrast to its induction of DR4T3RE target genes; distinct TR4 conformations when bound to DR3VDRE vs. DR4T3RE (shown by antibody supershift and proteolytic analysis) allow recruitment of different coregulators. |
EMSA, cell transfection/reporter assay, antibody supershift, proteolytic analysis |
The Journal of biological chemistry |
Medium |
10347174
|
| 2002 |
TR4 directly interacts with estrogen receptor (ER) via protein-protein interaction, inhibits ER homodimerization, and prevents ER binding to estrogen response elements, resulting in suppression of ER target genes (cyclin D1, pS2) and inhibition of ER-mediated cell proliferation in MCF-7 cells. |
EMSA, GST pull-down assay, reporter assay, stable transfection, cell proliferation assay |
The Journal of biological chemistry |
Medium |
11844790
|
| 2002 |
The DRED (direct repeat erythroid-definitive) repressor complex contains TR2 and TR4 as a heterodimer that binds DR1 sites in human embryonic ε-globin and fetal γ-globin gene promoters; DRED is a ~540 kDa complex; TR2/TR4 binding is reduced by an HPFH mutation in the DR1 site; forced transgenic TR2/TR4 expression reduces embryonic εy-globin transcription. |
Biochemical purification, mass spectrometry/sequence determination, EMSA, transgenic mouse model |
The EMBO journal |
High |
12093744
|
| 2002 |
A novel TR4-associated protein TRA16 (16 kDa, 139 amino acids, nuclear localization) selectively represses TR4-mediated transactivation by interacting with TR4 DNA-binding and ligand-binding domains; TRA16 reduces TR4 binding to TR4RE without inhibiting TR4 homodimerization; TRA16 blocks TR4-LBD interaction; the repression is TR4-selective (minimal effect on AR, GR, PR). |
Mammalian two-hybrid, Co-IP, EMSA, reporter assay, confocal microscopy |
The Journal of biological chemistry |
Medium |
12486131
|
| 2003 |
TR4 binds to a DR1 element (TR4RE-HBV) in the HBV core promoter and suppresses pre-core and core mRNA transcription; TR4 suppresses HBV core promoter by repressing HNF4α-mediated transactivation through protein-protein interaction (TR4 N- and C-terminal regions required), without inhibiting HNF4α DNA binding. |
EMSA, luciferase reporter assay, primer extension, co-immunoprecipitation, deletion/domain analysis |
The Journal of biological chemistry |
Medium |
12522137
|
| 2003 |
TR4 induces apoE gene expression via a TR4 response element in the hepatic control region 15 kb downstream of the apoE gene, and also regulates apoC-I and apoC-II expression via the same hepatic control region TR4RE; TR4 forms a complex with Sp1 for synergistic apoE induction via a proximal promoter DR0 element; TR4 knockout mice show significantly reduced serum apoE protein and liver apoE mRNA. |
Gel shift assay, luciferase reporter, TR4 knockout mice, quantitative analysis of serum/mRNA levels |
The Journal of biological chemistry |
High |
12954636
|
| 2004 |
TIP27, a novel 27 kDa zinc finger protein, interacts specifically with the TR4 ligand-binding domain (helix 3 to C-terminus) via its TAK1-interaction domain (residues Asp39–Lys79) and functions as a selective repressor of TR4/DR1-dependent transactivation without inhibiting TR4 homodimerization or DNA binding, suggesting repression via interference with co-activator recruitment. |
Yeast two-hybrid, mammalian two-hybrid, pull-down assay, confocal microscopy, reporter assay |
Nucleic acids research |
Medium |
15302918
|
| 2005 |
TR4 induces apoE expression in multiple cell lines via binding to a DR0 element (TR4RE-DR0-apoE at -303 to -292 bp) in the apoE 5' proximal promoter, and forms a complex with Sp1 to synergistically induce apoE expression. |
Gel shift assay, luciferase reporter assay, RT-PCR, Western blot |
Biochemical and biophysical research communications |
Low |
15670754
|
| 2007 |
TR2 and TR4 are stage-selective repressors of embryonic β-type globin genes in vivo: Tr2 and Tr4 null mutant mice show delayed silencing of εy and βh1 globins in definitive erythroid cells; dominant-negative TR4 activates human ε-globin in both primitive and definitive erythroid cells but activates γ-globin only in definitive cells; forced TR2/TR4 expression causes precocious ε-globin repression but paradoxically induces γ-globin in definitive erythroid cells. |
Knockout and transgenic mouse models, gene expression analysis |
The EMBO journal |
High |
17431400
|
| 2007 |
TR2 and TR4 directly repress Gata1/GATA1 transcription in murine and human erythroid progenitor cells through an evolutionarily conserved DR element in the GATA1 hematopoietic enhancer; TR2/TR4 binds this site in vitro and in vivo; mutation of the DR element elevates Gata1 promoter activity and reduces responsiveness to cotransfected TR2/TR4. |
Knockout and transgenic mouse models, ChIP, EMSA, reporter assay, shRNA knockdown in human CD34+ cells |
Genes & development |
High |
17974920
|
| 2007 |
TR4 knockout mice show significantly reduced PEPCK expression and impaired gluconeogenesis; TR4 transactivates the PEPCK promoter by direct binding to a TR4RE at -451 to -439 bp; TR4 knockdown in hepatocytes reduces glucose production; ectopic TR4 expression increases PEPCK expression and hepatic glucose production. |
Knockout mice, EMSA, ChIP, luciferase reporter assay, siRNA/RNAi in hepatocytes, glucose production assay |
Diabetes |
High |
17827404
|
| 2009 |
TR4 induces CD36 expression transcriptionally by binding to a TR4 response element in the CD36 5' promoter; this transactivation is enhanced by polyunsaturated fatty acids (omega-3/-6) and their metabolites (15-HETE, 13-HODE) and by rosiglitazone (TZD); TR4 knockout mice show reduced CD36 expression and foam cell formation; TR4 acts as a fatty acid sensor. |
TR4 knockout mice, EMSA, ChIP, siRNA knockdown, cDNA rescue, foam cell formation assay, reporter assay |
Proceedings of the National Academy of Sciences of the United States of America |
High |
19666541
|
| 2010 |
Crystal structure of the TR4 ligand-binding domain reveals an autorepressed conformation: the LBP is filled by the C-terminal half of helix 10 and the AF-2 helix occupies the cofactor binding site; retinol and retinoic acid promote TR4 to recruit coactivators and activate TR4-regulated reporters; mutations disrupting cofactor binding, dimerization, or ligand binding substantially reduce TR4 transcriptional activity. |
X-ray crystallography, coactivator recruitment assay, reporter assay, site-directed mutagenesis |
The Journal of biological chemistry |
High |
21068381
|
| 2010 |
TAK1/TR4 knockout mice are resistant to age- and high-fat-diet-induced metabolic syndrome; TR4 deficiency reduces hepatic triglyceride levels, lipid accumulation in adipose tissue, adipose inflammation, and insulin resistance; TR4 regulates lipogenic genes (Cidea, Cidec, Mogat1, CD36) in liver; TR4 knockout mice show increased energy expenditure. |
TR4 knockout mice, gene expression profiling, histochemical/biochemical analysis, metabolic studies, primary hepatocyte rescue experiments |
Diabetes |
High |
20864514
|
| 2010 |
Genome-wide ChIP-seq of TR4 in 4 human cell types shows that less than 30% of TR4 binding sites contain a DR1 motif (derived from in vitro studies), and ~30% of TR4 sites are co-occupied by the ETS factor ELK4 at sites lacking DR1, suggesting TR4 can be recruited to chromatin via protein-protein interaction with ETS factors. |
ChIP-seq, bioinformatics/motif analysis, ELK4 ChIP-seq |
BMC genomics |
Medium |
21126370
|
| 2011 |
TR2 and TR4 recruit multiple epigenetic corepressor complexes (DNMT1, NuRD, LSD1/CoREST, HDAC3, TIF1β) specifically to embryonic β-globin promoters but not the adult β-globin promoter in adult erythroid cells; at least four distinct TR2/TR4 molecular complexes exist; upon terminal erythroid differentiation, corepressors dissociate from adult but not embryonic globin promoters. |
ChIP, biotin-tag purification of TR2/TR4 complexes, mass spectrometry, co-immunoprecipitation, erythroid differentiation assays |
Molecular and cellular biology |
High |
21670149
|
| 2011 |
TR4 knockout mice develop mitochondrial myopathy with reduced complex I activity, decreased mitochondrial ATP production, and increased serum lactate; TR4 transcriptionally regulates the complex I assembly factor NDUFAF1; restoration of TR4 or NDUFAF1 in TR4-/- myoblasts rescues mitochondrial ATP generation and complex I activity. |
TR4 knockout mice, histology, ATP production assay, complex I activity assay, qPCR, promoter study, rescue experiments |
Molecular endocrinology (Baltimore, Md.) |
High |
21622535
|
| 2011 |
TR4 knockout mice show premature aging with increased genome instability and defective oxidative stress defense; TR4-/- MEFs show rapid growth arrest and reduced resistance to oxidative stress and DNA damage; restoring TR4 or adding antioxidant NAC reduces DNA damage in TR4-/- MEFs; TR4 loss alters genes in DNA damage response and anti-ROS pathways. |
TR4 knockout mice, MEF culture, DNA damage assays, qPCR array, NAC rescue, oxidative stress assays |
American journal of physiology. Endocrinology and metabolism |
Medium |
21521714
|
| 2011 |
ARA55 functions as a corepressor of TR4 by enhancing acetylation of TR4 at conserved lysine residues K175 and K176 in the DNA-binding domain via recruiting histone acetyltransferase activity, thereby significantly reducing TR4 DNA-binding activity and suppressing TR4 transactivation. |
Mutation analysis, co-IP, reporter assay, DNA binding assay |
The Journal of biological chemistry |
Medium |
21515881
|
| 2011 |
Forced TR2/TR4 expression in sickle cell disease model mice increases fetal hemoglobin (HbF) from 7.6% to 18.6% of total hemoglobin, increases hematocrit, reduces reticulocytes, and reduces hepatosplenomegaly, demonstrating that TR2/TR4 can paradoxically induce γ-globin in adult definitive erythroid cells. |
Transgenic mouse model (humanized sickle cell model), hemoglobin analysis, hematological measurements, histology |
Proceedings of the National Academy of Sciences of the United States of America |
High |
22042865
|
| 2011 |
TR4 transcriptionally regulates GADD45A through TR4 response elements located in intron 3 of the GADD45A gene; TR4 deficiency abrogates Gadd45a expression and increases IR-induced cell death; IR increases TR4 expression in normal but not TR4 knockdown cells. |
ChIP, luciferase reporter assay, qPCR, shRNA knockdown, TR4 knockout MEFs, irradiation assay |
Cellular & molecular biology letters |
Medium |
22396141
|
| 2012 |
TR4 knockout mice develop osteoporosis with reduced osteoblast activity; TR4 directly binds the promoter region of osteocalcin and induces its transcription; osteoblast progenitor cells from TR4 knockout mice show reduced differentiation and calcification with decreased expression of ALP, type I collagen α1, osteocalcin, PTH, and PTHR. |
TR4 knockout mice, bone analysis, primary osteoblast culture, alkaline phosphatase/alizarin red staining, luciferase reporter, ChIP, EMSA |
Reproductive biology and endocrinology : RB&E |
High |
22676849
|
| 2013 |
TR4 is overexpressed in human corticotroph tumors and transcriptionally activates proopiomelanocortin (POMC) via binding a DR1 response element in the POMC promoter; this activation is enhanced by MAPK-mediated TR4 phosphorylation; forced TR4 overexpression increases ACTH secretion, cellular proliferation, and tumor invasion in vitro and promotes corticotroph tumor growth in vivo. |
Overexpression/knockdown in cell lines, reporter assay, luciferase assay with MAPK inhibitors, xenograft mouse model, ACTH/corticosterone measurement |
Proceedings of the National Academy of Sciences of the United States of America |
High |
23653479
|
| 2013 |
TR4 promotes prostate cancer CD133+ stem/progenitor cell chemoresistance via a TR4→Oct4→IL1Ra axis; TR4 knockdown reduces Oct4 expression which reduces IL1Ra expression; restoring Oct4 or IL1Ra in TR4-knockdown cells reverses chemosensitivity. |
siRNA/lentiviral knockdown, drug sensitivity (IC50) assay, apoptosis assay, neutralization experiments |
The Journal of biological chemistry |
Medium |
23609451
|
| 2014 |
Mycobacterium tuberculosis keto-mycolic acid acts as a heterologous ligand for TR4, binding with energetically favorable thermodynamics (isothermal titration calorimetry); this keto-MA–TR4 interaction induces foamy macrophage formation and granuloma development in vitro and in vivo. |
Transactivation assay, promoter reporter assay, TLC, NMR, isothermal titration calorimetry, in vitro and in vivo granuloma models |
Journal of immunology (Baltimore, Md. : 1950) |
Medium |
24907344
|
| 2014 |
TR4 promotes prostate cancer metastasis by transcriptionally upregulating CCL2; ChIP and luciferase assays confirmed TR4 binding to the CCL2 promoter; CCR2 antagonist reverses TR4-enhanced PCa cell migration/invasion in vitro and PCa metastasis in orthotopic mouse model. |
siRNA/cDNA overexpression, migration/invasion assay, ChIP, luciferase assay, orthotopic xenograft mouse model |
International journal of cancer |
Medium |
24975468
|
| 2014 |
TR4 functions as a tumor suppressor during PCa initiation by transcriptionally regulating ATM expression; TR4 knockdown increases DNA damage and reduces ATM levels; ATM restoration partially reverses TR4-siRNA-induced tumorigenesis; three mouse models support TR4's suppressor role. |
TR4 knockout mouse models, siRNA knockdown, cell transformation assay, ATM rescue experiment, IHC, qPCR |
Carcinogenesis |
Medium |
24583925
|
| 2014 |
TR4 directly binds the pyruvate carboxylase (PC) promoter via a TR4 responsive element and increases PC gene expression and activity in 3T3-L1 adipocytes; TR4-mediated fatty acid synthesis requires PC activity, as siRNA knockdown of PC or PC inhibition abolishes TR4-enhanced fatty acid synthesis. |
Luciferase reporter assay, ChIP (implied by direct binding), siRNA, PC activity assay, radiolabeled carbon incorporation assay |
FEBS letters |
Medium |
25240193
|
| 2015 |
Compound conditional knockout of Tr2 and Tr4 in adult bone marrow cells leads to induced expression of embryonic εy and βh1 globins, confirms loss of TR2/TR4 occupancy at embryonic globin promoters and impairs co-occupancy by interacting corepressors; TR2/TR4 function is also required for terminal erythroid cell maturation. |
Conditional knockout mouse model, in vitro bone marrow differentiation, globin expression analysis, ChIP |
Blood |
High |
25561507
|
| 2015 |
TR4 increases prostate cancer invasion by decreasing miR-373-3p expression, which activates TGFβR2/p-Smad3 signaling; in vivo orthotopic mouse model confirmed TR4-increased PCa metastasis is mediated through decreased miR-373-3p. |
Overexpression/knockdown, invasion assay, miRNA expression analysis, orthotopic xenograft mouse model |
Oncotarget |
Low |
25980442
|
| 2015 |
TR4 transcriptionally regulates TIMP-1 and MMP2; knockdown of TR4 in PCa cells suppresses macrophage infiltration via increasing TIMP-1 with decreased MMP2; TIMP-1 neutralizing antibody reverses the effect, establishing TR4→MMP2/TIMP-1 axis in macrophage-mediated PCa invasion. |
siRNA knockdown, macrophage migration assay, invasion assay, TIMP-1 neutralization, IHC of patient samples |
Molecular cancer |
Low |
25623427
|
| 2017 |
SIRT7 deacetylates DDB1 at Lys1121, reducing its binding to DCAF1, thereby attenuating CUL4B/DDB1/DCAF1 E3 ubiquitin ligase activity and increasing TR4 protein levels; K1121R-DDB1 (deacetylation mimic) shows reduced DCAF1 binding and elevated TR4 and TR4 target gene expression (Cd36, Cidea, Cidec, Pparg1). |
Co-IP (SIRT7-DDB1 interaction), site-directed mutagenesis (K1121R), overexpression, Western blot, qPCR |
Biochemical and biophysical research communications |
Medium |
28623141
|
| 2017 |
TR4 plays a distinct individual role in erythroid development beyond TR2/TR4 redundancy: Tr4 null mutation in congenic C57BL/6 background causes early embryonic lethality (~E7.0); conditional Tr4 erythroid cells show failure to fully differentiate, diminished proliferation, decreased Alad and Alas2 (heme biosynthesis genes), and increased Cdkn1c expression. |
Conditional knockout mouse model, erythroid differentiation analysis, gene expression analysis |
Blood |
High |
29018082
|
| 2018 |
TR4 promotes ccRCC metastasis via the miR-32-5p/TR4/HGF/Met/MMP2-MMP9 axis; miR-32-5p suppresses TR4 protein by binding to the 3'UTR of TR4 mRNA; TR4 transcriptionally regulates HGF via direct binding to TR4RE on the HGF promoter; in vivo mouse model confirmed pathway. |
miR target binding assay (3'UTR), ChIP/reporter for TR4-HGF, invasion/migration assay, xenograft mouse model |
International journal of cancer |
Medium |
29396852
|
| 2018 |
TR4 promotes ccRCC vasculogenic mimicry (VM) and metastasis via miR490-3p/vimentin (VIM) signaling; TR4 decreases miR-490-3p by binding TR4-REs on its promoter, leading to increased VIM expression; preclinical mouse sub-renal capsule model confirmed the pathway. |
ChIP/reporter for TR4 on miR-490-3p promoter, 3'UTR targeting assay, VM assay, xenograft mouse model |
Oncogene |
Medium |
29973687
|
| 2019 |
TR4 modulates lncTASR (ENST00000600671.1) expression via transcriptional regulation; lncTASR increases AXL protein expression by enhancing AXL mRNA stability, conferring sunitinib resistance in RCC; bexarotene (a retinoid) antagonizes TR4, increasing sunitinib sensitivity. |
TR4 knockdown/overexpression, reporter assay, RNA stability assay, drug sensitivity assay, xenograft mouse model |
Oncogene |
Medium |
31501521
|
| 2020 |
Bexarotene directly interacts with TR4 ligand-binding domain, induces a conformational change in TR4-LBD secondary structure, and promotes TR4 translocation from nucleus to cytoplasm, thereby reducing TR4 binding to TR4RE on the POMC promoter and suppressing POMC expression and ACTH secretion; validated in vivo in mouse corticotroph tumor model. |
In silico virtual screening, structural modeling, TR4-LBD conformational assay, nuclear/cytoplasmic fractionation, ChIP/reporter assay, xenograft mouse model |
Journal of cellular and molecular medicine |
Medium |
33491272
|
| 2020 |
TR4 transcriptionally increases RNA-binding protein QKI expression; increased QKI elevates circZEB1, which sponges miR-141-3p to increase ZEB1 expression, conferring prostate cancer radioresistance; metformin combined with radiation suppresses PCa via this pathway. |
siRNA knockdown, reporter assay, RT-PCR, xenograft mouse model |
Cancer letters |
Low |
32768524
|
| 2023 |
NR2C2 activates NF-κB signaling in macrophages by binding DR elements in the promoter of the Nfκb gene, promoting expression of IL-1β and IL-6, and thereby inducing testicular inflammation (orchitis) and inhibiting spermatogonial proliferation. |
RNA interference in primary macrophages and RAW264.7, ChIP (implied by DR binding assay), inflammatory cytokine measurement, spermatogonia proliferation assay, LPS-induced orchitis mouse model |
Reproduction (Cambridge, England) |
Medium |
37427695
|
| 2024 |
TR4 and BCL11A competitively bind in vitro to distinct but overlapping sequences at the -117 position of the γ-globin promoter; TR4 represses γ-globin transcription and fetal hemoglobin in vivo independently of BCL11A; genome-wide ChIP shows BCL11A but not TR4 binds γ-globin promoters at statistically significant frequency in vivo, while both bind the locus control region. |
In vitro binding competition assay, in vivo functional studies, ChIP-seq |
Blood |
High |
39393056
|